Contig 004340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039I17Sequence623007998 (2)emb|CDP10006.1|2e-42unnamed protein product [Coffea canephora]859004340 (2)ref|XP_010325502.1|72.4PREDICTED: uncharacterized protein LOC104648963 [Solanum lycopersicum]
JMSF051E12Sequence665007998 (2)emb|CDP10006.1|7e-48unnamed protein product [Coffea canephora]731004340 (2)ref|XP_010325502.1|72.0PREDICTED: uncharacterized protein LOC104648963 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039I17+ TTCATCAATGGCGGAGGAC
                      ____________________________________________________________
consensus TTCATCAATGGCGGAGGAC
 
. : . : . : . : . : . :
rJMSF039I17+ CCTGAATTTAACAAGTTAGAGCCAAGGTCCTTCAGGTCTCAATCATTTACCAGACCTAAC
                      ____________________________________________________________
consensus CCTGAATTTAACAAGTTAGAGCCAAGGTCCTTCAGGTCTCAATCATTTACCAGACCTAAC
 
. : . : . : . : . : . :
rJMSF051E12+ CGCCGAAAAAACCA
rJMSF039I17+ TCCACCTCCCCTTCTCCAAACAAGCTTTCCCCTTCACCGTCGCCGTCGCCGAAAAAACCA
                      ____________________________________________________________
consensus TCCACCTCCCCTTCTCCAAACAAGCTTTCCCCTTCACCGTCGCCGTCGCCGAAAAAACCA
 
. : . : . : . : . : . :
rJMSF051E12+ TCCCCTTCACCGGAATCCTCCCAGCAGCTGAGGATTCTTGAAGAGATGGCGAGAAAGACG
rJMSF039I17+ TCCCCTTCACCGGAATCCTCCCAGCAGCTGAGGATTCTTGAAGAGATGGCGAGAAAGACG
                      ____________________________________________________________
consensus TCCCCTTCACCGGAATCCTCCCAGCAGCTGAGGATTCTTGAAGAGATGGCGAGAAAGACG
 
. : . : . : . : . : . :
rJMSF051E12+ AAGACGACTCCCGCTCCTCCCCCGCCGCCTCCCCATTATTTCCTCGGCAAGTCGTCGTCG
rJMSF039I17+ AAGACGACTCCCGCTCCTCCCCCGCCGCCTCCCCATTATTTCCTCGGCAAGTCGTCGTCG
                      ____________________________________________________________
consensus AAGACGACTCCCGCTCCTCCCCCGCCGCCTCCCCATTATTTCCTCGGCAAGTCGTCGTCG
 
. : . : . : . : . : . :
rJMSF051E12+ ATGAAATCAAGCGCGCTAGCCGCCAAGAAGAAGGAAGATTATGGGTCTTCTTCAGAGAAG
rJMSF039I17+ ATGAAATCAAGCGCGCTAGCCGCCAAGAAGAAGGAAGATTATGGGTCTTCTTCAGAGAAG
                      ____________________________________________________________
consensus ATGAAATCAAGCGCGCTAGCCGCCAAGAAGAAGGAAGATTATGGGTCTTCTTCAGAGAAG
 
. : . : . : . : . : . :
rJMSF051E12+ GAGCTGCGGCGAAGCGTTAGGAGTGTCCCGGCGGAAATACCAATACCCGACGAGGTGAAA
rJMSF039I17+ GAGCTGCGGCGAAGCGTTAGGAGTGTCCCGGCGGAAATACCAATACCCGACGAGGTGAAA
                      ____________________________________________________________
consensus GAGCTGCGGCGAAGCGTTAGGAGTGTCCCGGCGGAAATACCAATACCCGACGAGGTGAAA
 
. : . : . : . : . : . :
rJMSF051E12+ GGTGAAGAAGCTGCCGGGAAATCTGCAAGAACATTATCATTTACTCCGTTCAACGGGCGA
rJMSF039I17+ GGTGAAGAAGCTGCCGGGAAATCTGCAAGAACATTATCATTTACTCCGTTCAACGGGCGA
                      ____________________________________________________________
consensus GGTGAAGAAGCTGCCGGGAAATCTGCAAGAACATTATCATTTACTCCGTTCAACGGGCGA
 
. : . : . : . : . : . :
rJMSF051E12+ GGCAGGTCATATGCCATTGCAAAAGCCAAAGAAAATTTTGTGAAGAAAGAAGGCGAAGGG
rJMSF039I17+ GGCAGGTCATATGCCATTGCAAAAGCCAAAGAAAATTTTGTGAAGAAAGAAGGCGAAGGG
                      ____________________________________________________________
consensus GGCAGGTCATATGCCATTGCAAAAGCCAAAGAAAATTTTGTGAAGAAAGAAGGCGAAGGG
 
. : . : . : . : . : . :
rJMSF051E12+ GAAGGCGAAGAGTCAGAGATGGAAGACGAAGATGATTTCTTCGACGAGAATATGGTGGCA
rJMSF039I17+ GAAGGCGAAGAGTCAGAGATGGAAGACGAAGATGATTTCTTCGACGAGAATATGGTGGCA
                      ____________________________________________________________
consensus GAAGGCGAAGAGTCAGAGATGGAAGACGAAGATGATTTCTTCGACGAGAATATGGTGGCA
 
. : . : . : . : . : . :
rJMSF051E12+ GAAAATGGTAGTGAATATAACAGTAGTGGAGATGGAGGGCCGCCGGATGTTGATAAGAAA
rJMSF039I17+ GAAAATGGTAGTGAATATAACAGTAGTGGAGATGGAGGGCCGCCGGATGTTGATAAGAAA
                      ____________________________________________________________
consensus GAAAATGGTAGTGAATATAACAGTAGTGGAGATGGAGGGCCGCCGGATGTTGATAAGAAA
 
. : . : . : . : . : . :
rJMSF051E12+ GCTGACGAGTTTATAGCCAAATTTAGAGAGCAGATCAGACTGCAGAGGATTGAATCTATC
rJMSF039I17+ GCTGACGAGTTTATAGCCAAATTTAGAGAGCAGATCAGACTGCAGAGGATTGAATCTATC
                      ____________________________________________________________
consensus GCTGACGAGTTTATAGCCAAATTTAGAGAGCAGATCAGACTGCAGAGGATTGAATCTATC
 
. : . : . : . : . : . :
rJMSF051E12+ CGGCGATCGGCCGGCCAGACTGCAGCGGCTAGAAACCAGCTTGTAAGATGAGCTGAGGAG
rJMSF039I17+ CGGCGATCGGCCGGCCAGACTGCAGCGGCTAGAAACCAGCTTGTAAGATGAGCTGAGGAG
                      ____________________________________________________________
consensus CGGCGATCGGCCGGCCAGACTGCAGCGGCTAGAAACCAGCTTGTAAGATGAGCTGAGGAG
 
. : . : . : . : . : . :
rJMSF051E12+ GGCAGGCCGGCCTTCTGGGAGTTTATCAATTCTGCGTTTTCTTTTTTCTTTTCAATCCCA
rJMSF039I17+ GGCAGGCCGGCCTTCTGGGAGTTTATCAATTCTGCGTTTTCTTTTTTCTTTTCAATCCCA
                      ____________________________________________________________
consensus GGCAGGCCGGCCTTCTGGGAGTTTATCAATTCTGCGTTTTCTTTTTTCTTTTCAATCCCA
 
. : . : . : . : . : . :
rJMSF051E12+ TTATATTATGCATTAGAGAAAGCTTTCTTTTGTTTGTGATCAATC
rJMSF039I17+ TTATATTATGCATTAGAGAAAGCTTTCTTTTGTTTGTGATCAATCATGTTCCCCAAATTT
                      ____________________________________________________________
consensus TTATATTATGCATTAGAGAAAGCTTTCTTTTGTTTGTGATCAATCATGTTCCCCAAATTT