| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF027C11 | Sequence | 806 | 015765 | ref|XP_007159228.1| | 3e-22 | hypothetical protein PHAVU_002G2200001g, partial [Phaseolus vulgaris] gb|ESW3122 | 895 | 004336 (2) | ref|XP_009623818.1| | 1e-57 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 |
| JMSF038L24 | Sequence | 792 | 018989 | ref|XP_007159228.1| | 3e-22 | hypothetical protein PHAVU_002G2200001g, partial [Phaseolus vulgaris] gb|ESW3122 | 968 | 004336 (2) | ref|XP_009778629.1| | 122 | PREDICTED: uncharacterized protein LOC104227947 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF038L24+ TTTCCNCC
____________________________________________________________
consensus TTTCCNCC
. : . : . : . : . : . :
rJMSF038L24+ ATTTGGAAGAAGGANGCNTNCAGGTGAAATTCCCTTTTCCNCAAAGAAGCCNGGGCTCNT
____________________________________________________________
consensus ATTTGGAAGAAGGANGCNTNCAGGTGAAATTCCCTTTTCCNCAAAGAAGCCNGGGCTCNT
. : . : . : . : . : . :
rJMSF038L24+ TAGGGTGAGAGGCATCATTTTCACCTACAATTNTAGCAAGGGCCAAAGTCAGAAATCTTG
____________________________________________________________
consensus TAGGGTGAGAGGCATCATTTTCACCTACAATTNTAGCAAGGGCCAAAGTCAGAAATCTTG
. : . : . : . : . : . :
rJMSF038L24+ GCGTTCAATTCAGCATCCAGTAATATGTTACTCGCCTTCAGATCTCTANGNATAATTTTG
____________________________________________________________
consensus GCGTTCAATTCAGCATCCAGTAATATGTTACTCGCCTTCAGATCTCTANGNATAATTTTG
. : . : . : . : . : . :
rJMSF038L24+ AATCNGGAGTCCTGATGAAGATAAAGGAGTCCACGTGATATTCCCACAGCAATTTCAAAG
____________________________________________________________
consensus AATCNGGAGTCCTGATGAAGATAAAGGAGTCCACGTGATATTCCCACAGCAATTTCAAAG
. : . : . : . : . : . :
rJMSF027C11+ GAAGATGCTTCAGTTGAAT
rJMSF038L24+ CGTTTTTGCCAGCTTCAGAGTAGGATGTTTCCTCATTTGAAGAAGATGCTTCAGTTGAAT
____________________________________________________________
consensus CGTTTTTGCCAGCTTCAGAGTAGGATGTTTCCTCATTTGAAGAAGATGCTTCAGTTGAAT
. : . : . : . : . : . :
rJMSF027C11+ TCCTTTCCACAAAGAAGCCTGGCTCTTTAGGTTGAGAGCATCGTCTTCTCCTACAATTCT
rJMSF038L24+ TCCTTTCCACAAAGAAGCCTGGCTCTTTAGGTTGAGAGCATCGTNTTNTCCTACAATTCT
____________________________________________________________
consensus TCCTTTCCACAAAGAAGCCTGGCTCTTTAGGTTGAGAGCATCGTCTTCTCCTACAATTCT
. : . : . : . : . : . :
rJMSF027C11+ AGCAAGGCCAAAGTCTGAAATCTTGGCGTTCAATTCAGCATCCAGTAATATGTTACTTAC
rJMSF038L24+ AGCAAGGCCAAAGTNTGAAATCTTGGCGTTCAATTCAGCATCCAGTAATATGTTACTTAC
____________________________________________________________
consensus AGCAAGGCCAAAGTCTGAAATCTTGGCGTTCAATTCAGCATCCAGTAATATGTTACTTAC
. : . : . : . : . : . :
rJMSF027C11+ CTTCAGATCTCTATGTATAATTCTTAATCTGGCGTCCTGGTGAAGATAAAGGAGTCCACG
rJMSF038L24+ CTTCAGATCTCTATGTATAATTCTTAATCNGGNGTCCTGGNGAAGATAAAGGAGTCCACG
____________________________________________________________
consensus CTTCAGATCTCTATGTATAATTCTTAATCTGGCGTCCTGGTGAAGATAAAGGAGTCCACG
. : . : . : . : . : . :
rJMSF027C11+ TGATATTCCCACAGCAATTTCAAAGCGTTTTTGCCATGTAAGTATTCCTTTTCTGCTCTC
rJMSF038L24+ TGATATTCCCACAGCAATTTCAAAGCGTTTTTGCCATGTAAGTATTCCTTTTCTGCTCTC
____________________________________________________________
consensus TGATATTCCCACAGCAATTTCAAAGCGTTTTTGCCATGTAAGTATTCCTTTTCTGCTCTC
. : . : . : . : . : . :
rJMSF027C11+ ATCTGCATACATATTATTGTTGATTCG-TTTTTTTTTAGAAATTTAGTAGCTATATTGTC
rJMSF038L24+ ATCTGCATACATATTATTGNTGATTCGTTTTTTTTTTAGAAATTTAGTAGCTATATTGTC
____________________________________________________________
consensus ATCTGCATACATATTATTGTTGATTCGTTTTTTTTTTAGAAATTTAGTAGCTATATTGTC
. : . : . : . : . : . :
rJMSF027C11+ ACACTGCTGGTTTTTTTGATATAGAAGTCAAGAAAATCTAACCAAATATGAAGTAGTCCA
rJMSF038L24+ ACACTGCTGGTTTTTTTGATATAGAAGTCAAGAAAATCTAACCAAATATGAAGTAGTCCA
____________________________________________________________
consensus ACACTGCTGGTTTTTTTGATATAGAAGTCAAGAAAATCTAACCAAATATGAAGTAGTCCA
. : . : . : . : . : . :
rJMSF027C11+ AGCTATTATTTGGCATATATTCATATATTAGAATCCTTTGTCCTCCCTCGGCACAGCAAC
rJMSF038L24+ AGCTATTATTTGGCATATATTCATATATTAGAATCCTTTGTCCTCCCTCGGCACAGCAAC
____________________________________________________________
consensus AGCTATTATTTGGCATATATTCATATATTAGAATCCTTTGTCCTCCCTCGGCACAGCAAC
. : . : . : . : . : . :
rJMSF027C11+ CTTGAAGCGTAACGAGGTTTCTATGTTGAAGTTTTGCAATTATGCACACTTCATTCTCCC
rJMSF038L24+ CTTGAAGCGTAACGAGGTTTCTATGTTGAAGTTTTGCAATTATGCACACTTCATTCTCCC
____________________________________________________________
consensus CTTGAAGCGTAACGAGGTTTCTATGTTGAAGTTTTGCAATTATGCACACTTCATTCTCCC
. : . : . : . : . : . :
rJMSF027C11+ ACTCCTGAGCACCTTGGCCAGAATATTCAGAAAGCTTCTTGACCGCTATTTCTGTTCCAG
rJMSF038L24+ ACTCCTGAGCACCTTGGCCAGAATATTCAGAAAGCTTCTTGACCGCTATTTCTGTTCCAG
____________________________________________________________
consensus ACTCCTGAGCACCTTGGCCAGAATATTCAGAAAGCTTCTTGACCGCTATTTCTGTTCCAG
. : . : . : . : . : . :
rJMSF027C11+ TCGGTAGCTTACCCTGCAATAGTTTTACCAAAGCATGTAATACTGTCTTTGATTCCTCAG
rJMSF038L24+ TCGGTAGCTTACCCTGCAATAGTTTTACCAAAGCATGTAATACTGTCTTTGATTCCTCAG
____________________________________________________________
consensus TCGGTAGCTTACCCTGCAATAGTTTTACCAAAGCATGTAATACTGTCTTTGATTCCTCAG
. : . : . : . : . : . :
rJMSF027C11+ CATGACTAAAGAGCCCAAGTTTTGTGCAATTCAATACCTTGTAAAC
rJMSF038L24+ CATGACTAAAGAGCCCAAGTTTTGTGCAATTCAATACCTTGTAAACAGGTCCAAATCCAC
____________________________________________________________
consensus CATGACTAAAGAGCCCAAGTTTTGTGCAATTCAATACCTTGTAAACAGGTCCAAATCCAC