Contig 004335:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032I19Sequence668000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [746004335 (4)ref|XP_009767474.1|4e-35PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l
JMSF034M05Sequence430000836 (5)ref|XP_006361409.1|1e-04PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit 637004335 (4)gb|EYU19894.1|7e-09hypothetical protein MIMGU_mgv1a004196mg [Erythranthe guttata]
JMSF038I10Sequence667000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [888004335 (4)ref|XP_006606447.1|6e-52PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit
JMSF047D06Sequence669000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [798004335 (4)ref|XP_009767474.1|2e-41PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l

Alignment

This contig is upended


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rJMSF038I10+                      GTGCCAAATGATTGACATGATTAATCCAGAGAATGCCAGCTTTATTAC
                      ____________________________________________________________
consensus                         GTGCCAAATGATTGACATGATTAATCCAGAGAATGCCAGCTTTATTAC
 
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rJMSF047D06+                     TGAAGGGCAGCAAACTTTCAGGCAGTGTTTTCAACATTCTTTTTAACCT
rJMSF032I19+                                           CAGTGTTTTCAACATTCTTTTTAACCT
rJMSF038I10+          GTTACATGACTTGAAGGGCAGCAAACTTTCAGGCAGTGTTTTCAACATTCTTTTTAACCT
                      ____________________________________________________________
consensus             GTTACATGACTTGAAGGGCAGCAAACTTTCAGGCAGTGTTTTCAACATTCTTTTTAACCT
 
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rJMSF047D06+          CAACAAATTCATGGCATTTGAAACTCGTGATCCTTTCCTGATTCGTCAGGAGCGAGAGAA
rJMSF032I19+          CAACAAATTCATGGCATTTGAAACTCGTGATCCTTTCCTGATTCGTCAGGAGCGAGAGAA
rJMSF038I10+          CAACAAATTCATGGCATTTGAAACTCGTGATCCTTTCCTGATTCGTCAGGAGCGAGAGAA
                      ____________________________________________________________
consensus             CAACAAATTCATGGCATTTGAAACTCGTGATCCTTTCCTGATTCGTCAGGAGCGAGAGAA
 
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rJMSF047D06+          CCCAAATATGACCGAGTGGGATCGGTTTGCACACAGAGAATATATTAGGCTTTCAATGGA
rJMSF032I19+          CCCAAATATGACCGAGTGGGATCGGTTTGCACACAGAGAATATATTAGGCTTTCAATGGA
rJMSF034M05+                                       CACACAGAGAATATATTAGGCTTTCAATGGA
rJMSF038I10+          CCCAAATATGACCGAGTGGGATCGGTTTGCACACAGAGAATATATTAGGCTTTCAATGGA
                      ____________________________________________________________
consensus             CCCAAATATGACCGAGTGGGATCGGTTTGCACACAGAGAATATATTAGGCTTTCAATGGA
 
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rJMSF047D06+          GGAAGATGCTGAAGATGCCTCCAATGGAAGTCCTGATATGTGGGATGAATCACTTGAAGC
rJMSF032I19+          GGAAGATGCTGAAGATGCCTCCAATGAAAGTCCTGATATGTGGGATGAATCACTTGAAGC
rJMSF034M05+          GGAAGATGCTGAAGATGCCTCCAATGGAAGTCCTGATATGTGGGATGAATCACTTGAAGC
rJMSF038I10+          GGAAGATGCTGAAGATGCCTCCAATGGAAGTCCTGATATGTGGGATGAATCACTTGAAGC
                      ____________________________________________________________
consensus             GGAAGATGCTGAAGATGCCTCCAATGGAAGTCCTGATATGTGGGATGAATCACTTGAAGC
 
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rJMSF047D06+          TCCCTTTTAACTTTTTGTTGTTGGATACAAGGTATACAGAATCATGTTTGGCCTGGCTAT
rJMSF032I19+          TCCCTTTTAACTTTTTGTTGTTGGATACAAGGTATACAGAATCATGTTTGGCCTGGCTAT
rJMSF034M05+          TCCCTTTTAACTTTTTGTTGTTGGATACAAGGTATACAGAATCATGTTTGGCCTGGCTAT
rJMSF038I10+          TCCCTTTTAACTTTTTGTTGTTGGATACAAGGTATACAGAATCATGTTTGGCCTGGCTAT
                      ____________________________________________________________
consensus             TCCCTTTTAACTTTTTGTTGTTGGATACAAGGTATACAGAATCATGTTTGGCCTGGCTAT
 
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rJMSF047D06+          TGAACATCAAATGGCAAATTGTGCACACCAAATCTTCAAGGGGATGACCGGAGATGACTC
rJMSF032I19+          TGAACATCAAATGGCAAATTGTGCACNCCAAATCTTCAAGGGGATGACCGGAGATGACTC
rJMSF034M05+          TGAACATCAAATGGCAAATTGTGCACACCAAATCTTCAAGGGGATGACCGGAGATGACTC
rJMSF038I10+          TGAACATCAAATGGCAAATTGTGCACACCAAATCTTCAAGGGGATGACCGGAGATGACTC
                      ____________________________________________________________
consensus             TGAACATCAAATGGCAAATTGTGCACACCAAATCTTCAAGGGGATGACCGGAGATGACTC
 
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rJMSF047D06+          AGTCTGTCAAATTCACAAAAAAAATGAAAAAAAAAGGTCCCTTGAGATTGAGGGACAATT
rJMSF032I19+          AGTCTGTCAAATTCACAAAAAAAATGAAAAAAAAAGGTCCCTTGAGATTGAGGGACAATT
rJMSF034M05+          AGTCTGTCAAATTCACAAAAAAAATGAAAAAAAAAGGTCCCTTGAGATTGAGGGACAANT
rJMSF038I10+          AGTCTGTCAAATTCACAAAAAAAATGAAAAAAAAAGGTCCCTTGAGATTGAGGGACAATT
                      ____________________________________________________________
consensus             AGTCTGTCAAATTCACAAAAAAAATGAAAAAAAAAGGTCCCTTGAGATTGAGGGACAATT
 
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rJMSF047D06+          GATAATTCCTTCTACACAGAACTTGTTAACCAAGTAAAGTTTCATACTACACAGAAGCTC
rJMSF032I19+          GATAATTCCTTCTACACAGAACTTGTTAACCAAGTAAAGTTTCATACTACACAGAAGCTC
rJMSF034M05+          GATAATTCCTTCTACACAGAACTTGTTAACCAAGTAAAGTTTCATACTACACAGAAGCTC
rJMSF038I10+          GATAATTCCTTCTACACAGAACTTGTTAACCAAGTAAAGTTTCATACTACACAGAAGCTC
                      ____________________________________________________________
consensus             GATAATTCCTTCTACACAGAACTTGTTAACCAAGTAAAGTTTCATACTACACAGAAGCTC
 
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rJMSF047D06+          CTAGCTTGAATACCGAGTCTCTTGGCAAGTCACACGCAAATGGTGTGATTAAACAGAAAC
rJMSF032I19+          CTAGCTTGAATACCGAGTCTCTTGGCAAGTCACACGCAAATGGTGTGATTAAACAGAAAC
rJMSF034M05+          CTAGCTTGAATACCGAGTCTCTTGGCAAGTCACACGCAAATGGTGTGATTAAACAGAAAC
rJMSF038I10+          CTAGCTTGAATACCGAGTCTCTTGGCAAGTCACACGCAAATGGTGTGATTAAACAGAAAC
                      ____________________________________________________________
consensus             CTAGCTTGAATACCGAGTCTCTTGGCAAGTCACACGCAAATGGTGTGATTAAACAGAAAC
 
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rJMSF047D06+          AGAGTCTTGTTCACAACTTGTAGAACTTTGTTCTTTGTCTAGATGTAAGGAACCACACTT
rJMSF032I19+          AGAGTCTTGTTCACAACTTGTAGAACTTTGTTCTTTGTCTAGATGTAAGGAACCACACTT
rJMSF034M05+          AGAGTCTTGTTCACAACTTGTAGAACTTTGTTCTTNGTCTAGATGTAAGGAACCACACTT
rJMSF038I10+          AGAGTCTTGTTCACAACTTGTAGAACTTTGTTCTTTGTCTAGATGTAAGGAACCACACTT
                      ____________________________________________________________
consensus             AGAGTCTTGTTCACAACTTGTAGAACTTTGTTCTTTGTCTAGATGTAAGGAACCACACTT
 
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rJMSF047D06+          GTTACTTGTTCTAGATAGTGCTTCCAAGAATGTTTTTCTTATAAGTGGTTCAGCTTTTCT
rJMSF032I19+          GTTACTTGTTCTAGATAGTGCTTCCAAGAATGTTTTTCTTATAAGTGGTTCAGCTTTTCT
rJMSF034M05+          GTTACTTGTTCTAGATAGTGCTTCCAAGAATGTTTTTCTTATAAGTGGTTCAGCTTTTCT
rJMSF038I10+          GTTACTTGTTCTAGATAGTGCTTCCAAGAATGTTTTTCTTATAAGTGGTTCAGCTTTTCT
                      ____________________________________________________________
consensus             GTTACTTGTTCTAGATAGTGCTTCCAAGAATGTTTTTCTTATAAGTGGTTCAGCTTTTCT
 
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rJMSF047D06+          TTTTTTGGTTGGTATATACAGGTTCGGTTTGTTAGGTTGTAAGGTTTCGTCTGTTTTTCA
rJMSF032I19+          TTTTTTGGTTGGTATATACAGGTTCGGTTTGTTAGGTTGTAAGGTTTCGTCTGTTTTTCA
rJMSF034M05+          TTTTTTGGTTGGTATATACAGGTTCGGTTTGTTAGGTTGTAAGGTTTCGTCTGTTTTTCA
rJMSF038I10+          TTTTTTGGTTGGTATATACAGGTTCGGTTTGTTAGGTTGTAAGGTTTCGTCTGTTTTTCA
                      ____________________________________________________________
consensus             TTTTTTGGTTGGTATATACAGGTTCGGTTTGTTAGGTTGTAAGGTTTCGTCTGTTTTTCA
 
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rJMSF047D06+          CCTTTCTTTTCTTTGCAATTGAGACATTCATAGCAGCCTGAATAGTTGTGGCAGCC    
rJMSF032I19+          CCTTTCTTTTCTTTGCAATTGAGACATTCATAGCA                         
rJMSF034M05+          CCTTTCTTTTCTTTGCAATTGAGACATTCATAGCAGCCTGAATAGTTGTGGCAGCC    
rJMSF038I10+          CCTTTCTTTTCTTTGCAATTGAGACATTCATAGCAGCCTGAATAGTTGTGGCAGCCATGT
                      ____________________________________________________________
consensus             CCTTTCTTTTCTTTGCAATTGAGACATTCATAGCAGCCTGAATAGTTGTGGCAGCCATGT
 
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rJMSF038I10+          GTAATGATATTTTCCATTGCCCAATACTTAGTTATAGTAATCTGTTTCTAATGTAATGGG
                      ____________________________________________________________
consensus             GTAATGATATTTTCCATTGCCCAATACTTAGTTATAGTAATCTGTTTCTAATGTAATGGG