Contig 004330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019C20Sequence459000716 (2)gb|KCW73752.1|4e-11hypothetical protein EUGRSUZ_E023601, partial [Eucalyptus grandis] gb|KCW73753.1856004330 (2)ref|XP_006355597.1|2e-93PREDICTED: C-terminal processing peptidase, chloroplastic-like [Solanum tuberos
JMSF037M24Sequence638000716 (2)ref|XP_002271932.1|3e-37PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic [Vitis vinif593004330 (2)ref|XP_010316906.1|2e-40PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [

Alignment

This contig is upended


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rJMSF019C20+                   TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
                      ____________________________________________________________
consensus                      TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
 
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rJMSF019C20+          ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
                      ____________________________________________________________
consensus             ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
 
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rJMSF019C20+          GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
                      ____________________________________________________________
consensus             GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
 
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rJMSF019C20+          ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
                      ____________________________________________________________
consensus             ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
 
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rJMSF019C20+          ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
                      ____________________________________________________________
consensus             ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
 
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rJMSF019C20+          ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
rJMSF037M24+                 TTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
                      ____________________________________________________________
consensus             ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
 
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rJMSF019C20+          CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
rJMSF037M24+          CTGATTCAATCTGTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
                      ____________________________________________________________
consensus             CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
 
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rJMSF019C20+          TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
rJMSF037M24+          TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
                      ____________________________________________________________
consensus             TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
 
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rJMSF019C20+          CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
rJMSF037M24+          CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
                      ____________________________________________________________
consensus             CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
 
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rJMSF019C20+          TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
rJMSF037M24+          TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
                      ____________________________________________________________
consensus             TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
 
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rJMSF019C20+          CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
rJMSF037M24+          CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
                      ____________________________________________________________
consensus             CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
 
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rJMSF019C20+          ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
rJMSF037M24+          ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
                      ____________________________________________________________
consensus             ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
 
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rJMSF019C20+          AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
rJMSF037M24+          AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
                      ____________________________________________________________
consensus             AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
 
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rJMSF019C20+          GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
rJMSF037M24+          GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
                      ____________________________________________________________
consensus             GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
 
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rJMSF019C20+          ATATTGATGTCCATACAGAATCAGA                                   
rJMSF037M24+          ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC
                      ____________________________________________________________
consensus             ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC