Contig 004329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009A02Sequence300010876 (5)emb|CBI19087.3|2e-36unnamed protein product [Vitis vinifera]782004329 (4)ref|XP_009799724.1|7e-41PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve
JMSF033O12Sequence713010876 (5)ref|XP_009799724.1|3e-140PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve700004329 (4)ref|XP_009799724.1|2e-35PREDICTED: vacuolar protein sorting-associated protein 9A-like [Nicotiana sylve
JMSF037K19Sequence641010876 (5)ref|XP_011074892.1|3e-103PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Sesa656004329 (4)gb|EYU22898.1|8e-34hypothetical protein MIMGU_mgv1a005391mg [Erythranthe guttata]
JMSF044L04Sequence754010876 (5)ref|XP_011074892.1|1e-125PREDICTED: vacuolar protein sorting-associated protein 9A-like isoform X2 [Sesa686004329 (4)gb|EYU22898.1|8e-35hypothetical protein MIMGU_mgv1a005391mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF009A02+                 TTGAAAGTAATATGCCATNTGCTCAAGCAGTTCTTTACNGCCTTTCAGCAGAC
                      ____________________________________________________________
consensus                    TTGAAAGTAATATGCCATNTGCTCAAGCAGTTCTTTACNGCCTTTCAGCAGAC
 
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rJMSF009A02+          TCGGNTGATATAATTAGTCATAATACCCAGAATGCTGGAGAAGCTGTGGCACCTAAACAG
                      ____________________________________________________________
consensus             TCGGNTGATATAATTAGTCATAATACCCAGAATGCTGGAGAAGCTGTGGCACCTAAACAG
 
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rJMSF009A02+          GCGGTGAACACAAACAACCGCCAAGCCTCTGGTTTGCCGCCTGAGTTTACCATTGAGCCA
rJMSF033O12+               GAACACAAACAACCGCCAAGCCTNTGGNTTGCCGCCTGAGTTTACCATTGAGCCA
rJMSF044L04+                                           TTGCCGCCTGAGTTTACCATTGAGCCA
                      ____________________________________________________________
consensus             GCGGTGAACACAAACAACCGCCAAGCCTCTGGTTTGCCGCCTGAGTTTACCATTGAGCCA
 
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rJMSF009A02+          TCTGAAACTAAACCCAGAAACGAGGACCAGTATGTGAAGGATCATCAGCCTTCAACTGAT
rJMSF033O12+          TCTGAAACTAAACCCAGAAACGAGGACCAGTATGTGAAGGATCATCAGCCTTCAACTGAT
rJMSF044L04+          TCTGAAACTAAACCCAGAAACGAGGACCATTATGTGAAGGATCATCAGCCTTCAACTGAT
rJMSF037K19+              AAACTAAACCCAGAAACGAGGACCAGTATGTGAAGGATCATCAGCCTTCAACTGAT
                      ____________________________________________________________
consensus             TCTGAAACTAAACCCAGAAACGAGGACCAGTATGTGAAGGATCATCAGCCTTCAACTGAT
 
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rJMSF009A02+          AAAACTCCATCGATCTCAGATCTAGAAAATAAAGGGGCAGCTATGATTACAAAGGAGGAC
rJMSF033O12+          AAAACTCCATCGATCTCAGATCTAGAAAATAAAGGGGCAGCTATGATTACAAAGGAGGAC
rJMSF044L04+          AAAACTCCATCGATCTCAGATCTAGAAAATAAAGGGGCAGCTATGATTACAAAGGAGGAC
rJMSF037K19+          AAAACTCCATCGATCTCAGATCTAGAAAATAAAGGGGCAGCTATGATTACAAAGGAGGAC
                      ____________________________________________________________
consensus             AAAACTCCATCGATCTCAGATCTAGAAAATAAAGGGGCAGCTATGATTACAAAGGAGGAC
 
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rJMSF009A02+          AACGCAGACGACTTCTTTCGAAATTTCCCTTATTTCTACTCTCAGGCTGGTGTCTTAACC
rJMSF033O12+          AACGCAGACGACTTCTTTCGAAATTTCCCTTATTTCTACTCTCAGGCTGGTGTNTTAACC
rJMSF044L04+          AACGCAGACGACTTCTTTCGAAATTTCCCTTATTTCTACTCTCAGGCTGGTGTNTTAACC
rJMSF037K19+          AACGCAGACGACTTCTTTCGAAATTTCCCTTATTTCTACTCTCAGGCTGGTGTCTTAACC
                      ____________________________________________________________
consensus             AACGCAGACGACTTCTTTCGAAATTTCCCTTATTTCTACTCTCAGGCTGGTGTCTTAACC
 
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rJMSF009A02+          GTCGGGGATGTCGAAGAACTGTTGAGTAACTACAAGCAACTCGTATTCAAATATGTCTGT
rJMSF033O12+          GTCGGGGATGTCGAAGAACTGTTGAGTAACTACAAGCAACTCGTATTCAAATATGTCTGT
rJMSF044L04+          GTCGGGGATGTCGAAGAACTGTTGAGTAACTACAAGCAACTCGTATTCAAATATGTCTGT
rJMSF037K19+          GTCGGGGATGTCGAAGAACTGTTGAGTAACTACAAGCAACTCGTATTCAAATATGTCTGT
                      ____________________________________________________________
consensus             GTCGGGGATGTCGAAGAACTGTTGAGTAACTACAAGCAACTCGTATTCAAATATGTCTGT
 
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rJMSF009A02+          CTTTCTAAAGGGCTGGGTATTGATGTTCCATCTCCATCATTATCTGAAAGTGTTGCAGAA
rJMSF033O12+          CTTTCTAAAGGGCTGGGTATTGATGTTCCATCTCCATCATTATCTGAAAGTGTTGCAGAA
rJMSF044L04+          CTTTCTAAAGGGCTGGGTATTGATGTTCCATCTCCATCATTATCTGAAAGTGTTGCAGAA
rJMSF037K19+          CTTTCTAAAGGGCTGGGTATTGATGTTCCATCTCCATCATTATCTGAAAGTGTTGCAGAA
                      ____________________________________________________________
consensus             CTTTCTAAAGGGCTGGGTATTGATGTTCCATCTCCATCATTATCTGAAAGTGTTGCAGAA
 
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rJMSF009A02+          CCAGAAGGCGATGAGACACAGAAACNCCNCCCTACCGCAGATAGTGACAGTAGTGGAATT
rJMSF033O12+          CCNGAAGGCGATGAGACNCAGAAACNCCNCCCTACCGCAGATAGTGACAGTAGTGGAATT
rJMSF044L04+          CCAGAAGGCGATGAGACACAGAAACNCCNCCCTACCGCAGATAGTGACAGTAGTGGAATT
rJMSF037K19+          CCNGAAGGCGATGAGACACAGAAACNCCNCCCTACCGCAGATAGTGACAGTAGTGGAATT
                      ____________________________________________________________
consensus             CCAGAAGGCGATGAGACACAGAAACNCCNCCCTACCGCAGATAGTGACAGTAGTGGAATT
 
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rJMSF009A02+          CCTATCGTCAACGAGCATGATTCAGAATCCAATTTACTAGTAGATGAAGCTGTTACTAGT
rJMSF033O12+          CCTATCGTCAACGAGCNTGATTCAGAATCCAATTTACTAGTAGATGAAGCTGTTACTAGT
rJMSF044L04+          CCTATCGTCAACGAGCATGATTCAGAATCCAATTTACTAGTAGATGAAGCTGTTACTAGT
rJMSF037K19+          CCTATCGTCAACGAGCATGATTCAGAATCCAATTTACTAGTAGATGAAGCTGTTACTAGT
                      ____________________________________________________________
consensus             CCTATCGTCAACGAGCATGATTCAGAATCCAATTTACTAGTAGATGAAGCTGTTACTAGT
 
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rJMSF009A02+          AAAGATGGGGAAGGGGTTGATGACTGATGAGGCTTCTTAGTGATAGTTGACATGTAAAGC
rJMSF033O12+          AAAGATGGGGAAGGGGTTGATGACTGATGAGGCTTCTTAGTGATAGTTGACATGTAAAGC
rJMSF044L04+          AAAGATGGGGAAGGGGTTGATGACTGATGAGGCTTCTTAGTGATAGTTGACATGTAAAGC
rJMSF037K19+          AAAGATGGGGAAGGGGTTGATGACTGATGAGGCTTCTTAGTGATAGTTGACATGTAAAGC
                      ____________________________________________________________
consensus             AAAGATGGGGAAGGGGTTGATGACTGATGAGGCTTCTTAGTGATAGTTGACATGTAAAGC
 
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rJMSF009A02+          TCATGTAAAATCATGTAACTTGCAATGTGGCCNCTAGGTGCTTGTCTTTGTACNCTAGGC
rJMSF033O12+          TCATGTAAAATCATGTAACTTGCAATGTGGCCNCTAGGTGCTTGTCTTTGTACNCTAGGC
rJMSF044L04+          TCATGTAAAATCATGTAACTTGCAATGTGGCCCCTAGGTGCTTGTCTTTGTACNCTAGGC
rJMSF037K19+          TCATGTAAAATCATGTAACTTGCAATGTGGCCNCTAGGTGCTTGTCTTTGTACNCTAGGC
                      ____________________________________________________________
consensus             TCATGTAAAATCATGTAACTTGCAATGTGGCCCCTAGGTGCTTGTCTTTGTACNCTAGGC
 
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rJMSF009A02+          TGCAAATTAGGTACCATATCTATTTAGGTACATCATTTTTTTTTTCTTCTTCTATTTTCT
rJMSF033O12+          TGCAAATTAGGTACCATATCTATTTAGGTACATCATTTTTTTTTTCTTCTTCTATTTTCT
rJMSF044L04+          TGCAAATTAGGTACCATATCTATTTAGGTACNTCATTTTTTTTTTCTTCTTCTATTTTCT
rJMSF037K19+          TGCAAATTAGGTACCATATCTATTTAGGTACNTCATTTTTTTTTTCTTCTTCTATTTTCT
                      ____________________________________________________________
consensus             TGCAAATTAGGTACCATATCTATTTAGGTACATCATTTTTTTTTTCTTCTTCTATTTTCT
 
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rJMSF009A02+          AAAGATTTT                                                   
rJMSF033O12+          AAAGATTTTTATGTTTTCATTTTATGTTGGAAATTTAGAAAA                  
rJMSF044L04+          AAAGATTTTTATGTTTTCATTTTATGTTGGAAATTTAGAAAAACTTGTGGAAATTC    
rJMSF037K19+          AAAGATTTTTATGTTTTCATTTTATGTTGGAAATTTAGAAAACCTTGTGGAAATTCAATT
                      ____________________________________________________________
consensus             AAAGATTTTTATGTTTTCATTTTATGTTGGAAATTTAGAAAACCTTGTGGAAATTCAATT