Contig 004325:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037E04-                                                                    GGA
                      ____________________________________________________________
consensus                                                                      GGA
 
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JMSF002M14-             CTTGGCGTCATGTGTATGACATGAGAAACTGGATTGAAGAAACCATGGAAAGGTGGTG
JMSF037E04-           TACTTGGCGTCATGTGTATGACATGAGAAACTGGATTGAAGAAACCATGGAAAGGTGGTG
                      ____________________________________________________________
consensus             TACTTGGCGTCATGTGTATGACATGAGAAACTGGATTGAAGAAACCATGGAAAGGTGGTG
 
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JMSF002M14-           ATCTCATATAGTGATATGTGAGAGAACAGTTGGTTCAGGTTCAAGGTTTTATATATTGTA
JMSF037E04-           ATCTCATATAGTGATATGTGAGAGAACAGTTGGTTCAGGTTCAAGGTTTTATATATTGTA
                      ____________________________________________________________
consensus             ATCTCATATAGTGATATGTGAGAGAACAGTTGGTTCAGGTTCAAGGTTTTATATATTGTA
 
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JMSF002M14-           AAAATTCTTGAAATCTACGTGGGAATGGTGGATGAAGAGGTTGATTTTGTAAGGTTTGCA
JMSF037E04-           AAAATTCTTGAAATCTACGTGGGAATGGTGGATGAAGAGGTTGATTTTGTAAGGTTTGCA
                      ____________________________________________________________
consensus             AAAATTCTTGAAATCTACGTGGGAATGGTGGATGAAGAGGTTGATTTTGTAAGGTTTGCA
 
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JMSF002M14-           ACTTGCACTCATGCAAAGGCTGAGTGTTCTTGGTTGTAAGGCCTCTTTTGGCTTTGGGAG
JMSF037E04-           ACTTGCACTCATGCAAAGGCTGAGTGTTCTTGGTTGTAAGGCCTCTTTTGGCTTTGGGAG
                      ____________________________________________________________
consensus             ACTTGCACTCATGCAAAGGCTGAGTGTTCTTGGTTGTAAGGCCTCTTTTGGCTTTGGGAG
 
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JMSF002M14-           AAGCTTTAATGATCAAAAACTAGGTTGTTTAGCTGGATCAATATTGCCCATTATACGTAA
JMSF037E04-           AAGCTTTAATGATCAAAAACTAGGTTGTTTAGCTGGATCAATATTGCCCATTATACGTAA
rJMSF002M14+                                          CTGGATCAATATTGCCCATTATACGTAA
                      ____________________________________________________________
consensus             AAGCTTTAATGATCAAAAACTAGGTTGTTTAGCTGGATCAATATTGCCCATTATACGTAA
 
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JMSF002M14-           AAATGCTATTGAGTCTTGTTATATAAAGACACGAGGTGTGTTTA                
JMSF037E04-           AAATGCTATTGAGTCTTGTTATATAAAGACACGAGGTGTGTTTAGGCTTGGAAATGTCGA
rJMSF002M14+          AAATGCTATTGAGTCTTGTTATATAAAGACACGAGGTGTGTTTAGGCTTGGAAATGTCGA
rJMSF037E04+                                                          TGGAAATGTCGA
                      ____________________________________________________________
consensus             AAATGCTATTGAGTCTTGTTATATAAAGACACGAGGTGTGTTTAGGCTTGGAAATGTCGA
 
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JMSF037E04-           GAAACAAATTTGTGCAGTTAGGTCCTCGAGGATATGGAGTGTGAATAATGATAATGTTGA
rJMSF002M14+          GAAACAAATTTGTGCAGTTTGGTCCTCGAGGATATGGAGTGTGAATAATGATAATGTTGA
rJMSF037E04+          GAAACAAATTTGTGCAGTTANGTCCTCGAGGATATGGAGTGTGAATAATGATAATGTTGA
                      ____________________________________________________________
consensus             GAAACAAATTTGTGCAGTTAGGTCCTCGAGGATATGGAGTGTGAATAATGATAATGTTGA
 
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JMSF037E04-           TGAATTATTTAATGGCGGTGGTGATGAAGATGATGATGATGAGTTGTGCCCGGTTGAATG
rJMSF002M14+          TGAATTATTTAATGGCGGTGGTGATGAAGATGATGATGATGAGTTGTGCCCGGTTGAATG
rJMSF037E04+          TGAATTATTTAATGGCGGTGGTGATGAAGATGATGATGATGAGTTGTGCCCGGTTGAATG
                      ____________________________________________________________
consensus             TGAATTATTTAATGGCGGTGGTGATGAAGATGATGATGATGAGTTGTGCCCGGTTGAATG
 
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JMSF037E04-           CGTGAGAGAATTTAACACGGATGAGGAATTCTCGAGAATAATGGAGAAGGCAAAGCAAAC
rJMSF002M14+          CGTGAGAGAATTTAACACGGATGAGGAATTCTCGAGAATAATGGAGAAGGCAAAGCAAAC
rJMSF037E04+          CGTGAGAGAATTTAACACGGATGAGGAATTCTCGAGAATAATGGAGAAGGCAAAGCAAAC
                      ____________________________________________________________
consensus             CGTGAGAGAATTTAACACGGATGAGGAATTCTCGAGAATAATGGAGAAGGCAAAGCAAAC
 
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JMSF037E04-           TGGCGCTCTGGTTGTGGTGGACTTCTACCGCACGTCTTGTGGCAGCTGCAAGTACATCGA
rJMSF002M14+          TGGCGCTCTGGTTGTGGTGGACTTCTACCGCACGTCTTGTGGCAGCTGCAAGTACATCGA
rJMSF037E04+          TGGCGCTCTGGTTGTGGTGGACTTCTACCGCACGTCTTGTGGCAGCTGCAAGTACATCGA
                      ____________________________________________________________
consensus             TGGCGCTCTGGTTGTGGTGGACTTCTACCGCACGTCTTGTGGCAGCTGCAAGTACATCGA
 
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JMSF037E04-           GCAGGGATTCGTGAAGCTCTGCAAGGGATCCGGTGA                        
rJMSF002M14+          GCAGGGATTCGTGAAGCTCTGCAAGGGATCCGGTGACGAAGAGGCACCCGTTGTTTTCTT
rJMSF037E04+          GCAGGGATTCGTGAAGCTCTGCAAGGGATCCGGTGACGAAGAGGCACCCGTTGTTTTCTT
                      ____________________________________________________________
consensus             GCAGGGATTCGTGAAGCTCTGCAAGGGATCCGGTGACGAAGAGGCACCCGTTGTTTTCTT
 
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rJMSF002M14+          GAAACACAATGTGCTTGATGAGTACGATGAACAATCCGAGGTTGCAGAACGCCTTCGAAT
rJMSF037E04+          GAAACACAATGTGCTTGATGAGTACGATGAACAATCCGAGGTTGCAGAACGCCTTCGAAT
                      ____________________________________________________________
consensus             GAAACACAATGTGCTTGATGAGTACGATGAACAATCCGAGGTTGCAGAACGCCTTCGAAT
 
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rJMSF002M14+          CAGGTCTGTGCCCCTCTTTCATTTCTACAAGAACGGAGTGCTACTCGAAGCGTTTCCTAC
rJMSF037E04+          CAGGTCTGTGCCCCTCTTTCATTTCTACAAGAACGGAGTGCTACTCGAAGCGTTTCCTAC
                      ____________________________________________________________
consensus             CAGGTCTGTGCCCCTCTTTCATTTCTACAAGAACGGAGTGCTACTCGAAGCGTTTCCTAC
 
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rJMSF002M14+          ACGTGATAAAGAGAGGATACTTTCAGCCATTCTTAAATACTCGGGTTCTTCTCCTCAAGA
rJMSF037E04+          ACGTGATAAAGAGAGGATACTTTCAGCCATTCTTAAATACTCGGGTTCTTCTCCTCAAGA
                      ____________________________________________________________
consensus             ACGTGATAAAGAGAGGATACTTTCAGCCATTCTTAAATACTCGGGTTCTTCTCCTCAAGA
 
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rJMSF002M14+          TGCTTGAGTTGATGATCTGGTTTGCATTTAGACCTTTAGAAATAATAGTCCAGAATATTT
rJMSF037E04+          TGCTTGAGTTGATGATCTGGTTTGCATTTAGACCTTTAGAAATAATAGTCCAGAATATTT
                      ____________________________________________________________
consensus             TGCTTGAGTTGATGATCTGGTTTGCATTTAGACCTTTAGAAATAATAGTCCAGAATATTT
 
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rJMSF002M14+          TGCCTTTGTACCTTATTATTCTTGGTGCTCAATACTAACGCTGGGCGCCCCTCCACGGTT
rJMSF037E04+          TGCCTTTGTACCTTATTATTCTTGGTGCTCAATACTAACGCTGGGCGCCCCTCCACGGTT
                      ____________________________________________________________
consensus             TGCCTTTGTACCTTATTATTCTTGGTGCTCAATACTAACGCTGGGCGCCCCTCCACGGTT
 
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rJMSF002M14+          TTCGTTTCCTTGAAATTGGAATT                                     
rJMSF037E04+          TTCGTTTCCTTGAAATTGGAATTTGTAACGTTGTACCGGCATCTATGTTTTGGAGAAATT
                      ____________________________________________________________
consensus             TTCGTTTCCTTGAAATTGGAATTTGTAACGTTGTACCGGCATCTATGTTTTGGAGAAATT
 
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rJMSF037E04+          TATGTCATTTGTTCTCATGTTCTTCTGTCATGAGCATATTTTTCTCTTTGCAAAAAGTTT
                      ____________________________________________________________
consensus             TATGTCATTTGTTCTCATGTTCTTCTGTCATGAGCATATTTTTCTCTTTGCAAAAAGTTT