Contig 004323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036D12Sequence643010431 (3)ref|XP_004238681.1|2e-81PREDICTED: uncharacterized protein LOC101255990 isoform X1 [Solanum lycopersicu720004323 (2)ref|XP_011086534.1|221PREDICTED: uncharacterized protein LOC105168236 [Sesamum indicum]
JMSF036M22Sequence655010431 (3)ref|XP_004238681.1|7e-83PREDICTED: uncharacterized protein LOC101255990 isoform X1 [Solanum lycopersicu712004323 (2)ref|XP_009605912.1|2e-64PREDICTED: uncharacterized protein LOC104100399 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF036D12+                                                                    AA
                      ____________________________________________________________
consensus                                                                       AA
 
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rJMSF036D12+          TCCGTATGAGAAACCACTCATGTCATCAGTAATGCCGCCCCTAATTCCACCTGATAATGC
rJMSF036M22+                 GAGAAACCACTCATGTCATCAGTNATGCCGCCCCTAATTCCACCTGATAATGC
                      ____________________________________________________________
consensus             TCCGTATGAGAAACCACTCATGTCATCAGTAATGCCGCCCCTAATTCCACCTGATAATGC
 
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rJMSF036D12+          TGAAGAGAAGCAAGAAGAAAGCTTCTTTGGATCTTTGGGAAAGCTGCTGGCTCAGGCGGG
rJMSF036M22+          TGAAGAGAAGCAAGAAGAAAGNTTCTTTGGATCTTTGGGAAAGCTGCTGGCTCAGGCGGG
                      ____________________________________________________________
consensus             TGAAGAGAAGCAAGAAGAAAGCTTCTTTGGATCTTTGGGAAAGCTGCTGGCTCAGGCGGG
 
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rJMSF036D12+          AGAATCCTTCACTACTATCTTGGGAGGCGTATTCCCCGCAATCAAAAGGAAGCATAAGTA
rJMSF036M22+          AGAATCCTTCACTACTATCTTGGGAGGCGTATTCCCCGCAATCAAAAGGAAGCATAAGTA
                      ____________________________________________________________
consensus             AGAATCCTTCACTACTATCTTGGGAGGCGTATTCCCCGCAATCAAAAGGAAGCATAAGTA
 
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rJMSF036D12+          TCAACAGCAACAGACGCAGCAGCAGCAGGACTACTACCAGTTCCAGCAACAGCTGAAGTA
rJMSF036M22+          TCAACAGCAACAGACGCAGCAGCAGCAGGACTACTACCAGTTCCAGCAACAGCTGAAGTA
                      ____________________________________________________________
consensus             TCAACAGCAACAGACGCAGCAGCAGCAGGACTACTACCAGTTCCAGCAACAGCTGAAGTA
 
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rJMSF036D12+          CTCGAATACGTGGCCCGCTCAGGACAGCTATGTAATATCAGAGAAAGACGAACCCCCTTC
rJMSF036M22+          CTCGAATACGTGGCCCGCTCAGGACAGCTATGTAATATCAGAGAAAGACGAACCCCCTTC
                      ____________________________________________________________
consensus             CTCGAATACGTGGCCCGCTCAGGACAGCTATGTAATATCAGAGAAAGACGAACCCCCTTC
 
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rJMSF036D12+          CATTGACATGAGATCCCCGACGCCTCAAAAGACCTATGCATTCATGTCCAAGGATTCTGA
rJMSF036M22+          CATTGACATGAGATCCCCGACGCCTCAAAAGACCTATGCATTCATGTCCAAGGATTCTGA
                      ____________________________________________________________
consensus             CATTGACATGAGATCCCCGACGCCTCAAAAGACCTATGCATTCATGTCCAAGGATTCTGA
 
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rJMSF036D12+          GAAAATGCAAAAGCTCCGACAAAGCCGTGCCTTTTACAGTGAGTGGGGCTCGGACTTCCA
rJMSF036M22+          GAAAATGCAAAAGCTCCGACAAAGCCGTGCCTTTTACAGTGAGTGGGGCTCGGACTTCCA
                      ____________________________________________________________
consensus             GAAAATGCAAAAGCTCCGACAAAGCCGTGCCTTTTACAGTGAGTGGGGCTCGGACTTCCA
 
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rJMSF036D12+          GCAACAACAACAGCAGCAGCAGCAAACTCAGAAGCATCTGAATCACCACCGGTACCATTC
rJMSF036M22+          GCAACAACAACAGCAGCAGCAGCAAACTCAGAAGCATCTGAATCACCACCGGTACCATTC
                      ____________________________________________________________
consensus             GCAACAACAACAGCAGCAGCAGCAAACTCAGAAGCATCTGAATCACCACCGGTACCATTC
 
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rJMSF036D12+          AGCTGCCCCGCAGACTGTTTACGAGCAGAGCCCCGAGAAAACAAACGAGGTTGTGTTCGG
rJMSF036M22+          AGCTGCCCCGCAGACTGTTTACGAGCAGAGCCCCGAGAAAACAAACGAGGTTGTGTTCGG
                      ____________________________________________________________
consensus             AGCTGCCCCGCAGACTGTTTACGAGCAGAGCCCCGAGAAAACAAACGAGGTTGTGTTCGG
 
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rJMSF036D12+          GGCAGTTCAGGAGCAGGAGGGGCAAAATGGCACAATGGTCATAAAGCCTTTGGAACACGC
rJMSF036M22+          GGCAGTTCAGGAGCAGGAGGGGCAAAATGGCACAATGGTCATAAAGCCTTTGGAACACGC
                      ____________________________________________________________
consensus             GGCAGTTCAGGAGCAGGAGGGGCAAAATGGCACAATGGTCATAAAGCCTTTGGAACACGC
 
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rJMSF036D12+          AACGCAGGGTTACAACCATCAAAACCATATTCNTGCTCGGTTCAATCGCCATGGGGTACA
rJMSF036M22+          AACGCAGGGTTACAACCATCAAAACCATATTCNTGCTCGGTTCAA-CGCCATGGGGTACA
                      ____________________________________________________________
consensus             AACGCAGGGTTACAACCATCAAAACCATATTCNTGCTCGGTTCAATCGCCATGGGGTACA
 
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rJMSF036D12+          CTTA-CGGGCAGTAGTCGTCGTATTATAGGTACATAGAAGTTTTGGGCGTNTCAGAAAT 
rJMSF036M22+          CTTANCGGGCAGTAGTCGTCGTATTATAGGTACATAGAAGTTTTGGGTGTNTCAGAAATA
                      ____________________________________________________________
consensus             CTTANCGGGCAGTAGTCGTCGTATTATAGGTACATAGAAGTTTTGGGTGTNTCAGAAATA