clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF035G07 | Sequence | 676 | 000924 (3) | ref|XP_006338664.1| | 7e-119 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor | 771 | 004322 (3) | ref|XP_010554089.1| | 5e-134 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar |
JMSF036L23 | Sequence | 705 | 000924 (3) | ref|XP_006338664.1| | 3e-98 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor | 698 | 004322 (3) | ref|XP_010554089.1| | 8e-119 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar |
JMSF042L05 | Sequence | 706 | 000924 (3) | ref|XP_006338664.1| | 2e-127 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor | 827 | 004322 (3) | ref|XP_010554089.1| | 3e-146 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2-like [Tar |
This contig is upended
. : . : . : . : . : . :
rJMSF042L05+ TGAGCACATACGAGATGAGAAAAGTGAAGGTTCTTCAATCGGTGGTTCCCAT
____________________________________________________________
consensus TGAGCACATACGAGATGAGAAAAGTGAAGGTTCTTCAATCGGTGGTTCCCAT
. : . : . : . : . : . :
rJMSF042L05+ TAAAGATGAAGAGGTTATTCTTGGACAATATGAAGGCTATAGGGATGATCCCACTGTTCC
rJMSF035G07+ TTGGACAATATGAAGGCTATAGGGATGATCCCACTGTTCC
____________________________________________________________
consensus TAAAGATGAAGAGGTTATTCTTGGACAATATGAAGGCTATAGGGATGATCCCACTGTTCC
. : . : . : . : . : . :
rJMSF042L05+ CGACAACTCAAACACTCCAACTTTTGCGACCATGGTTCTGCGCATACACAATGAACGATG
rJMSF035G07+ CGACAACTCAAACACTCCAACTTTTGCGACCATGGTTCTGCGCATACACAATGAACGATG
rJMSF036L23+ CACAATGAACGATG
____________________________________________________________
consensus CGACAACTCAAACACTCCAACTTTTGCGACCATGGTTCTGCGCATACACAATGAACGATG
. : . : . : . : . : . :
rJMSF042L05+ GGAAGGTGTGCCCTTTATACTTAAGGCAGGAAAAGCACTTAGTTCAAGAAAAGCAGAAAT
rJMSF035G07+ GGAAGGTGTGCCCTTTATACTTAAGGCAGGAAAAGCACTTAGTTCAAGAAAAGCAGAAAT
rJMSF036L23+ GGAAGGTGTGCCCTTTATACTTAAGGCAGGAAAAGCACTTAGTTCAAGAAAAGCAGAAAT
____________________________________________________________
consensus GGAAGGTGTGCCCTTTATACTTAAGGCAGGAAAAGCACTTAGTTCAAGAAAAGCAGAAAT
. : . : . : . : . : . :
rJMSF042L05+ TCGGGTCCAATTTAAGGATGTCCCCGGTGATATATTCAAATGTCAAAAGCGTGGGAGGAA
rJMSF035G07+ TCGGGTCCAATTTAAGGATGTCCCCGGTGATATATTCAAATGTCAAAAGCGTGGGAGGAA
rJMSF036L23+ TCGGGTCCAATTTAAGGATGTCCCCGGTGATATATTCAAATGTCAAAAGCGTGGGAGGAA
____________________________________________________________
consensus TCGGGTCCAATTTAAGGATGTCCCCGGTGATATATTCAAATGTCAAAAGCGTGGGAGGAA
. : . : . : . : . : . :
rJMSF042L05+ TGAATTTGTCATACGCCTCCAACCATCAGAAGCGATGTATATGAAACTCATGGTCAAGCA
rJMSF035G07+ TGAATTTGTCATACGCCTCCAACCATCAGAAGCGATGTATATGAAACTCATGGTCAAGCA
rJMSF036L23+ TGAATTTGTCATACGCCTCCAACCATCAGAAGCGATGTATATGAAACTCATGGTCAAGCA
____________________________________________________________
consensus TGAATTTGTCATACGCCTCCAACCATCAGAAGCGATGTATATGAAACTCATGGTCAAGCA
. : . : . : . : . : . :
rJMSF042L05+ ACCTGGGCTAGAAATGTCGACTGCCCAGAGCGAACTAGACTTGTCATATAGGCAACGATA
rJMSF035G07+ ACCTGGGCTAGAAATGTCGACTGCCCAGAGCGAACTAGACTTGTCATATAGGCAACGATA
rJMSF036L23+ ACCTGGGCTAGAAATGTCGACTGCCCAGAGCGAACTAGACTTGTCATATAGGCAACGATA
____________________________________________________________
consensus ACCTGGGCTAGAAATGTCGACTGCCCAGAGCGAACTAGACTTGTCATATAGGCAACGATA
. : . : . : . : . : . :
rJMSF042L05+ TCAAGGGGTTACCATTCCAGAGGCATATGAGCGTCTAATTCTTGACACAATACGAGGGGA
rJMSF035G07+ TCAAGGGGTTACCATTCCAGAGGCATATGAGCGTCTAATTCTTGACACAATACGAGGGGA
rJMSF036L23+ TCAAGGGGTTACCATTCCAGAGGCATATGAGCGTCTAATTCTTGACACAATACGAGGGGA
____________________________________________________________
consensus TCAAGGGGTTACCATTCCAGAGGCATATGAGCGTCTAATTCTTGACACAATACGAGGGGA
. : . : . : . : . : . :
rJMSF042L05+ TCAGCAGCACTTTGTTCGCAGGGATGAGTTGAAGGTGGCTTGGGAAATCTTCACCCCGCT
rJMSF035G07+ TCAGCAGCACTTTGTTCGCAGGGATGAGTTGAAGGTGGCTTGGGAAATCTTCACCCCGCT
rJMSF036L23+ TCAGCAGCACTTTGTTCGCAGGGATGAGTTGAAGGTGGCTTGGGAAATCTTCACCCCGCT
____________________________________________________________
consensus TCAGCAGCACTTTGTTCGCAGGGATGAGTTGAAGGTGGCTTGGGAAATCTTCACCCCGCT
. : . : . : . : . : . :
rJMSF042L05+ CCTGCACAGGATAGACGATGGAGAGTTGAAGCCGATCCCTTACAAGCCAGGCAGCCGAGG
rJMSF035G07+ CCTGCACAGGATAGACGATGGAGAGTTGAAGCCGATCCCTTACAAGCCAGGCAGCCGAGG
rJMSF036L23+ CCTGCACAGGATAGACGATGGAGAGTTGAAGCCGATCCCTTACAAGCCAGGCAGCCGAGG
____________________________________________________________
consensus CCTGCACAGGATAGACGATGGAGAGTTGAAGCCGATCCCTTACAAGCCAGGCAGCCGAGG
. : . : . : . : . : . :
rJMSF042L05+ GCCTGTAGAAGCAGATGAGTTGTTGCGAAAGGCGGGCTATGTTCAGACCCATGGCTACAT
rJMSF035G07+ GCCTGTAGAAGCAGATGAGTTGTTGCGAAAGGCGGGCTATGTTCAGACCCATGGCTACAT
rJMSF036L23+ GCCTGTAGAAGCAGATGAGTTGTTGCGAAAGGCGGGCTATGTTCAGACCCATGGCTACAT
____________________________________________________________
consensus GCCTGTAGAAGCAGATGAGTTGTTGCGAAAGGCGGGCTATGTTCAGACCCATGGCTACAT
. : . : . : . : . : . :
rJMSF042L05+ TTGGATCCCTCCAACCTTATA
rJMSF035G07+ TTGGATCCCTCCAACCTTATA
rJMSF036L23+ TTGGATCCCTCCAACCTTATAGAATTCCAGTTCTAGTATTAATTAAACACAACACACTTT
____________________________________________________________
consensus TTGGATCCCTCCAACCTTATAGAATTCCAGTTCTAGTATTAATTAAACACAACACACTTT
. : . : . : . : . : . :
rJMSF036L23+ ATAATAGTTTCTGCTACAAGCCAACAATCTTCTATATGTAATATGTGGCTGCCTACCCCT
____________________________________________________________
consensus ATAATAGTTTCTGCTACAAGCCAACAATCTTCTATATGTAATATGTGGCTGCCTACCCCT
. : . : . : . : . : . :
rJMSF036L23+ ACCAAGTAAACAGAACAACTCTTTTTGTATCCAATGAGTAATAATAAATAAATAAGCATC
____________________________________________________________
consensus ACCAAGTAAACAGAACAACTCTTTTTGTATCCAATGAGTAATAATAAATAAATAAGCATC