Contig 004321:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036B19Sequence674007978 (2)ref|XP_009767507.1|7e-44PREDICTED: E3 ubiquitin-protein ligase ATL4 [Nicotiana sylvestris]644004321 (2)ref|XP_009603589.1|1e-61PREDICTED: E3 ubiquitin-protein ligase ATL4 [Nicotiana tomentosiformis]
JMSF036I01Sequence673007978 (2)ref|XP_009767507.1|3e-43PREDICTED: E3 ubiquitin-protein ligase ATL4 [Nicotiana sylvestris]531004321 (2)ref|XP_009767507.1|2e-60PREDICTED: E3 ubiquitin-protein ligase ATL4 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036B19+ GTCTCCAACGACCGCGGCCGCGGCGGAGGAAATGCCGATCCTAACA
                      ____________________________________________________________
consensus GTCTCCAACGACCGCGGCCGCGGCGGAGGAAATGCCGATCCTAACA
 
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rJMSF036B19+ GCGGCAGTTTTCGGATTGAGATTGGTAGTGTTAGCCGCCGTCGCGGAGACTCCGGTTCCA
                      ____________________________________________________________
consensus GCGGCAGTTTTCGGATTGAGATTGGTAGTGTTAGCCGCCGTCGCGGAGACTCCGGTTCCA
 
. : . : . : . : . : . :
rJMSF036B19+ TCGTCGGCGACAGTCGGAGGTCTTACTCGGTTGGCTCGTCGTTCGAGTATATCGTAGACG
rJMSF036I01+ ACAGTCGGAGGTCTTACTCGGTTGGCTCGTCGTTCGAGTATATCGTAGACG
                      ____________________________________________________________
consensus TCGTCGGCGACAGTCGGAGGTCTTACTCGGTTGGCTCGTCGTTCGAGTATATCGTAGACG
 
. : . : . : . : . : . :
rJMSF036B19+ ACGGTTACGAGGTGTCTATCGGGTCTATCCATCGCAGAGGCGGCTCGGAATGCACTGACA
rJMSF036I01+ ACGGTTACGAGGTGTCTATCGGGTCTATCCATCGCAGAGGCGGCTCGGAATGCACTGACA
                      ____________________________________________________________
consensus ACGGTTACGAGGTGTCTATCGGGTCTATCCATCGCAGAGGCGGCTCGGAATGCACTGACA
 
. : . : . : . : . : . :
rJMSF036B19+ AGGAATCCATCGGAGCTCCGGTACCAGAGCCTCCGGGGGACAGTTTGGCGCCAGACGTAT
rJMSF036I01+ AGGAATCCATCGGAGCTCCGGTACCAGAGCCTCCGGGGGACAGTTTGGCGCCAGACGTAT
                      ____________________________________________________________
consensus AGGAATCCATCGGAGCTCCGGTACCAGAGCCTCCGGGGGACAGTTTGGCGCCAGACGTAT
 
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rJMSF036B19+ CCGGCGGCGGAAGGAGTTGGCTCCGGGACTACGTCGATCGAATCGCGTCGTTTTCTCTCT
rJMSF036I01+ CCGGCGGCGGAAGGAGTTGGCTCCGGGACTACGTCGATCGAATCGCGTCGTTTTCTCTCT
                      ____________________________________________________________
consensus CCGGCGGCGGAAGGAGTTGGCTCCGGGACTACGTCGATCGAATCGCGTCGTTTTCTCTCT
 
. : . : . : . : . : . :
rJMSF036B19+ CTTCCCGTACGATGTCGTTTCGAGGCTCCGGAAGATTCTTCACAGATAGCGGTCGCCGGA
rJMSF036I01+ CTTCCCGTACGATGTCGTTTCGAGGCTCCGGAAGATTCTTCACAGATAGCGGTCGCCGGA
                      ____________________________________________________________
consensus CTTCCCGTACGATGTCGTTTCGAGGCTCCGGAAGATTCTTCACAGATAGCGGTCGCCGGA
 
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rJMSF036B19+ GCGACACCGTTGTCCCGATAGACGACGATTTGGAATCCGGCCGGATCGGCGAGGAAATCA
rJMSF036I01+ GCGACACCGTTGTCCCGATAGACGACGATTTGGAATCCGGCCGGATCGGCGAGGAAATCA
                      ____________________________________________________________
consensus GCGACACCGTTGTCCCGATAGACGACGATTTGGAATCCGGCCGGATCGGCGAGGAAATCA
 
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rJMSF036B19+ GCGAATTATTTCGGTGGCTTTCAGGGGTATGAGAATGTATATTCAAACTCTTTAGGGGCA
rJMSF036I01+ GCGAATTATTTCGGTGGCTTTCAGGGGTATGAGAATGTATATTCAAACTCTTTAGGGGCA
                      ____________________________________________________________
consensus GCGAATTATTTCGGTGGCTTTCAGGGGTATGAGAATGTATATTCAAACTCTTTAGGGGCA
 
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rJMSF036B19+ AATTAGATATTTCACAGACTCCAAAATTTTTGCTATTTCCTCCCTTGTTCTCCCTCATTT
rJMSF036I01+ AATTAGATATTTCACAGACTCCAAAATTTTTGCTATTTCCTCCCTTGTTCTCCCTCATTT
                      ____________________________________________________________
consensus AATTAGATATTTCACAGACTCCAAAATTTTTGCTATTTCCTCCCTTGTTCTCCCTCATTT
 
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rJMSF036B19+ TGCTATATGCATCCTGCAAATACTGGAGTGTAGATATATGCCGAATTCGTTTATCTTT
rJMSF036I01+ TGCTATATGCATCCTGCAAATACTGGAGTGTAGATATATGCCGAATTCGTTTATCTTTNA
                      ____________________________________________________________
consensus TGCTATATGCATCCTGCAAATACTGGAGTGTAGATATATGCCGAATTCGTTTATCTTTNA