Contig 004319:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035J09Sequence592018976ref|XP_009354845.1|1e-34PREDICTED: interactor of constitutive active ROPs 1-like [Pyrus x bretschneider751004319 (2)ref|XP_009604716.1|3e-40PREDICTED: interactor of constitutive active ROPs 1-like [Nicotiana tomentosifo
JMSF046I22Sequence308024280659004319 (2)ref|XP_009604716.1|5e-29PREDICTED: interactor of constitutive active ROPs 1-like [Nicotiana tomentosifo

Alignment

This contig is upended


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rJMSF046I22+                                                               CCAAGAA
rJMSF035J09+                                       GGAAAAAGAGCTCGTCAACTTTGGCCAAGAA
                      ____________________________________________________________
consensus                                          GGAAAAAGAGCTCGTCAACTTTGGCCAAGAA
 
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rJMSF046I22+          AACGAGAGCCTCAAACAACAACTAAACGAAAAGGCTATCGAGGCATCATCAGCAAAGGCG
rJMSF035J09+          AACGAGAGCCTCAAACAACAACTAAACGAAAAGGCTATCGAGGCATCATCAGCAAAGGCG
                      ____________________________________________________________
consensus             AACGAGAGCCTCAAACAACAACTAAACGAAAAGGCTATCGAGGCATCATCAGCAAAGGCG
 
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rJMSF046I22+          AAGGGAGAAGAGGCAGCTCTCGAGTTGAACCAGGTTAGAGAAGAGCTGGAANCCACTAGA
rJMSF035J09+          AAGGGAGAAGAGGCAGCTCTCGAGTTGAACCAGGTTAGAGAAGAGCTGGAAACCACTAGA
                      ____________________________________________________________
consensus             AAGGGAGAAGAGGCAGCTCTCGAGTTGAACCAGGTTAGAGAAGAGCTGGAAACCACTAGA
 
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rJMSF046I22+          GACAATTTAACCAGGTTCAATGAACAGCTAGAAGCCAGCGAAAAGGCAAAGGAGGCTTTA
rJMSF035J09+          GACAATTTAACCAGGTTCAATGAACAGCTAGAAGCCAGCGAAAAGGCAAAGGAGGCTTTA
                      ____________________________________________________________
consensus             GACAATTTAACCAGGTTCAATGAACAGCTAGAAGCCAGCGAAAAGGCAAAGGAGGCTTTA
 
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rJMSF046I22+          GAAACCGAGATGAAAAAACTGCGCATTCAAACCGAGCAATGGAGGAAAGCAGCAGATGCA
rJMSF035J09+          AAAACCGAGATGAAAAAACTGCGCATTCAAACCGAGCAATGGAGGAAAGCAGCAGATGCA
                      ____________________________________________________________
consensus             GAAACCGAGATGAAAAAACTGCGCATTCAAACCGAGCAATGGAGGAAAGCAGCAGATGCA
 
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rJMSF046I22+          GCAGCTACAGTTCTTTCCGGGGGCATGGAGATGAACGGCAGAAGGATGTCCGAGAGGTGT
rJMSF035J09+          GCAGCTACAGTTCTTTCCGGGGGCATGGAGATGAACGGCAGAAGGATGTCCGAGAGGTGT
                      ____________________________________________________________
consensus             GCAGCTACAGTTCTTTCCGGGGGCATGGAGATGAACGGCAGAAGGATGTCCGAGAGGTGT
 
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rJMSF046I22+          GGATCAATGGAAAAATACAGCAGCAGTGTATTTGAACCAGGAGTCGGGGGATATGGCAGT
rJMSF035J09+          GGATCAATGGAAAAATACAGCAGCAGTGTATTTGAACCAGGAGTCGGGGGATATGGCAGT
                      ____________________________________________________________
consensus             GGATCAATGGAAAAATACAGCAGCAGTGTATTTGAACCAGGAGTCGGGGGATATGGCAGT
 
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rJMSF046I22+          TACATGGGATATCCAGGGTTTCTCGATGACTCTGAGGATGTTTCAGACAGTGGAAAGAAG
rJMSF035J09+          TACATGGGATATCCAGGGTTTCTCGATGACTCTGAGGATGTTTCAGACAGTGGAAAGAAG
                      ____________________________________________________________
consensus             TACATGGGATATCCAGGGTTTCTCGATGACTCTGAGGATGTTTCAGACAGTGGAAAGAAG
 
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rJMSF046I22+          AAAGGTTCTGGCATAAAAATGTTGGGTGATCTCTGGAAAAAGAAGAACCAGAAATGAACC
rJMSF035J09+          AAAGGTTCTGGCATAAAAATGTTGGGTGATCTCTGGAAAAAGAAGAACCAGAAATGAACC
                      ____________________________________________________________
consensus             AAAGGTTCTGGCATAAAAATGTTGGGTGATCTCTGGAAAAAGAAGAACCAGAAATGAACC
 
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rJMSF046I22+          ATTTTTAGCANTAAGGAAGTTGAAGAGAACTAGTTTTTTCTAGTTCTTGTTTTTCTGGCT
rJMSF035J09+          ATTTTTAGCATTAAGGAAGTTGAAGAGAACTAGTTTTTTCTAGTTCTTGTTTTTCTGGCT
                      ____________________________________________________________
consensus             ATTTTTAGCATTAAGGAAGTTGAAGAGAACTAGTTTTTTCTAGTTCTTGTTTTTCTGGCT
 
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rJMSF046I22+          ACGAAAATGGTAGTAACATCATGTGTTTCAATCTCTGGCATCTTGGTTATTTATGGATT 
rJMSF035J09+          ACGAAAATGGTAGTAACATCATGTGTTTCAATCTCTGGCATCTTGGTTATTTATGGATTC
                      ____________________________________________________________
consensus             ACGAAAATGGTAGTAACATCATGTGTTTCAATCTCTGGCATCTTGGTTATTTATGGATTC
 
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rJMSF035J09+          TATGTTTAGGATTTGGGTGTTTTTAGTTAGTTAAGCACGGCATCAATTCGATGTAGCAAC
                      ____________________________________________________________
consensus             TATGTTTAGGATTTGGGTGTTTTTAGTTAGTTAAGCACGGCATCAATTCGATGTAGCAAC
 
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rJMSF035J09+          AACTTGAACTATGAAATTCTTGCCATTTTCAGAACTTGTTGCAGAAATGAGGCTACCCAA
                      ____________________________________________________________
consensus             AACTTGAACTATGAAATTCTTGCCATTTTCAGAACTTGTTGCAGAAATGAGGCTACCCAA