Contig 004317:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS001G02+                             CTGTAGATAGTTTAGATGTCAGAGGTCTCTATATCTATGATG
                      ____________________________________________________________
consensus                               CTGTAGATAGTTTAGATGTCAGAGGTCTCTATATCTATGATG
 
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JMFS001G02+           ATGGATTTCGGTGTGTTATATGGTTTGGTAAAATGCTTTCGACAGATGTCATCAAGAGTT
rJMSF035E04+                                  TTGGTAAAATGCTTTCAACAGATGTCATCAAGAGTT
                      ____________________________________________________________
consensus             ATGGATTTCGGTGTGTTATATGGTTTGGTAAAATGCTTTCGACAGATGTCATCAAGAGTT
 
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JMFS001G02+           TATTGGGTGATGAATTTGCTGCAGACTTCTCAAAGGTTGGCCTGCATGAGCAAGATAATG
JMFS053C08-                                CAGACTTCTCAAAGGTTTGCCTGCATGAGCAAGATAATG
rJMSF035E04+          TATTGGGTGATGAATTTGCTGCAGACTTCTCAAAGGTTTGCCTGCATGAGCAAGATAATG
                      ____________________________________________________________
consensus             TATTGGGTGATGAATTTGCTGCAGACTTCTCAAAGGTTTGCCTGCATGAGCAAGATAATG
 
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JMFS001G02+           AAGTGTCAAGAAAATTGATGGGCTTGCTTAGAAAGTTTAGACAAAGTGACCCATAGTATT
JMFS053C08-           AAGTGTCAAGAAAATTGATGGGCTTGCTTAGAAAGTTTAGACAAAGTGACCCATCGTATT
rJMSF035E04+          AAGTGTCAAGAAAATTGATGGGCTTGCTTAGAAAGTTTAGACAAAGTGACCCATCGTATT
                      ____________________________________________________________
consensus             AAGTGTCAAGAAAATTGATGGGCTTGCTTAGAAAGTTTAGACAAAGTGACCCATCGTATT
 
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JMFS001G02+           ATCAATTATGTCACCTTGTGAGGCAAGGTGAACAGCCGAGAGAAGGATTGTTCCTTGTAA
JMFS053C08-           ATCAATTATGTCACCTTGTGAGGCAAGGTGAACAGCCGAGAGAAGGATTCTTCCTTCTAA
rJMSF035E04+          ATCAATTATGTCACCTTGTGAGGCAAGGTGAACAGCCGAGAGAAGGATTCTTCCTTCTAA
                      ____________________________________________________________
consensus             ATCAATTATGTCACCTTGTGAGGCAAGGTGAACAGCCGAGAGAAGGATTCTTCCTTCTAA
 
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JMFS001G02+           GAAATTTAGTTGAGGACCAGGTTGGTGGTACAAATGGTTATATGGATTGGATTGTGCAAT
JMFS053C08-           GAAATCTAGTTGAGGACCAGGTTGGTGGTACAAATGGTTATATGGATTGGATTGTGCAAT
rJMSF035E04+          GAAATCTAGTTGAGGACCAGGTTGGTGGTACAAATGGTTATATGGATTGGATTGTGCAAT
                      ____________________________________________________________
consensus             GAAATCTAGTTGAGGACCAGGTTGGTGGTACAAATGGTTATATGGATTGGATTGTGCAAT
 
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JMFS001G02+           TACACCGGCAAATCCAGCAAAATGCGTAACAT                            
JMFS053C08-           TACACCGGCAAATCCAGCAAAATGCGTAACATACAGATTACAGATCAATATATAGGCATA
rJMSF035E04+          TACACCGGCAAATCCAGCAAAATGCGTAACATACA-------GATCAATATATAGGCATA
                      ____________________________________________________________
consensus             TACACCGGCAAATCCAGCAAAATGCGTAACATACAGATTACAGATCAATATATAGGCATA
 
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JMFS053C08-           CAAGAGTATTTGGAAGAGACATAATAAATAAAGGAAGCTACTCTTCTCCCCAAGGCTTTA
rJMSF035E04+          CAAGAGTATTTGGAAGAGACATAATAAATAAAGGAAGCTACTCTTCTCCCCAAGGCTTTA
                      ____________________________________________________________
consensus             CAAGAGTATTTGGAAGAGACATAATAAATAAAGGAAGCTACTCTTCTCCCCAAGGCTTTA
 
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JMFS053C08-           ATTACTAGAGTAAACAAAGCTGTAAAGGTGGGCTGCTCAAGACATTTTCTAATATTTCTA
rJMSF035E04+          ATTACTAGAGTAAACAAAGCTGTAAAGGTGGGCTGCTCAAGACATTTTCTAATATTTCTA
                      ____________________________________________________________
consensus             ATTACTAGAGTAAACAAAGCTGTAAAGGTGGGCTGCTCAAGACATTTTCTAATATTTCTA
 
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JMFS053C08-           ACACTCCTCCTCAAGCTGGAGCGTATAAATCAAAAGCTCCTAGAGCTTGCTACAAATGTA
rJMSF035E04+          ACACTCCTCCTCAAGCTGGAGCGTATAAATCAAAAGCTCCTAGAGCTTGCTACAAATGTA
                      ____________________________________________________________
consensus             ACACTCCTCCTCAAGCTGGAGCGTATAAATCAAAAGCTCCTAGAGCTTGCTACAAATGTA
 
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JMFS053C08-           TTCAGTCTTAGGTCCACGAAGAGATTTGGTGAGAACATCAGCAAGTTGATCATTTGACCC
rJMSF035E04+          TTCAGTCTTAGGTCCACGAAGAGATTTGGTGAGAACATCAGCAAGTTGATCATTTGACCC
                      ____________________________________________________________
consensus             TTCAGTCTTAGGTCCACGAAGAGATTTGGTGAGAACATCAGCAAGTTGATCATTTGACCC
 
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JMFS053C08-           AACAAATGTGGTAACGATGTCTCTGGATGTGACCCTCTCTTGTATAAAGTGGCAATCAAC
rJMSF035E04+          AACAAATGTGGTAACGATGTCTCTGGATGTGACCCTCTCTTGTATAAAGTGGCAATCAAC
                      ____________________________________________________________
consensus             AACAAATGTGGTAACGATGTCTCTGGATGTGACCCTCTCTTGTATAAAGTGGCAATCAAC
 
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JMFS053C08-           CTCAATGTGTTTGGTCCATTCATGGTAGACAGGATTGTATGC                  
rJMSF035E04+          CTCAATGTGTTTGGTCCATTCATGGTAGACAGGATTGTATGCAATGTGCAAAGCTGCTTG
                      ____________________________________________________________
consensus             CTCAATGTGTTTGGTCCATTCATGGTAGACAGGATTGTATGCAATGTGCAAAGCTGCTTG
 
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rJMSF035E04+          ATTATCACAATTTAATTTCATAGGACCGGGCTTATAGAAATTGAGTTCTGTAAGAAATGT
                      ____________________________________________________________
consensus             ATTATCACAATTTAATTTCATAGGACCGGGCTTATAGAAATTGAGTTCTGTAAGAAATGT