Contig 004315:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF053I15+                                                                  TAGT
                      ____________________________________________________________
consensus                                                                     TAGT
 
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rJMSF053I15+          GAAAGCTACTTAAAATGGCTAGACATTAGAGAACCCCAAGTCTGTGGGTTTTATGTATCA
                      ____________________________________________________________
consensus             GAAAGCTACTTAAAATGGCTAGACATTAGAGAACCCCAAGTCTGTGGGTTTTATGTATCA
 
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rJMSF053I15+          TTTTGGAAGTTTATGTGGTGATGTCGGAAGAGCAAATGGAGGAAATAGCATGGGGGTTGG
                      ____________________________________________________________
consensus             TTTTGGAAGTTTATGTGGTGATGTCGGAAGAGCAAATGGAGGAAATAGCATGGGGGTTGG
 
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rJMSF053I15+          TTCAATCCAACAAATACTTCATATGGATTGTTAGAGAATCTGAATTAGTTAAACTCCCTA
                      ____________________________________________________________
consensus             TTCAATCCAACAAATACTTCATATGGATTGTTAGAGAATCTGAATTAGTTAAACTCCCTA
 
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rJMSF053I15+          AAGATTTTAAATTTAAAACATTTGAGAAAGGTATAATTGTGAAATGGTGTTCTCAAGTTG
rJMSF035B05+                               TTGAGAAAGGTATAATTGTGAAATGGTGTTCTCAAGTTG
                      ____________________________________________________________
consensus             AAGATTTTAAATTTAAAACATTTGAGAAAGGTATAATTGTGAAATGGTGTTCTCAAGTTG
 
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rJMSF053I15+          ATGTTTTGTTACACAGGGCAGTTGCGTGCTTTATGACTCATTGTGGATGGAATTCCACAC
rJMSF035B05+          ATGTTTTGTTACACAGGGCAGTTGCGTGCTTTATGACTCATTGTGGATGGAATTCCACAC
                      ____________________________________________________________
consensus             ATGTTTTGTTACACAGGGCAGTTGCGTGCTTTATGACTCATTGTGGATGGAATTCCACAC
 
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rJMSF053I15+          TGGAAGCATTGTGTTTGGGTGTGCCAATGGTTGGCATGCCATATCTTGCAGATCAACCAA
rJMSF035B05+          TGGAAGCATTGTGTTTGGGTGTGCCAATGGTTGGCATGCCATATCTTGCAGATCAACCAA
                      ____________________________________________________________
consensus             TGGAAGCATTGTGTTTGGGTGTGCCAATGGTTGGCATGCCATATCTTGCAGATCAACCAA
 
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rJMSF053I15+          CTAATGCCAAACTGATTGAGGATGTTTGGAAGGTAGGTATTCGAGTTAAGGTGAATGAGA
rJMSF035B05+          CTAATGCCAAACTGATTGAGGATGTTTGGAAGGTAGGTATTCGAGTTAAGGTGAATGAGA
                      ____________________________________________________________
consensus             CTAATGCCAAACTGATTGAGGATGTTTGGAAGGTAGGTATTCGAGTTAAGGTGAATGAGA
 
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rJMSF053I15+          AGGGAATCTTTACAAGACAAGAAATTCAAATTTGTATAAAACAAGTGATGGAGGGAGAGA
rJMSF035B05+          AGGGAATCTTTACAAGACAAGAAATTCAAATTTGTATAAAACAAGTGATGGAGGGAGAGA
                      ____________________________________________________________
consensus             AGGGAATCTTTACAAGACAAGAAATTCAAATTTGTATAAAACAAGTGATGGAGGGAGAGA
 
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rJMSF053I15+          AAGCTAATGAGTTTCGAAGGAATGTAGTAAAATGGAAAGGATTAGCAGAAGAAGCAACAA
rJMSF035B05+          AAGCTAATGAGTTTCGAAGGAATGTAGTAAAATGGAAAGGATTAGCAGAAGAAGCAACAA
                      ____________________________________________________________
consensus             AAGCTAATGAGTTTCGAAGGAATGTAGTAAAATGGAAAGGATTAGCAGAAGAAGCAACAA
 
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rJMSF053I15+          GTGAAGGTGGAAGTTCTGATGTGAATATCAAAGATTTCATCTTTCAAATGGCTTATGGCA
rJMSF035B05+          GTGAAGGTGGAAGTTCTGATGTGAATATCAAAGATTTCATCTTTCAAATGGCTTATGGCA
                      ____________________________________________________________
consensus             GTGAAGGTGGAAGTTCTGATGTGAATATCAAAGATTTCATCTTTCAAATGGCTTATGGCA
 
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rJMSF053I15+          AATGAAGGCAAAAGTTGTTGGTTTTAGGGTTTTCAAGCCCAGAGAAGTCCAACCCAACCG
rJMSF035B05+          AATGAAGGCAAAAGTTGTTGGTTTTAGGGTTTTCAAGCCCAGAGAAGTCCAACCCAACCG
                      ____________________________________________________________
consensus             AATGAAGGCAAAAGTTGTTGGTTTTAGGGTTTTCAAGCCCAGAGAAGTCCAACCCAACCG
 
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rJMSF053I15+          TGGTTGGTGAATTCACCTTTTAAATAAGGCTAAGTGATCTACAAAGGGAATGATCGTAAT
rJMSF035B05+          TGGTTGGTGAATTCACCTTTTAAATAAGGCTAAGTGATCTACAAAGGGAATGATCGTAAT
                      ____________________________________________________________
consensus             TGGTTGGTGAATTCACCTTTTAAATAAGGCTAAGTGATCTACAAAGGGAATGATCGTAAT
 
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rJMSF053I15+          CTCTTGTATATTGTAATCTTTTGTATAGCGAAATGTCATTTCCCCTCTTAAAGTAACTAA
rJMSF035B05+          CTCTTGTATATTGTAATCTTTTGTATAGCGAAATGTCATTTCCCCTCTTAAAGTAACTAA
                      ____________________________________________________________
consensus             CTCTTGTATATTGTAATCTTTTGTATAGCGAAATGTCATTTCCCCTCTTAAAGTAACTAA
 
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rJMSF053I15+          ATAAATAGTTATTGCCTTTACCCTCTCCAACTCGCAAATTATTCTTTGGATTCAGGTTCA
rJMSF035B05+          ATAAATAGTTATTGCCTTTACCCTCTCCAACTCGCAAATTATTCTTTGGATTCAGGTTCA
                      ____________________________________________________________
consensus             ATAAATAGTTATTGCCTTTACCCTCTCCAACTCGCAAATTATTCTTTGGATTCAGGTTCA
 
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rJMSF053I15+          AATGTTCACAATT                                               
rJMSF035B05+          AATGTTCACAATTTATTTTTTAAAAATTCACAATTTGTATATTACGAAAACACAATGTAA
                      ____________________________________________________________
consensus             AATGTTCACAATTTATTTTTTAAAAATTCACAATTTGTATATTACGAAAACACAATGTAA