Contig 004312:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002G22Sequence301004312 (4)729004312 (4)ref|XP_009627574.1|125PREDICTED: uncharacterized protein LOC104118097 [Nicotiana tomentosiformis]
JMSF033F07Sequence611004312 (4)ref|XP_009796905.1|100PREDICTED: uncharacterized protein LOC104243422 [Nicotiana sylvestris]751004312 (4)ref|XP_009796905.1|137PREDICTED: uncharacterized protein LOC104243422 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF033F07-                                       ATAGGGGTGGGGATATGATTGGTGAAAAGTT
                      ____________________________________________________________
consensus                                          ATAGGGGTGGGGATATGATTGGTGAAAAGTT
 
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rJMSF002G22-                                                     ATCGAAGCAAACCTTGC
rJMSF033F07-          CAATAAATTATTCATCCATCAATAGACGAAAAGCAGCTCTGAGATCGAAGCAAACCTTGC
                      ____________________________________________________________
consensus             CAATAAATTATTCATCCATCAATAGACGAAAAGCAGCTCTGAGATCGAAGCAAACCTTGC
 
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rJMSF002G22-          TTTTTCACAGGGCTTGATCGAGGGGAATCCAGGCTCCGCAGCAGCAGCTGCTTCACGGCC
rJMSF033F07-          TTTTTCACAGGGCTTGATCGAGGGGAATCCAGGCTCCGCAGCAGCAGCTGCTTCACGGCC
                      ____________________________________________________________
consensus             TTTTTCACAGGGCTTGATCGAGGGGAATCCAGGCTCCGCAGCAGCAGCTGCTTCACGGCC
 
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rJMSF002G22-          AGGATGAGGTCCTCCGTCGGGCTCGGCGGCGGCCTCTGAGCTTTGAACTTTTTGCAGAAC
JMSF033F07+                                                    TTTGAACTTTTTGCAGAAC
rJMSF033F07-          AGGATGAGGTCCTCCGTCGGGCTCGGCGGCGGCCTCTGAGCTTTGAACTTTTTGCAGAAC
                      ____________________________________________________________
consensus             AGGATGAGGTCCTCCGTCGGGCTCGGCGGCGGCCTCTGAGCTTTGAACTTTTTGCAGAAC
 
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rJMSF002G22-          GTCATGTGGCGGTTCAGAGCCTCTTCACTGCCAATACGCCGCTCCGACCTTGCTATCTCG
JMSF033F07+           GTCATGTGGCGGTTCAGAGCCTCTTCACTGCCAATACGCCGCTCCGACCTTGCTATCTCG
rJMSF033F07-          GTCATGTGGCGGTTCAGAGCCTCTTCACTGCCAATACGCCGCTCCGACCTTGCTATCTCG
                      ____________________________________________________________
consensus             GTCATGTGGCGGTTCAGAGCCTCTTCACTGCCAATACGCCGCTCCGACCTTGCTATCTCG
 
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rJMSF002G22-          TCCTTCACCGCCTCTGCGCACAGCCCGCATATCCACCGCCCTTGGTTCCGCTCTCGGACC
JMSF033F07+           TCCTTCACCGCCTCTGCGCACAGCCCGCATATCCACCGCCCTTGGTTCCGCTCTCGGACC
rJMSF033F07-          TCCTTCACCGCCTCTGCGCACAGCCCGCATATCCACCGCCCTTGGTTCCGCTCTCGGACC
                      ____________________________________________________________
consensus             TCCTTCACCGCCTCTGCGCACAGCCCGCATATCCACCGCCCTTGGTTCCGCTCTCGGACC
 
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rJMSF002G22-          TTCGCTACGTACGCCTCCGTGCACTCTTCCGTCAGTCCGCAGCACTCGCATTTCGCAAAC
JMSF033F07+           TTCGCTACGTACGCCTCCGTGCACTCTTCCGTCAGTCCGCAGCACTCGCATTTCGCAAAC
rJMSF033F07-          TTCGCTACGTACGCCTCCGTGCACTCTTCCGTCAGTCCGCAGCACTCGCATTTCGCAAAC
                      ____________________________________________________________
consensus             TTCGCTACGTACGCCTCCGTGCACTCTTCCGTCAGTCCGCAGCACTCGCATTTCGCAAAC
 
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rJMSF002G22-          AACATCACTTCGTTCATCTTTGCCGCTGCCGCCGCCGCTCCGTTTCCCTGCGCTGCCGCC
JMSF033F07+           AACATCACTTCGTTCATCTTTGCCGCTGCCGCCGCCGCTCCGTTTCCCTGCGCTGCCGCC
rJMSF033F07-          AACATCACTTCGTTCATCTTTGCCGCTGCCGCCGCCGCTCCGTTTCCCTGCGCTGCCGCC
                      ____________________________________________________________
consensus             AACATCACTTCGTTCATCTTTGCCGCTGCCGCCGCCGCTCCGTTTCCCTGCGCTGCCGCC
 
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rJMSF002G22-          TCCTTCCTCATCATCATCGTCTTCGCAGCCATTAATCTCGGTGAACTCCAAATCCAAACC
JMSF002G22+                                                              ATCCAAACC
JMSF033F07+           TCCTTCCTCATCATCATCGTCTTCGCAGCCATTAATCTCGGTGAACTCCAAATCCAAACC
rJMSF033F07-          TCCTTCCTCATCATCATCGTCTTCGCAGCCATTAATCTCGGTGAACTCCAAATCCAAACC
                      ____________________________________________________________
consensus             TCCTTCCTCATCATCATCGTCTTCGCAGCCATTAATCTCGGTGAACTCCAAATCCAAACC
 
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rJMSF002G22-          GCTCTTCCGAAATTTACGCAATTTAGCAGACGATCTGGAGAGAATTTTCCAGTAAATCCG
JMSF002G22+           GCTCTTCCGAAATTTACGCAATTTAGCAGACGATCTGGAGAGAATTTTCCAGTAAATCCG
JMSF033F07+           GCTCTTCCGAAATTTACGCAATTTAGCAGACGATCTGGAGAGAATTTTCCAGTAAATCCG
rJMSF033F07-          GCTCTTCCGAAATTTACGCAATTTAGCAGACGATCTGGAGAGAATTTTCCAGTAAATCCG
                      ____________________________________________________________
consensus             GCTCTTCCGAAATTTACGCAATTTAGCAGACGATCTGGAGAGAATTTTCCAGTAAATCCG
 
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rJMSF002G22-          AAAACTTGACAAAAAGATTTGCAGCAACGATCCTCGTTTTCTGTTTGAAAATTATCTTTC
JMSF002G22+           AAAACTTGACAAAAAGATTTGCAGCAACGATCCTCGTTTTCTGTTTGAAAATTATCTTTC
JMSF033F07+           AAAACTTGACAAAAAGATTTGCAGCAACGATCCTCGTTTTCTGTTTGAAAATTATCTTTC
rJMSF033F07-          AAAACTTGACAAAAAGATTTGCAGCAACGATCCTCGTTTTCTGTTTGAAAATTATCTTTC
                      ____________________________________________________________
consensus             AAAACTTGACAAAAAGATTTGCAGCAACGATCCTCGTTTTCTGTTTGAAAATTATCTTTC
 
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rJMSF002G22-          TTTCTCCCACTCGCCTTCTTCTTCAACAATCTCGCCGCCGATGATCAGGAGCTTGAAGAT
JMSF002G22+           TTTCTCCCACTCGCCTTCTTCTTCAACAATCTCGCCGCCGATGATCAGGAGCTTGAAGAT
JMSF033F07+           TTTCTCCCACTCGCCTTCTTCTTCAACAATCTCGCCGCCGATGATCAGGAGCTTGAAGAT
rJMSF033F07-          TTTCTCCCACTCGCCTTCTTCTTCAACAATCTCGCCGCCGATGATCAGGAGCTTGAAGAT
                      ____________________________________________________________
consensus             TTTCTCCCACTCGCCTTCTTCTTCAACAATCTCGCCGCCGATGATCAGGAGCTTGAAGAT
 
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rJMSF002G22-          CATATACATTTCAGAGAGCCCTGTTTGGCTCCT                           
JMSF002G22+           CATATACATTTCAGAGAGCCCTGTTTGGCTCCT                           
JMSF033F07+           CATATACATTTCAGAGAGCCCTGTTTGGCTCCT                           
rJMSF033F07-          CATATACATTTCAGAGAGCCCTGTTTGGCTCCTCGCGATGACTCTATCACCGCCGTCGAG
                      ____________________________________________________________
consensus             CATATACATTTCAGAGAGCCCTGTTTGGCTCCTCGCGATGACTCTATCACCGCCGTCGAG