Contig 004310:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035F14Sequence521004310 (2)ref|XP_006347278.1|2e-54PREDICTED: inositol transporter 1-like [Solanum tuberosum]
JMSF033B24Sequence618017876emb|CDP18528.1|3e-35unnamed protein product [Coffea canephora]759004310 (2)ref|XP_002529745.1|1e-67sugar transporter, putative [Ricinus communis] gb|EEF32611.1| sugar transporter,

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033B24+                               CTATAGTCCAACAATTGTGCAAATGGCTGGGTTCAGCTC
                      ____________________________________________________________
consensus                                  CTATAGTCCAACAATTGTGCAAATGGCTGGGTTCAGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033B24+          AAACCAGTTAGCGTTACTACTCTCTCTTATTGTTGCGCTGATGAATGCCATGGGTACAAT
                      ____________________________________________________________
consensus             AAACCAGTTAGCGTTACTACTCTCTCTTATTGTTGCGCTGATGAATGCCATGGGTACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+                     ACCTCATTGACCATTATGGTCGTAGAAAGTTGGCCCTCACAAGTCTATC
rJMSF033B24+          TCTGGGAATCTACCTCATTGACCATTATGGTCGTAGAAAGTTGGCCCTCACAAGTCTATC
                      ____________________________________________________________
consensus             TCTGGGAATCTACCTCATTGACCATTATGGTCGTAGAAAGTTGGCCCTCACAAGTCTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          TGGCGTGATTGTTTCCCTCGTTGTTCTTGCTGTAGCCTTCATCTTGCAGCCTTCTTCTAG
rJMSF033B24+          TGGCGTGATTGTTTCCCTCGTTGTTCTTGCTGTAGCCTTCATCTTGCAGCCTTCTTCTAG
                      ____________________________________________________________
consensus             TGGCGTGATTGTTTCCCTCGTTGTTCTTGCTGTAGCCTTCATCTTGCAGCCTTCTTCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          CACGGGTACTACTGGGGTCTATGGATGGATTGCAGTTCTAGGTTTGGCTCTTTACATTGC
rJMSF033B24+          CACGGGTACTACTGGGGTCTATGGATGGATTGCAGTTCTAGGTTTGGCTCTTTACATTGC
                      ____________________________________________________________
consensus             CACGGGTACTACTGGGGTCTATGGATGGATTGCAGTTCTAGGTTTGGCTCTTTACATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          CTTCTTTGCACCCGGTATGGGGCCTGTTCCATGGACCGTGAACTCAGAAATATACCCTGA
rJMSF033B24+          CTTCTTTGCACCCGGTATGGGGCCTGTTCCATGGACCGTGAACTCAGAAATATACCCTGA
                      ____________________________________________________________
consensus             CTTCTTTGCACCCGGTATGGGGCCTGTTCCATGGACCGTGAACTCAGAAATATACCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          AGCATACCGGGGAATGTGTGGTGGAATGTCTGCCACCGTTAACTGGATATCCAATCTCAT
rJMSF033B24+          AGCATACCGGGGAATGTGTGGTGGAATGTCTGCCACCGTTAACTGGATATCCAATCTCAT
                      ____________________________________________________________
consensus             AGCATACCGGGGAATGTGTGGTGGAATGTCTGCCACCGTTAACTGGATATCCAATCTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          AGTAGCACAGAGTTTTCTCTCGTTAGCCGAAGCAGTGGGCACCGGTGCAACATTCTTGAT
rJMSF033B24+          AGTAGCACAGAGTTTTCTCTCGTTAGCCGAAGCAGTGGGCACCGGTGCAACATTCTTGAT
                      ____________________________________________________________
consensus             AGTAGCACAGAGTTTTCTCTCGTTAGCCGAAGCAGTGGGCACCGGTGCAACATTCTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          ACTTGCAGTTATAGCCATAGCCGCATTTGGATTTGTGGTGGCTTTTGTACCCGAGACAAA
rJMSF033B24+          ACTTGCAGTTATAGCCATAGCCGCATTTGGATTTGTGGTGGCTTTTGTACCCGAGACAAA
                      ____________________________________________________________
consensus             ACTTGCAGTTATAGCCATAGCCGCATTTGGATTTGTGGTGGCTTTTGTACCCGAGACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          GGGGCTGACGTTTGAGGAAGTCGAGAGGATCTGGAAGGCGAGGGCTCGGGGCAATGGCTC
rJMSF033B24+          GGGGCTGACGTTTGAGGAAGTCGAGAGGATCTGGAAGGCGAGGGCTCGGGGCAATGGCTC
                      ____________________________________________________________
consensus             GGGGCTGACGTTTGAGGAAGTCGAGAGGATCTGGAAGGCGAGGGCTCGGGGCAATGGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035F14+          TGGCTCTGGCAGAGAAGCTCTTCTGGAAGCTGGAAACCAATCTTGAGTCT          
rJMSF033B24+          TGGCTCTGGCAGAGAAGCTCTTCTGGAAGCTGGAAACCAATCTTGAGTCTCTTCTTGATT
                      ____________________________________________________________
consensus             TGGCTCTGGCAGAGAAGCTCTTCTGGAAGCTGGAAACCAATCTTGAGTCTCTTCTTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033B24+          GAAATCAGTTTGTAGATATATAGGATTAAGTGCTCGGTTGAGAGTGCAGTTGTTGCACTG
                      ____________________________________________________________
consensus             GAAATCAGTTTGTAGATATATAGGATTAAGTGCTCGGTTGAGAGTGCAGTTGTTGCACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033B24+          GGGCTTGTATTTGTTGAGCCCTTTCTATTGTATGTGTATTTGCAAAATGATGGATGATCC
                      ____________________________________________________________
consensus             GGGCTTGTATTTGTTGAGCCCTTTCTATTGTATGTGTATTTGCAAAATGATGGATGATCC