Contig 004306:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035K21+                                                 AGGAGCATNGTGGATCATGGG
rJMSF032L16+                                             TTCAAGGAGCATGGTGGATCATGGG
                      ____________________________________________________________
consensus                                                TTCAAGGAGCATGGTGGATCATGGG
 
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rJMSF035K21+          AGACGACTTATGGGGATTTTT--CCTTTCTGGTATTCCAACCAGCTTATTACACACGGAG
rJMSF032L16+          AGACGACTTATGGTGATTTTTTCCTTTCTTGGTATTCCAACCAGCTTATTACACACGGAG
                      ____________________________________________________________
consensus             AGACGACTTATGGTGATTTTTTCCTTTTTTGGTATTCCAACCAGCTTATTACACACGGAG
 
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rJMSF035K21+          ATCAACTTCTTTCGGTTGCTGCCTCCACTTTCAGTGATGTCCCCGAGATTACAGTTTGTG
rJMSF032L16+          ATCAACTTCTTTCGGTTGCTGCCTCCACTTTCAGTGATGTCCCCGAGATTACAGTTTGTG
                      ____________________________________________________________
consensus             ATCAACTTCTTTCGGTTGCTGCCTCCACTTTCAGTGATGTCCCCGAGATTACAGTTTGTG
 
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rJMSF035K21+          GAAAAGTTCCTCTAATCCATTCTTGGTACAAAACTCGTTCCCACCCAGCAGAGCTGGTCG
rJMSF032L16+          GAAAAGTTCCTCTAATCCATTCTTGGTACAAAACTCGTTCCCACCCAGCAGAGCTGGTCG
                      ____________________________________________________________
consensus             GAAAAGTTCCTCTAATCCATTCTTGGTACAAAACTCGTTCCCACCCAGCAGAGCTGGTCG
 
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rJMSF035K21+          CTGGGATCTACAACACGGAGAACAGAGATGGCTACGAAGCTATAGTTGAGATGTTCTCGA
rJMSF032L16+          CTGGGATCTACAACACGGAGAACAGAGATGGCTACGAAGCTATAGTTGAGATGTTCTCGA
                      ____________________________________________________________
consensus             CTGGGATCTACAACACGGAGAACAGAGATGGCTACGAAGCTATAGTTGAGATGTTCTCGA
 
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rJMSF035K21+          AGAACAAGTGCAAAATAATCTTGCCAGGAATGGACCTGTCTGACGAGCAGCAGCCAAAGG
rJMSF032L16+          AGAACAAGTGCAAAATAATCTTGCCAGGAATGGACCTGTCTGACGAGCAGCAGCCAAAGG
                      ____________________________________________________________
consensus             AGAACAAGTGCAAAATAATCTTGCCAGGAATGGACCTGTCTGACGAGCAGCAGCCAAAGG
 
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rJMSF035K21+          AATCCCTCTCGAGTCCAGAATCGTTGCTTGCACAAATTGCATTGTGTTGCAGAAAGCATG
rJMSF032L16+          AATCCCTCTCGAGTCCAGAATCGTTACTTGCACAAATTGCATTGTGTTGCAGAAAGCATG
                      ____________________________________________________________
consensus             AATCCCTCTCGAGTCCAGAATCGTTGCTTGCACAAATTGCATTGTGTTGCAGAAAGCATG
 
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rJMSF035K21+          GAGTTGAAATCCTTGGCCAGAACTCAACGGCTTCCAACGCTGCTGCCAGTGGTTTCGAAC
rJMSF032L16+          GAGTTGAAATCCTTGGCCAGAACTCAACGGCTTCCAACGCTGCTGCCAGTGGTTTCGAAC
                      ____________________________________________________________
consensus             GAGTTGAAATCCTTGGCCAGAACTCAACGGCTTCCAACGCTGCTGCCAGTGGTTTCGAAC
 
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rJMSF035K21+          AGATCAGAAAGTACTTAGCGGGTGAAAGTGCAGCAGCCATCAGCTTGTTCACCTATCAAC
rJMSF032L16+          AGATCAGAAAGTACTTAGCGGGTGAAAGTGCAGCAGCCATCAGCTTGTTCACCTATCAAC
                      ____________________________________________________________
consensus             AGATCAGAAAGTACTTAGCGGGTGAAAGTGCAGCAGCCATCAGCTTGTTCACCTATCAAC
 
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rJMSF035K21+          GGATGGGGGCGTATTTCTTCTCCCCCGACCATTTTCCTTCTTTCACCAAATTCATGC-CA
rJMSF032L16+          GGATGGGGGCGTATTTCTTCTCCCCCGACCATTTTCCTTCTTTCACCAAATTCATGCGCA
                      ____________________________________________________________
consensus             GGATGGGGGCGTATTTCTTCTCCCCCGACCATTTTCCTTCTTTCACCAAATTCATGCGCA
 
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rJMSF035K21+          ACCTCAGGGAACTCGAACTGGAACTCGATTCAGATGATCAGCCTGCTGGATCATCTCTTT
rJMSF032L16+          ACCTCAGGGAACTCGAACTGGAACTCGATTCAGATGATCAGCCTGCTGGATCATCTCTTT
                      ____________________________________________________________
consensus             ACCTCAGGGAACTCGAACTGGAACTCGATTCAGATGATCAGCCTGCTGGATCATCTCTTT
 
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rJMSF035K21+          CTGCCAGGAACCTACAAGAGCAAGCTGCTTAGACATGCCATGCCTAGTATTATAATATAG
rJMSF032L16+          CTGCCAGGAACCTACAAGAGCAAGCTGCTTAGACATGCCATGCCTAGTATTATAATATAG
                      ____________________________________________________________
consensus             CTGCCAGGAACCTACAAGAGCAAGCTGCTTAGACATGCCATGCCTAGTATTATAATATAG
 
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rJMSF035K21+          ATAAGATATTGAATGTGAAATTAGTAAGTGTTAAATATAGAAAAAGAGC           
rJMSF032L16+          ATAAGATATTGAATGTGAAATTAGTAAGTGTTAAATATAGAAAAAGAGCTAAAGCTGTAT
                      ____________________________________________________________
consensus             ATAAGATATTGAATGTGAAATTAGTAAGTGTTAAATATAGAAAAAGAGCTAAAGCTGTAT