Contig 004302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H01Sequence551000834 (3)ref|XP_006361985.1|2e-56PREDICTED: uncharacterized protein LOC102602112 isoform X2 [Solanum tuberosum]643004302 (2)ref|XP_009611870.1|1e-60PREDICTED: protein trichome birefringence-like 12 [Nicotiana tomentosiformis]
JMSF032C09Sequence674000834 (3)ref|XP_006361985.1|1e-80PREDICTED: uncharacterized protein LOC102602112 isoform X2 [Solanum tuberosum]820004302 (2)ref|XP_008813324.1|1e-56PREDICTED: protein trichome birefringence-like 12 isoform X2 [Phoenix dactylife

Alignment

This contig is upended


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rJMSF032C09+                              AAAAGGGATCATATCNGGTCGATGTTGATGTTCCAGCAGA
                      ____________________________________________________________
consensus                                 AAAAGGGATCATATCNGGTCGATGTTGATGTTCCAGCAGA
 
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rJMSF032C09+          TGANTGGGCACACATTGCTGGCTTTTATGATGTGCTAGTTTTAACACTGGTCATTGGTGG
                      ____________________________________________________________
consensus             TGANTGGGCACACATTGCTGGCTTTTATGATGTGCTAGTTTTAACACTGGTCATTGGTGG
 
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rJMSF032C09+          GGCTACGACAAATTTCCAAAAGAGACACCTCTTGTATTTTACAAGGCAGGTCAGCCTATA
                      ____________________________________________________________
consensus             GGCTACGACAAATTTCCAAAAGAGACACCTCTTGTATTTTACAAGGCAGGTCAGCCTATA
 
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rJMSF032C09+          CAACCTCCCTTGGAAATGTTAGATGGGTTTAAGGTTGTCCTAGAGAATATGGTTGCTCAT
                      ____________________________________________________________
consensus             CAACCTCCCTTGGAAATGTTAGATGGGTTTAAGGTTGTCCTAGAGAATATGGTTGCTCAT
 
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rJMSF032C09+          ATAGAAAAACAGTTCCCGAAGACACTTAAGTTCTGGCGTTTGCAATCTCCGAGGCATTTC
                      ____________________________________________________________
consensus             ATAGAAAAACAGTTCCCGAAGACACTTAAGTTCTGGCGTTTGCAATCTCCGAGGCATTTC
 
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rJMSF032C09+          CATGGAGGTGATTGGAACCAAAATGGTAGTTGTGTTTTCAGCGAGCCACTTGATGAATCT
                      ____________________________________________________________
consensus             CATGGAGGTGATTGGAACCAAAATGGTAGTTGTGTTTTCAGCGAGCCACTTGATGAATCT
 
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rJMFF007H01+          CAGAAACAATGGAGTGAACAAGGAAGCAAGAAAGCTTAACGGTGTCATTAAGGAGGCAAT
rJMSF032C09+          CAGAAACAATGGAGTGAACAAGGAAGCAAGAAAGCTTAACGGTGTCATTAAGGAGGCAAT
                      ____________________________________________________________
consensus             CAGAAACAATGGAGTGAACAAGGAAGCAAGAAAGCTTAACGGTGTCATTAAGGAGGCAAT
 
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rJMFF007H01+          AGAAGGCTCGAGTATCAGAATACTTGATCTCACTCACTTGAGTGAGCTCCGGGCAGATGC
rJMSF032C09+          AGAAGGCTCGAGTATCAGAATACTTGATCTCACTCACTTGAGTGAGCTCCGGGCAGATGC
                      ____________________________________________________________
consensus             AGAAGGCTCGAGTATCAGAATACTTGATCTCACTCACTTGAGTGAGCTCCGGGCAGATGC
 
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rJMFF007H01+          CCATCCCGCAATTTGGTTGGGAAAGAAGGATGCAGTCGCCGTTTGGGGCCAGGACTGTAT
rJMSF032C09+          CCATCCCGCAATTTGGTTGGGAAAGAAGGATGCAGTCGCCGTTTGGGGCCAGGACTGTAT
                      ____________________________________________________________
consensus             CCATCCCGCAATTTGGTTGGGAAAGAAGGATGCAGTCGCCGTTTGGGGCCAGGACTGTAT
 
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rJMFF007H01+          GCACTGGTGCCTGCCAGGCGTTCCAGACACTTGGGTCGATATATTGGCACAACAAATTCG
rJMSF032C09+          GCACTGGTGCCTGCCAGGCGTTCCAGACACTTGGGTCGATATATTGGCACAACAAATTCG
                      ____________________________________________________________
consensus             GCACTGGTGCCTGCCAGGCGTTCCAGACACTTGGGTCGATATATTGGCACAACAAATTCG
 
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rJMFF007H01+          TTATAGCGTGGAGACAGGGTGGTAACTGCATAGATCTACAATTTCGAGTTTTTTTTTACG
rJMSF032C09+          TTATAGCGTGGAGACAGGGTGGTAACTGCATAGATCTACAATTTCGAGTTTTTTTTTACG
                      ____________________________________________________________
consensus             TTATAGCGTGGAGACAGGGTGGTAACTGCATAGATCTACAATTTCGAGTTTTTTTTTACG
 
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rJMFF007H01+          AAGACTATACAACTGATCTTTCAGTGAACTCAAACCACATTGCTTCTGCCCACTGCAAAG
rJMSF032C09+          AAGACTATACAGCTGATCTTTCAGTGAACTCAAACCACATTGCTTCTGCCCACTGCAAAG
                      ____________________________________________________________
consensus             AAGACTATACAGCTGATCTTTCAGTGAACTCAAACCACATTGCTTCTGCCCACTGCAAAG
 
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rJMFF007H01+          GTGCTTCAATATTCTCTGGAAGAGCCCTACCATTTCTTATGGTTGAAGAAGCCTGCCGTT
rJMSF032C09+          GTGCTTCAATATTCTCTGGAAGAGCCCTACCATTTCTTATGGTTGAAGAAGCCTGCCGTT
                      ____________________________________________________________
consensus             GTGCTTCAATATTCTCTGGAAGAGCCCTACCATTTCTTATGGTTGAAGAAGCCTGCCGTT
 
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rJMFF007H01+          TCTTACCTTTACTGTTTCAGTGTTTTTGAACATAACCCCCATGATCCCCATCTGTATCA 
rJMSF032C09+          TCTTACCTTTACTGTTTCAGTGTTTTTGAACATAACCCCCATGATCCCCATCTGTATCAT
                      ____________________________________________________________
consensus             TCTTACCTTTACTGTTTCAGTGTTTTTGAACATAACCCCCATGATCCCCATCTGTATCAT