Contig 004300:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031M16Sequence626004300 (2)ref|XP_009775751.1|8e-131PREDICTED: peptide chain release factor 1-like, mitochondrial [Nicotiana sylves709004300 (2)gb|ACU20952.1|9e-55unknown [Glycine max]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031M16- GCTGGAATTTGGGCCGGTGATCTTGTAGGTACGTATGTATCA
                      ____________________________________________________________
consensus GCTGGAATTTGGGCCGGTGATCTTGTAGGTACGTATGTATCA
 
. : . : . : . : . : . :
JMSF031M16- AAAGTATAGTGAACGTAACTCATGGAAGCACAGCCTAGTTTCGTGCTCGGAGGCTGATAT
                      ____________________________________________________________
consensus AAAGTATAGTGAACGTAACTCATGGAAGCACAGCCTAGTTTCGTGCTCGGAGGCTGATAT
 
. : . : . : . : . : . :
JMSF031M16- AGGGGGTTTTAAGACATGCGTCTTGGAGATCAAAGGAAAACGTGTTTATAGCAAATTGAA
                      ____________________________________________________________
consensus AGGGGGTTTTAAGACATGCGTCTTGGAGATCAAAGGAAAACGTGTTTATAGCAAATTGAA
 
. : . : . : . : . : . :
JMSF031M16- GTATGAATCTGGTGTTCATCGAGTTCAACGTTTTCCCCAAACAGAAACTCAAGGCCGTGT
                      ____________________________________________________________
consensus GTATGAATCTGGTGTTCATCGAGTTCAACGTTTTCCCCAAACAGAAACTCAAGGCCGTGT
 
. : . : . : . : . : . :
JMSF031M16- ACACACTTCTACTGCAACAGTTGCTATCATGCCAGAGGCTGATGAAGTTGAGGTGGAAAT
                      ____________________________________________________________
consensus ACACACTTCTACTGCAACAGTTGCTATCATGCCAGAGGCTGATGAAGTTGAGGTGGAAAT
 
. : . : . : . : . : . :
JMSF031M16- TGATCCAAAGGATATTGAGCTTACAACTGCACGCTCTGGTGGCGCTGGAGGGCAGAATGT
                      ____________________________________________________________
consensus TGATCCAAAGGATATTGAGCTTACAACTGCACGCTCTGGTGGCGCTGGAGGGCAGAATGT
 
. : . : . : . : . : . :
JMSF031M16- CAACAAGGTGGAGACAGCTATTGATCTTTTCCACAAACCAACAGGAATCAGAATCTTTTG
                      ____________________________________________________________
consensus CAACAAGGTGGAGACAGCTATTGATCTTTTCCACAAACCAACAGGAATCAGAATCTTTTG
 
. : . : . : . : . : . :
JMSF031M16- TACTGAAGAAAGGACTCAGCTTAAAAATAAGAATCGAGCTTTCCAATTACTCAGAGCAAA
rJMSF031M16+ GGACTCAGCTTAAAAATAAGAATCGAGCTTTCCAATTACTCAGAGCAAA
                      ____________________________________________________________
consensus TACTGAAGAAAGGACTCAGCTTAAAAATAAGAATCGAGCTTTCCAATTACTCAGAGCAAA
 
. : . : . : . : . : . :
JMSF031M16- GCTGTATGAAATTAAAGTGAGGGAGCAGCAAGAGTCGATTAGGAATCAAAGAAAATTGCA
rJMSF031M16+ GCTGTATGAAATTAAAGTGAGGGAGCAGCAAGAGTCGATTAGGAATCAAAGAAAATTGCA
                      ____________________________________________________________
consensus GCTGTATGAAATTAAAGTGAGGGAGCAGCAAGAGTCGATTAGGAATCAAAGAAAATTGCA
 
. : . : . : . : . : . :
JMSF031M16- GGTGGGCACTGGTTCTCGTGCAGAAAAAATTCGGACATACAACTTCAAGGACAACAGGGT
rJMSF031M16+ GGTGGGCACTGGTTCTCGTGCAGAAAAAATTCGGACATACAACTTCAAGGACAACAGGGT
                      ____________________________________________________________
consensus GGTGGGCACTGGTTCTCGTGCAGAAAAAATTCGGACATACAACTTCAAGGACAACAGGGT
 
. : . : . : . : . : . :
JMSF031M16- CACTGATCACCGTTTAAAAATGAATTTTGAACTTACCTCCTTCC
rJMSF031M16+ CACTGATCACCGTTTAAAAATGAATTTTGAACTTACCTCCTTCCTTGAAGGCGACATCGA
                      ____________________________________________________________
consensus CACTGATCACCGTTTAAAAATGAATTTTGAACTTACCTCCTTCCTTGAAGGCGACATCGA
 
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rJMSF031M16+ TGCAGCTATTCAGTCTTGCACTACTATGGAGCAGAAGGAATTACTGCAGGAACTTGCAGA
                      ____________________________________________________________
consensus TGCAGCTATTCAGTCTTGCACTACTATGGAGCAGAAGGAATTACTGCAGGAACTTGCAGA
 
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rJMSF031M16+ GTCTGTTGGAGCAATGGCTTGATTTCAGTCATCCCGATTTCTTACTAAAATCGGGATTTT
                      ____________________________________________________________
consensus GTCTGTTGGAGCAATGGCTTGATTTCAGTCATCCCGATTTCTTACTAAAATCGGGATTTT
 
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rJMSF031M16+ TAAACTCCTCTCTTCTGTGCCGTCTTCATGTGTTTGTAACACAGCAAGGATTTGGGTGTA
                      ____________________________________________________________
consensus TAAACTCCTCTCTTCTGTGCCGTCTTCATGTGTTTGTAACACAGCAAGGATTTGGGTGTA
 
. : . : . : . : . : . :
rJMSF031M16+ TAGTGGGCAACTTGTTTACTGGGAGATTGGTATAGACAAGTCAAAGATGCCAACTTATAA
                      ____________________________________________________________
consensus TAGTGGGCAACTTGTTTACTGGGAGATTGGTATAGACAAGTCAAAGATGCCAACTTATAA
 
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rJMSF031M16+ TTGGTATAATTCTCGGAATCCATTTGAAGATTTGCTCAAGTCAATACTTATCATACGACT
                      ____________________________________________________________
consensus TTGGTATAATTCTCGGAATCCATTTGAAGATTTGCTCAAGTCAATACTTATCATACGACT
 
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rJMSF031M16+ GGCATTTGATCACAACGGGTTGACTCGTGCCGTTCAAATGGATCTGTTCCTTCAGTTATT
                      ____________________________________________________________
consensus GGCATTTGATCACAACGGGTTGACTCGTGCCGTTCAAATGGATCTGTTCCTTCAGTTATT
 
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rJMSF031M16+ TTTGTTTGTTTTCCATACTTAGACTCAAGACTTGTCAAATACGGAGTCACATGAATCCTG
                      ____________________________________________________________
consensus TTTGTTTGTTTTCCATACTTAGACTCAAGACTTGTCAAATACGGAGTCACATGAATCCTG
 
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rJMSF031M16+ GCTTACTTTTAACCATGCCGGTTATTTATAGTTATTATTAAGGGTAACCCACATTCCGAC
                      ____________________________________________________________
consensus GCTTACTTTTAACCATGCCGGTTATTTATAGTTATTATTAAGGGTAACCCACATTCCGAC