Contig 004298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031C04Sequence679004298 (2)emb|CAB88214.1|4e-84putative tropinone reductase [Solanum tuberosum]715004298 (2)ref|XP_006493568.1|6e-81PREDICTED: tropinone reductase homolog isoform X1 [Citrus sinensis]

Alignment

This contig is upended


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JMSF031C04-                                                     GGTTATAGTACCACTAAT
                      ____________________________________________________________
consensus                                                       GGTTATAGTACCACTAAT
 
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JMSF031C04-           TCCTTTATTAGTTTAGACAATTTTATACTTTAGCTTCAACTATGGTATCTTGGTGTTTTA
                      ____________________________________________________________
consensus             TCCTTTATTAGTTTAGACAATTTTATACTTTAGCTTCAACTATGGTATCTTGGTGTTTTA
 
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JMSF031C04-           ATGGCATGACTGCCCTTGTTACTGGTGGTGCTCGAGGTATAGGACTTGCCATAGTCGAAG
                      ____________________________________________________________
consensus             ATGGCATGACTGCCCTTGTTACTGGTGGTGCTCGAGGTATAGGACTTGCCATAGTCGAAG
 
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JMSF031C04-           AACTTGCAAGTTCTGGAGCATATGTTTATACATGTGCACTAGAACCAGAAGAGTTGGACG
                      ____________________________________________________________
consensus             AACTTGCAAGTTCTGGAGCATATGTTTATACATGTGCACTAGAACCAGAAGAGTTGGACG
 
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JMSF031C04-           GGTGTTTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
rJMSF031C04+               TTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
                      ____________________________________________________________
consensus             GGTGTTTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
 
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JMSF031C04-           CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
rJMSF031C04+          CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
                      ____________________________________________________________
consensus             CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
 
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JMSF031C04-           TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
rJMSF031C04+          TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
                      ____________________________________________________________
consensus             TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
 
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JMSF031C04-           AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
rJMSF031C04+          AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
                      ____________________________________________________________
consensus             AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
 
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JMSF031C04-           TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
rJMSF031C04+          TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
                      ____________________________________________________________
consensus             TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
 
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JMSF031C04-           CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
rJMSF031C04+          CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
                      ____________________________________________________________
consensus             CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
 
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JMSF031C04-           AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
rJMSF031C04+          AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
                      ____________________________________________________________
consensus             AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
 
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JMSF031C04-           CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCANTAACGTTGA
rJMSF031C04+          CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCAATAACGTTGA
                      ____________________________________________________________
consensus             CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCAATAACGTTGA
 
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JMSF031C04-           A                                                           
rJMSF031C04+          AAGAAGGAGTTAATGGTCTAATCAATCGTTCAGCATTACGTCGTCCTGGTGAGCCTACTG
                      ____________________________________________________________
consensus             AAGAAGGAGTTAATGGTCTAATCAATCGTTCAGCATTACGTCGTCCTGGTGAGCCTACTG
 
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rJMSF031C04+          AAGTTTCTGGGCCAGTGGCATTTCTTTGCTCTTCAGCAGCTTCATTTATTACCGGTCACA
                      ____________________________________________________________
consensus             AAGTTTCTGGGCCAGTGGCATTTCTTTGCTCTTCAGCAGCTTCATTTATTACCGGTCACA
 
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rJMSF031C04+          TACTAATGGTAGATGGCGGTGCTACCATTAATGGTTATCCTTAATTAATTGGCAAGGCTC
                      ____________________________________________________________
consensus             TACTAATGGTAGATGGCGGTGCTACCATTAATGGTTATCCTTAATTAATTGGCAAGGCTC
 
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rJMSF031C04+          TATTAAGTATTATAAAGTTGATACTCAGTGTTTTTTATTTTAAAAATTCAAGTGCGTGGA
                      ____________________________________________________________
consensus             TATTAAGTATTATAAAGTTGATACTCAGTGTTTTTTATTTTAAAAATTCAAGTGCGTGGA