Contig 004297:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018G22Sequence568004297 (10)emb|CBI29610.3|1e-68unnamed protein product [Vitis vinifera]753004297 (10)ref|XP_002519388.1|4e-85glutathione-s-transferase theta, gst, putative [Ricinus communis] gb|EEF43005.1|
JMSF002H15Sequence377004297 (10)ref|XP_006385118.1|2e-26Glutathione S-transferase zeta class family protein [Populus trichocarpa] gb|AD554017051ref|XP_004230389.1|2e-15PREDICTED: glutathione S-transferase zeta class-like isoform X2 [Solanum lycope
JMSF012B23Sequence239004297 (10)ref|XP_009612147.1|3e-36PREDICTED: glutathione S-transferase zeta class-like [Nicotiana tomentosiformis
JMSF031B05Sequence662024207ref|XP_009783128.1|4e-103PREDICTED: glutathione S-transferase zeta class-like [Nicotiana sylvestris]681004297 (10)ref|XP_009612147.1|1e-87PREDICTED: glutathione S-transferase zeta class-like [Nicotiana tomentosiformis
JMSF038I17Sequence633004297 (10)ref|XP_009783128.1|8e-111PREDICTED: glutathione S-transferase zeta class-like [Nicotiana sylvestris]809004297 (10)ref|XP_009783128.1|3e-123PREDICTED: glutathione S-transferase zeta class-like [Nicotiana sylvestris]
JMSF039F05Sequence296009970 (3)171004297 (10)ref|XP_004230389.1|4e-05PREDICTED: glutathione S-transferase zeta class-like isoform X2 [Solanum lycope
JMSF046C08Sequence783004297 (10)ref|XP_009783128.1|2e-123PREDICTED: glutathione S-transferase zeta class-like [Nicotiana sylvestris]667004297 (10)ref|XP_002519388.1|2e-92glutathione-s-transferase theta, gst, putative [Ricinus communis] gb|EEF43005.1|

Alignment

This contig is upended


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JMFF018G22-                              TCAGCTTCACATTTCGTTGATCACTTGATCATGGCGGGGAC
JMSF046C08-                     GGAACACTATCAGCTTCACATTTCGTTGATCACTTGATCATGGCGGAGAC
JMSF038I17-                              TCAGCTTCACATTTCGTTGATCACTTGATCATGGCGGAGAC
rJMSF039F05+                             TCAGCTTCACATTTCGNNGATCACNTGATCANGGCGGAGAC
rJMSF038I17+                             TCAGCTTCACATTTCGTTGATCACTTGATCATGGCGGAGAC
                      ____________________________________________________________
consensus                       GGAACACTATCAGCTTCACATTTCGTTGATCACTTGATCATGGCGGAGAC
 
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JMFF018G22-           AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTCTACTCCTACTGGCGGAGCTCTTG
JMSF046C08-           AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTCTACTCCTACTGGCGGAGCTCTTG
JMSF038I17-           AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTCTACTCCTACTGGCGGAGCTCTTG
rJMSF039F05+          AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTNTACTCCTACNGGCGGAGCTCTTG
rJMSF038I17+          AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTCTACTCCTACTGGCGGAGCTCTTG
rJMFF018G22+                                                  TCCTACTGGCGGAGCTCTTG
                      ____________________________________________________________
consensus             AGGCGGCGGAGGAGGAGAGTCAACCAAACTTCAACTCTACTCCTACTGGCGGAGCTCTTG
 
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JMFF018G22-           CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
JMSF046C08-           CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
JMSF038I17-           CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
rJMSF039F05+          CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
rJMSF038I17+          CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
rJMFF018G22+          CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
                      ____________________________________________________________
consensus             CTCTTGCCGCGTTAGGATTGCTCTCAATCTCAAAGGACTGGATTACGAGTACAAAGCGGT
 
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JMFF018G22-           TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
JMSF046C08-           TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
JMSF038I17-           TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
rJMSF039F05+          TAACCTGGTC                                                  
JMSF002H15-                                     GCCCTGAATATTTGAAGATTAATCCGATGGGGTT
rJMSF038I17+          TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
rJMFF018G22+          TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
rJMSF046C08+                       GGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
rJMSF031B05+                                                 GAAGCTCAATCCGATGGGGTT
                      ____________________________________________________________
consensus             TAACCTGGTCAAAGGCGAACAATTCAGCCCTGAATTTTTGAAGCTCAATCCGATGGGGTT
 
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JMFF018G22-           TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
JMSF046C08-           TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
JMSF038I17-           TGTGCCGGCGTTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
JMSF002H15-           AGTGCCGGCGTTGGTGGATGGGGACTTTGTTGTTTCTGATTCCTTTGCAATTTTGATGTA
rJMSF038I17+          TGTGCCGGCGTTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
rJMFF018G22+          TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
rJMSF046C08+          TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
rJMSF031B05+          TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
                      ____________________________________________________________
consensus             TGTGCCGGCATTGGTTGATGGAGACATTGTTATTTCAGACTCTTTTGCTATTTTGATGTA
 
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JMFF018G22-           TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
JMSF046C08-           TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
JMSF038I17-           TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
JMSF002H15-           TCTTGAAGACAAGTATCCCCAGCATCCCTTGTTGCC                        
rJMSF038I17+          TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
rJMFF018G22+          TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
rJMSF046C08+          TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
rJMSF031B05+          TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
                      ____________________________________________________________
consensus             TTTGGAAGAAAAGTATCCACAGAATCCCTTGTTGCCGAAGGATCCTAAGTTAAAGGCTAT
 
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JMFF018G22-           AAATTTTCAGGC-CCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
JMSF046C08-           AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
JMSF038I17-           AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
JMSF012B23+                                                            AATCTAGCTAT
rJMSF038I17+          AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
rJMFF018G22+          AAATTTTCAGGC-CCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
rJMSF046C08+          AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
rJMSF031B05+          AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
                      ____________________________________________________________
consensus             AAATTTTCAGGCTGCGAATATTGTTTCTGCAAACATACAGCCTCTACAAAATCTAGCTAT
 
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JMFF018G22-           TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
JMSF046C08-           TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
JMSF038I17-           TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
JMSF012B23+           TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
rJMSF038I17+          TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
rJMFF018G22+          TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
rJMSF046C08+          TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
rJMSF031B05+          TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
                      ____________________________________________________________
consensus             TCTTAAATATATTGAAGACAAAGTTGGTCCTAATGAGAAAGTTCCATGGTGCCAGACTCA
 
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JMFF018G22-           TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
JMSF046C08-           TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
JMSF038I17-           TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
JMSF012B23+           TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
rJMSF038I17+          TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
rJMFF018G22+          TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
rJMSF046C08+          TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
rJMSF031B05+          TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
                      ____________________________________________________________
consensus             TATAAAAAAAGGCTTTGCTGCATTGGAGAAGCTACTGAAAAGTTATGCTGGAAAGTATGC
 
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JMFF018G22-           CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCC                  
JMSF046C08-           CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
JMSF038I17-           CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
JMSF012B23+           CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
rJMSF038I17+          CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
rJMFF018G22+          CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
rJMSF046C08+          CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
rJMSF031B05+          CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
                      ____________________________________________________________
consensus             CACTGGTGATGAAATTTATCTGGCTGATCTATTTCTAGTGCCCCAAATCCATGGAGCAAT
 
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JMSF046C08-           CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
JMSF038I17-           CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATAT          
JMSF012B23+           CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTC                
rJMSF038I17+          CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
rJMFF018G22+          CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
rJMSF046C08+          CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
rJMSF031B05+          CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
                      ____________________________________________________________
consensus             CAACAGATTCAATGTGGATATGAATGAATATCCCCTTCTATCTCGTATATACGAGGCGTA
 
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JMSF046C08-           CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
rJMSF038I17+          CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
rJMFF018G22+          CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
rJMSF046C08+          CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
rJMSF031B05+          CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
                      ____________________________________________________________
consensus             CAAAGAGGTACCTGCTATTCAAAATGCTATGCCGGAGAAACAGCCTGATGCACCAGCTGA
 
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JMSF046C08-           GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
rJMSF038I17+          GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
rJMFF018G22+          GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
rJMSF046C08+          GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
rJMSF031B05+          GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
                      ____________________________________________________________
consensus             GGCAAGAGCTTGAGGTGATTTATCAATGTAAACGAAACTTGTGTTTAATGTTGTAATGGT
 
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JMSF046C08-           TTATGATTCTGAT                                               
rJMSF038I17+          TTATGATTCTGATGGAAAGTGGTATCC                                 
rJMFF018G22+          TTATGATTCTGATGGAAAGTGGTATCCTGGATTCCTGGATTATCTCGAATTGATACTAAA
rJMSF046C08+          TTATGATTCTGATGGAAAGTGGTATCCTGGATTCCTGGATTATCTCGAATTGATACTAAA
rJMSF031B05+          TTATGATTCTGATGGAAAGTGGTATCCTGGATTCCTGGATTATCTCGAATTGATACTAAA
                      ____________________________________________________________
consensus             TTATGATTCTGATGGAAAGTGGTATCCTGGATTCCTGGATTATCTCGAATTGATACTAAA
 
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rJMFF018G22+          TAATCCTCAATAAT                                              
rJMSF046C08+          TAATCCTCAATAAT                                              
rJMSF031B05+          TAATCCTCAATAATGATGCATTTCTCTTCTTTTTGAATTTTATTTAGGGTGTGTTTGGTT
                      ____________________________________________________________
consensus             TAATCCTCAATAATGATGCATTTCTCTTCTTTTTGAATTTTATTTAGGGTGTGTTTGGTT