Contig 004291:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008H03+                       TGAGGGCTTGAATTCACTTGGTGATGTTGGTGGTGNCACTGGAACTG
                      ____________________________________________________________
consensus                          TGAGGGCTTGAATTCACTTGGTGATGTTGGTGGTGNCACTGGAACTG
 
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rJMSF008H03+          TGGCCACAACCATCGCTCACGCTTTCCCTCATCTTAAGTGCACTGTGTTTGATCTTCCGC
                      ____________________________________________________________
consensus             TGGCCACAACCATCGCTCACGCTTTCCCTCATCTTAAGTGCACTGTGTTTGATCTTCCGC
 
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rJMSF008H03+          ATGTTGTCCAAGGCTTGGAAGGTACTAAGAACTTAGACTATGTTGGAGGTGACATGTTCG
                      ____________________________________________________________
consensus             ATGTTGTCCAAGGCTTGGAAGGTACTAAGAACTTAGACTATGTTGGAGGTGACATGTTCG
 
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rJMSF008H03+          CGTCCATTCCTCCTGCAGATGCTCTTTTACTCAAGTGGATATTGCATGATTGGAGCGACG
rJMSF030F15+                                           AGTGGATATTGCATGATTGGAGCGACG
                      ____________________________________________________________
consensus             CGTCCATTCCTCCTGCAGATGCTCTTTTACTCAAGTGGATATTGCATGATTGGAGCGACG
 
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rJMSF008H03+          AAGAAAGCATGAAAATATTGAAGAAATGTAAGGAATCAATTCCCAGTAAAGAAAATGGAG
rJMSF030F15+          AAGAAAGCATGAAAATATTGAAGAAATGTAAGGAATCAATTCCCNGTAAAGAAAATGGAG
                      ____________________________________________________________
consensus             AAGAAAGCATGAAAATATTGAAGAAATGTAAGGAATCAATTCCCAGTAAAGAAAATGGAG
 
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rJMSF008H03+          GGAAGGTTATTATAATAGACATGGTGGTAGATGATAAGATAAAAGATGATAAGTCTATTG
rJMSF030F15+          GGAAGGTTATTATAATAGACATGGTGGTAGATGATAAGATAAAAGATGATAAGTCTATTG
                      ____________________________________________________________
consensus             GGAAGGTTATTATAATAGACATGGTGGTAGATGATAAGATAAAAGATGATAAGTCTATTG
 
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rJMSF008H03+          AAACTCAGATTTTCTTTGATATGTTGATGATGATTCTACAGACAGGAAGAGAGAGAGCAG
rJMSF030F15+          AAACTCAGATTTTCTTTGATATGTTGATGATGATTCTACCGACNGGAAGAGAGAGAGCAG
                      ____________________________________________________________
consensus             AAACTCAGATTTTCTTTGATATGTTGATGATGATTCTACCGACAGGAAGAGAGAGAGCAG
 
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rJMSF008H03+          AGAAAGATTGGTCAAAACTCTTCTTTAAAGCTGGGTTCAATGATTACAAAATAATTCCAA
rJMSF030F15+          AGAAAGATTGGTCAAAACTCTTCTTTAAAGCTGGGTTCAATGATTACAAAATAATTCCNA
                      ____________________________________________________________
consensus             AGAAAGATTGGTCAAAACTCTTCTTTAAAGCTGGGTTCAATGATTACAAAATAATTCCAA
 
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rJMSF008H03+          TCTTGGGATTAAGGTCCTTAATTGAAGTTTATCCTTGACAGATTATTGATCTTGTTATAT
rJMSF030F15+          TCTTGGGATTAAGGTCCTTAATTGAAGTTTATCCNTGACAGATTATTGATCTTGTTATAT
                      ____________________________________________________________
consensus             TCTTGGGATTAAGGTCCTTAATTGAAGTTTATCCTTGACAGATTATTGATCTTGTTATAT
 
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rJMSF008H03+          GTGATTAGATAATAAATATGTGATAAATAATACTGGTATGATTCCTGGGAATCGATCGCC
rJMSF030F15+          GNGATTAGATAATAAATATGTGATAAATAATACTGGTATGATTCCTGGGAATCGATCGCC
                      ____________________________________________________________
consensus             GTGATTAGATAATAAATATGTGATAAATAATACTGGTATGATTCCTGGGAATCGATCGCC
 
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rJMSF008H03+          TATTGACCTGATCTTAGATGATATTATTTCTCTACTTTATTACTTTTCTAATGTTCGTCT
rJMSF030F15+          TATTGACCTGATCTTAGATGATATTATTTCTCTACTTTATTACTTTTCTAATGTTCGTCT
                      ____________________________________________________________
consensus             TATTGACCTGATCTTAGATGATATTATTTCTCTACTTTATTACTTTTCTAATGTTCGTCT
 
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rJMSF008H03+          TTGTTTTGTGAAGCCCTTTGCTAATGGTGTGGCTCATATCTTAGCTAAGGATGCTAGTTT
rJMSF030F15+          TTGTTTTGNGAAGCCCTTTGCTAATGGTGTGGCTCATATCTTAGCTAAGGATGCTAGTTT
                      ____________________________________________________________
consensus             TTGTTTTGTGAAGCCCTTTGCTAATGGTGTGGCTCATATCTTAGCTAAGGATGCTAGTTT
 
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rJMSF008H03+          GCATTTAAGTAGTAGGTNTGGATAGACTCCAGCCCCTCCTTTATCTATACTGCTTTAT  
rJMSF030F15+          GCNTTTAAGTAGTAGGTTTGGATAGACTCCAGCCCCTCCTTTATCTATACTGCTTTATGT
                      ____________________________________________________________
consensus             GCATTTAAGTAGTAGGTTTGGATAGACTCCAGCCCCTCCTTTATCTATACTGCTTTATGT
 
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rJMSF030F15+          AATGACGTGATGAATTATAGAAGTTTCATTTGNGGTTGTTTTCAAAAAATAGCTAGTGTG
                      ____________________________________________________________
consensus             AATGACGTGATGAATTATAGAAGTTTCATTTGNGGTTGTTTTCAAAAAATAGCTAGTGTG
 
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rJMSF030F15+          ATGATTCCTACAAATGTANCGGTTGAATTGTAGATTAGAAATTCNCAACTGCTAAGTTAT
                      ____________________________________________________________
consensus             ATGATTCCTACAAATGTANCGGTTGAATTGTAGATTAGAAATTCNCAACTGCTAAGTTAT