Contig 004290:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030B14+           CTGTCAATGAGCAAGTGCAGGCTGAGGATGCTGAAGTACAGTACCAGCAGAAGGAAGAA
                      ____________________________________________________________
consensus              CTGTCAATGAGCAAGTGCAGGCTGAGGATGCTGAAGTACAGTACCAGCAGAAGGAAGAA
 
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rJMSF030B14+          TCAATAAGTTCTCATGAAAATGAAGCTAATGATAGTAATCCCGTGGAAGAATTTCATCAG
                      ____________________________________________________________
consensus             TCAATAAGTTCTCATGAAAATGAAGCTAATGATAGTAATCCCGTGGAAGAATTTCATCAG
 
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rJMSF030B14+          GAGGAGGAAGATATATCTGGATTGATTGCTGAAGCTGAAGCAGTTCACCCCGAGGAAGGA
                      ____________________________________________________________
consensus             GAGGAGGAAGATATATCTGGATTGATTGCTGAAGCTGAAGCAGTTCACCCCGAGGAAGGA
 
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rJMSF018L22+                                                      ATCCTATCACAATTAC
JMSF018L22-                                                       ATCCTATCACAATTAC
rJMSF030B14+          GTGGAGGATCCTAAGGACATGCAAGAGCAACATGTTTCTCGAGGATCCTATCACAATTAC
                      ____________________________________________________________
consensus             GTGGAGGATCCTAAGGACATGCAAGAGCAACATGTTTCTCGAGGATCCTATCACAATTAC
 
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rJMSF018L22+          AGGGGTAGCCGTGGTGGTGGTGGGCGCAGGGGAAATTTCAACGGCCGCGGTGGGCGTGGC
JMSF018L22-           AGGGGTAGCCGTGGTGGTGGTGGGCGCAGGGGAAATTTCAACGGCCGCGGTGGGCGTGGC
rJMSF030B14+          AGGGGTAGCCGTGGTGGTGGTGGGCGCAGGGGAAATTTCAACGGCCGCGGTGGGCGTGGC
                      ____________________________________________________________
consensus             AGGGGTAGCCGTGGTGGTGGTGGGCGCAGGGGAAATTTCAACGGCCGCGGTGGGCGTGGC
 
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rJMSF018L22+          AGGGGTGGGACTTACCAGAATGGTCACAACCAATATAATGACCACCCGGGTAACTACCGA
JMSF018L22-           AGGGGTGGGACTTACCAGAATGGTCACAACCAATATAATGACCACCCGGGTAACTACCGA
rJMSF030B14+          AGGGGTGGGACTTACCAGAATGGTCACAACCAATATAATGACCACCCGGGTAACTACCGA
                      ____________________________________________________________
consensus             AGGGGTGGGACTTACCAGAATGGTCACAACCAATATAATGACCACCCGGGTAACTACCGA
 
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rJMSF018L22+          TCGAGGAATTCTAACTACAGGGGAAGGGGTGGAAGAGGTGGAAGGGGGGGTGGTGGTGGT
JMSF018L22-           TCGAGGAATTCTAACTACAGGGGAAGGGGTGGAAGAGGTGGAAGGGGGGGTGGTG     
rJMSF030B14+          TCGAGGAATTCTAACTACAGGGGAAGGGGTGGAAGAGGTGGAAGGGGGGGTGGTGGTGGT
                      ____________________________________________________________
consensus             TCGAGGAATTCTAACTACAGGGGAAGGGGTGGAAGAGGTGGAAGGGGGGGTGGTGGTGGT
 
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rJMSF018L22+          GGTTATTACAATAACCAGGGTTATGGAGGCCAAGCTGGAAACTATAATGCAGATTCTTAA
rJMSF030B14+          GGTTATTACAATAACCAGGGTTATGGAGGCCAAGCTGGAAACTATAATGCAGATTCTTAA
                      ____________________________________________________________
consensus             GGTTATTACAATAACCAGGGTTATGGAGGCCAAGCTGGAAACTATAATGCAGATTCTTAA
 
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rJMSF018L22+          GGTATGGTGCTTTACTGTTTATAAACATATTTGGAAGTAGTCTTCTTTTTGGAGGTGGTG
rJMSF030B14+          GGTATGGTGCTTTACTGTTTATAAACATATTTGGAAGTAGTCTTCTTTTTGGAGGTGGTG
                      ____________________________________________________________
consensus             GGTATGGTGCTTTACTGTTTATAAACATATTTGGAAGTAGTCTTCTTTTTGGAGGTGGTG
 
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rJMSF018L22+          AAAGTTTTCTTTGTTGCATGGGACACATGAATGTGGGTTCCTGTTCACATTTCTACCACC
rJMSF030B14+          AAAGTTTTCTTTGTTGCATGGGACACATGAATGTGGGTTCCTGTTCACATTTCTACCACC
                      ____________________________________________________________
consensus             AAAGTTTTCTTTGTTGCATGGGACACATGAATGTGGGTTCCTGTTCACATTTCTACCACC
 
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rJMSF018L22+          CAGGATGTTCTTATTTTTTGTTGCATTAGTCGAAGTGTCTTATTCAGAAAACATTGGGCG
rJMSF030B14+          CAGGATGTTCTTATTTTTTGTTGCATTAGTCGAAGTGTCTTATTCAGAAAACATTGGGCG
                      ____________________________________________________________
consensus             CAGGATGTTCTTATTTTTTGTTGCATTAGTCGAAGTGTCTTATTCAGAAAACATTGGGCG
 
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rJMSF018L22+          GAAAAATAGATTTTGTCGTAGCTTCTTTTTACTTTATTGTCTAAATCT            
rJMSF030B14+          GAAAAATAGATTTTGTCGTAGCTTCTTTTTACTTTATTGTCTAAATCTGATCTAGAGGCT
                      ____________________________________________________________
consensus             GAAAAATAGATTTTGTCGTAGCTTCTTTTTACTTTATTGTCTAAATCTGATCTAGAGGCT