Contig 004289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020K01Sequence714007868 (3)ref|XP_002265990.1|9e-74PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera778004289 (3)ref|XP_002265990.1|5e-96PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera
JMSF029O05Sequence693007868 (3)ref|XP_002265990.1|1e-69PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera719004289 (3)ref|XP_009613429.1|5e-76PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Nicotiana tome
JMSF032F16Sequence665007868 (3)ref|XP_002265990.1|1e-73PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera794004289 (3)ref|XP_002265990.1|3e-96PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Vitis vinifera

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020K01+ GA
rJMSF032F16+ CAGTTGATAACAGTGA
                      ____________________________________________________________
consensus CAGTTGATAACAGTGA
 
. : . : . : . : . : . :
rJMSF020K01+ TGATGCAGTGCATCCTGCTCTGATGCCAGGACTATGCGCAAAAGGTGCCGTTTCGTATGA
rJMSF032F16+ TGATGCAGTGCATCCTGCTCTGATGCCAGGACTATGCGCAAAAGGTGCCGTTTCGTATGA
                      ____________________________________________________________
consensus TGATGCAGTGCATCCTGCTCTGATGCCAGGACTATGCGCAAAAGGTGCCGTTTCGTATGA
 
. : . : . : . : . : . :
rJMSF020K01+ GAAGCATAAAGACCTCTGGAGAGAGGTGGAGAGAGAAAAGGATGTCATGATACGGACAGA
rJMSF032F16+ GAAGCATAAAGACCTCTGGAGAGAGGTGGAGAGAGAAAAGGATGTCATGATACGGACAGA
                      ____________________________________________________________
consensus GAAGCATAAAGACCTCTGGAGAGAGGTGGAGAGAGAAAAGGATGTCATGATACGGACAGA
 
. : . : . : . : . : . :
rJMSF020K01+ GAAAGGACTGTATTTCAGACCTGCTTATGATGTTCGTCTAAGGGAGCCTCATGCAAAAAT
rJMSF032F16+ GAAAGGACTGTATTTCAGACCTGCTTATGATGTTCGTCTAAGGGAGCCTCATGCAAAAAT
rJMSF029O05+ GGACTGTATTTCAGACCTGCTTATGATGTTCGTCTAAGGGAGCCTCATGCAAAAAT
                      ____________________________________________________________
consensus GAAAGGACTGTATTTCAGACCTGCTTATGATGTTCGTCTAAGGGAGCCTCATGCAAAAAT
 
. : . : . : . : . : . :
rJMSF020K01+ ATCTGGAATTATTGGTGGAACTTTTGCTGCTTGGGTTGGTGGTGGAAATAACTCTCTCAT
rJMSF032F16+ ATCTGGAATTATTGGTGGAACTTTTGCTGCTTGGGTTGGTGGTGGAAATAACTCTCTCAT
rJMSF029O05+ ATCTGGAATTATTGGTGGAACTTTTGCTGCTTGGGTTGGTGGTGGAAATAACTCTCTCAT
                      ____________________________________________________________
consensus ATCTGGAATTATTGGTGGAACTTTTGCTGCTTGGGTTGGTGGTGGAAATAACTCTCTCAT
 
. : . : . : . : . : . :
rJMSF020K01+ TACAGAGTCAAGGGAGGATAGAGAGAACACTCCTTACTCTAGGAGGCGCCCCTTAGGTGT
rJMSF032F16+ TACAGAGTCAAGGGAGGATAGAGAGAACACTCCTTACTCTAGGAGGCGCCCCTTAGGTGT
rJMSF029O05+ TACAGAGTCAAGGGAGGATAGAGAGAACACTCCTTACTCTAGGAGGCGCCCCTTAGGTGT
                      ____________________________________________________________
consensus TACAGAGTCAAGGGAGGATAGAGAGAACACTCCTTACTCTAGGAGGCGCCCCTTAGGTGT
 
. : . : . : . : . : . :
rJMSF020K01+ TGATTTATTTGGCTCATTTTGCTACACTCTCCAGCATGGCAAATTCAGAAAGCGATATAA
rJMSF032F16+ TGATTTATTTGGCTCATTTTGCTACACTCTCCAGCATGGCAAATTCAGAAAGCGATATAA
rJMSF029O05+ TGATTTATTTGGCTCATTTTGCTACACTCTCCAGCATGGCAAATTCAGAAAGCGATATAA
                      ____________________________________________________________
consensus TGATTTATTTGGCTCATTTTGCTACACTCTCCAGCATGGCAAATTCAGAAAGCGATATAA
 
. : . : . : . : . : . :
rJMSF020K01+ CGACCTCACCAGAATAGATGCTCGCTTGGACGTCTCTTCTGCTGTAGCAATAGCCAAACG
rJMSF032F16+ CGACCTCACCAGAATAGATGCTCGCTTGGACGTCTCTTCTGCTGTAGCAATAGCCAAACG
rJMSF029O05+ CGACCTCACCAGAATAGATGCTCGCTTGGACGTCTCTTCTGCTGTAGCAATAGCCAAACG
                      ____________________________________________________________
consensus CGACCTCACCAGAATAGATGCTCGCTTGGACGTCTCTTCTGCTGTAGCAATAGCCAAACG
 
. : . : . : . : . : . :
rJMSF020K01+ GGTTTCAAGAATTTTCAGAAGTGCTTCCAACACAAGAGATTCACTGTCTACCCCCAGGCT
rJMSF032F16+ GGTTTCAAGAATTTTCAGAAGTGCTTCCAACACAAGAGATTCACTGTCTACCCCCAGGCT
rJMSF029O05+ GGTTTCAAGAATTTTCAGAAGTGCTTCCAACACAAGAGATTCACTGTCTACCCCCAGGCT
                      ____________________________________________________________
consensus GGTTTCAAGAATTTTCAGAAGTGCTTCCAACACAAGAGATTCACTGTCTACCCCCAGGCT
 
. : . : . : . : . : . :
rJMSF020K01+ GAACTTGATCTTTCAGCAGCAGGTTGCTGGACCAATCGTGTTTCGATTAGACTCAAGGTT
rJMSF032F16+ GAACTTGATCTTTCAGCAGCAGGTTGCTGGACCAATCGTGTTTCGATTAGACTCAAGGTT
rJMSF029O05+ GAACTTGATCTTTCAGCAGCAGGTTGCTGGACCAATCGTGTTTCGATTAGACTCAAGGTT
                      ____________________________________________________________
consensus GAACTTGATCTTTCAGCAGCAGGTTGCTGGACCAATCGTGTTTCGATTAGACTCAAGGTT
 
. : . : . : . : . : . :
rJMSF020K01+ TTGTATTGATTCAATATATGGGGTACCTGTCCCAAAATTAGAAGATTATGTGCTTAGCTT
rJMSF032F16+ TTGTATTGATTCAATATATGGGGTACCTGTCCCAAAATTAGAAGATTATGTGCTTAGCTT
rJMSF029O05+ TTGTATTGATTCAATATATGGGGTACCTGTCCCAAAATTAGAAGATTATGTGCTTAGCTT
                      ____________________________________________________________
consensus TTGTATTGATTCAATATATGGGGTACCTGTCCCAAAATTAGAAGATTATGTGCTTAGCTT
 
. : . : . : . : . : . :
rJMSF020K01+ GAACTACTCTCTTAGACTACTGCATTCTGGGAAAGTGGTGGCATGGTATTCTCCTAAGAG
rJMSF032F16+ GAACTACTCTCTTAGACTACTGCATTCTGGGAAAGTGGTGGCATGGTATTCTCCTAAGAG
rJMSF029O05+ GAACTACTCTCTTAGACTACTGCATTCTGGGAAAGTGGTGGCATGGTATTCTCCTAAGAG
                      ____________________________________________________________
consensus GAACTACTCTCTTAGACTACTGCATTCTGGGAAAGTGGTGGCATGGTATTCTCCTAAGAG
 
. : . : . : . : . : . :
rJMSF020K01+ GAAAGAGGCCATGGTTGAGTTGCGGCTATTTGAGTTTTGAAAATCTACTTCTTGTTTAAC
rJMSF032F16+ GAAAGAGGCCATGGTTGAGTTGCGGCTATTTGAGTTTTGAAAATCTACTTCTTGTTTAAC
rJMSF029O05+ GAAAGAGGCCATGGTTGAGTTGCGGCTATTTGAGTTTTGAAAATCTACTTCTTGTTTAAC
                      ____________________________________________________________
consensus GAAAGAGGCCATGGTTGAGTTGCGGCTATTTGAGTTTTGAAAATCTACTTCTTGTTTAAC
 
. : . : . : . : . : . :
rJMSF020K01+ TACTTTTTTGTAGTTAGGGTGGTTATGTTCGTTTGTATGCAAGCAATTCTATTGCC
rJMSF032F16+ TACTTTTTTGTAGTTAGGGTGGTTATGTTCGTTTGTATGCAAGCAATTCTATTGCC
rJMSF029O05+ TACTTTTTTGTAGTTAGGGTGGTTATGTTCGTTTGTATGCAAGCAATTCTATTGCCTGTG
                      ____________________________________________________________
consensus TACTTTTTTGTAGTTAGGGTGGTTATGTTCGTTTGTATGCAAGCAATTCTATTGCCTGTG
 
. : . : . : . : . : . :
rJMSF029O05+ ACTTTCACAAGGCTTAATCTTACCATGAAGCTCTTTAAATACTCCCATTCTTTCGGTCTT
                      ____________________________________________________________
consensus ACTTTCACAAGGCTTAATCTTACCATGAAGCTCTTTAAATACTCCCATTCTTTCGGTCTT