Contig 004287:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN034E02Sequence494004287 (3)ref|XP_009594504.1|135PREDICTED: uncharacterized protein LOC104090985 [Nicotiana tomentosiformis]
JMSF029A18Sequence658007926 (4)ref|XP_006349669.1|1e-35PREDICTED: uncharacterized protein LOC102584745 isoform X2 [Solanum tuberosum]657004287 (3)ref|XP_009594504.1|154PREDICTED: uncharacterized protein LOC104090985 [Nicotiana tomentosiformis]
JMSF032M07Sequence685007926 (4)ref|XP_006349669.1|9e-51PREDICTED: uncharacterized protein LOC102584745 isoform X2 [Solanum tuberosum]751004287 (3)ref|XP_009594504.1|210PREDICTED: uncharacterized protein LOC104090985 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF032M07+                       GAGTATATGGCATGGCTACAGTCAAATGCAGACAGTGAAGAAATATT
                      ____________________________________________________________
consensus                          GAGTATATGGCATGGCTACAGTCAAATGCAGACAGTGAAGAAATATT
 
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rJMSF032M07+          TTATCGAGACTCTTTTCAGAAAAGATGGCCTTCTTTGGTTGATGCTGAGAAGCAGATTCA
                      ____________________________________________________________
consensus             TTATCGAGACTCTTTTCAGAAAAGATGGCCTTCTTTGGTTGATGCTGAGAAGCAGATTCA
 
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rJMSF032M07+          GGCAGACACCAGTAAGTTACTTGGGAGGAAATATGAACTAAGCTCACGTGTGATGGCGGA
                      ____________________________________________________________
consensus             GGCAGACACCAGTAAGTTACTTGGGAGGAAATATGAACTAAGCTCACGTGTGATGGCGGA
 
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rJMSF032M07+          TTTTAGTCCCATGGCAGCTTCAAAATTGTTTGAGCAAGAAATACGTGAAGCGTTCTTGGG
rJMSF029A18+             TAGTCCCATGGCAGCTTCAAAATTGTTTGAGCAAGAAATACGTGAAGCGTTCTTGGG
                      ____________________________________________________________
consensus             TTTTAGTCCCATGGCAGCTTCAAAATTGTTTGAGCAAGAAATACGTGAAGCGTTCTTGGG
 
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rJMSF032M07+          GACTTTCGGTGGTCTTGGAGTAGCTGGTCTGTCTGCATCACTTTTGACATCTATTCTAAC
rJMSF029A18+          GACTTTCGGTGGTCTTGGAGTAGCTGGTCTGTCTGCATCACTTTTGACATCTATTCTAAC
                      ____________________________________________________________
consensus             GACTTTCGGTGGTCTTGGAGTAGCTGGTCTGTCTGCATCACTTTTGACATCTATTCTAAC
 
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rJMSF032M07+          AACAACATTAGAAGATCTTCTTGCTCTCGGCCTTTGTTCTGCGGGAGGTTTACTAGCGGT
JMFN034E02-                            TTCTTGCTCTCGGCCTTTGTTCTGCGGGAGGTTTACTAGCGGT
rJMSF029A18+          AACAACATTAGAAGATCTTCTTGCTCTCGGCCTTTGTTCTGCGGGAGGTTTACTAGCGGT
                      ____________________________________________________________
consensus             AACAACATTAGAAGATCTTCTTGCTCTCGGCCTTTGTTCTGCGGGAGGTTTACTAGCGGT
 
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rJMSF032M07+          CTCCAATTTCCCAGCCCGTAGGCAACAGGTTGTGAAAAAAGTGAAGAGAACCGGAGATGG
JMFN034E02-           CTCCAATTTCCCAGCCCGTAGGCAACAGGTTGTGAAAAAAGTGAAGAGAACCGGAGATGG
rJMSF029A18+          CTCCAATTTCCCAGCCCGTAGGCAACAGGTTGTGAAAAAAGTGAAGAGAACCGGAGATGG
                      ____________________________________________________________
consensus             CTCCAATTTCCCAGCCCGTAGGCAACAGGTTGTGAAAAAAGTGAAGAGAACCGGAGATGG
 
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rJMSF032M07+          CTTAGCACGAGAAATTGAAGAGGCAATGCAGAAGGATCTGTTGGAGACAATGGCGTATTT
JMFN034E02-           CTTAGCACGAGAAATTGAAGAGGCAATGCAGAAGGATCTGTTGGAGACAATGGCGTATTT
rJMSF029A18+          CTTAGCACGAGAAATTGAAGAGGCAATGCAGAAGGATCTGTTGGAGACAATGGCGTATTT
                      ____________________________________________________________
consensus             CTTAGCACGAGAAATTGAAGAGGCAATGCAGAAGGATCTGTTGGAGACAATGGCGTATTT
 
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rJMSF032M07+          GGAGGACATAGTGAAGTTCATCGGCAAGCCATATCAAGAAGCAGCGCAGAATAGACTGGA
JMFN034E02-           GGAGGACATAGTGAAGTTCATCGGCAAGCCATATCAAGAAGCAGCGCAGAATAGACTGGA
rJMSF029A18+          GGAGGACATAGTGAAGTTCATCGGCAAGCCATATCAAGAAGCAGCGCAGAATAGACTGGA
                      ____________________________________________________________
consensus             GGAGGACATAGTGAAGTTCATCGGCAAGCCATATCAAGAAGCAGCGCAGAATAGACTGGA
 
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rJMSF032M07+          TAAGCTTTTGGCGACTGCAGATAATCTGACCGATATCGAGAGCAAACTGAAAACATTGCA
JMFN034E02-           TAAGCTTTTGGCGACTGCAGATAATCTGACCGATATCGAGAGCAAACTGAAAACATTGCA
rJMSF029A18+          TAAGCTTTTGGCGACTGCAGATAATCTGACCGATATCGAGAGCAAACTGAAAACATTGCA
                      ____________________________________________________________
consensus             TAAGCTTTTGGCGACTGCAGATAATCTGACCGATATCGAGAGCAAACTGAAAACATTGCA
 
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rJMSF032M07+          AAATGAAATTCAAAATCTCCATGTATCATGATTCATGAATTAGGTTTTGGGAATATGCTT
JMFN034E02-           AAATGAAATTCAAAATCTCCATGTATCATGATTCATGAATTAGGTTTTGGGAATATGCTT
rJMSF029A18+          AAATGAAATTCAAAATCTCCATGTATCATGATTCATGAATTAGGTTTTGGGAATATGCTT
                      ____________________________________________________________
consensus             AAATGAAATTCAAAATCTCCATGTATCATGATTCATGAATTAGGTTTTGGGAATATGCTT
 
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rJMSF032M07+          CCACAGAGAAACAAAGGAGGAATCATCGGCATGTTGTCGAATGTACATGTATATAGCTGT
JMFN034E02-           CCACAGAGAAACAAAGGAGGAATCATCGGCATGTTGTCGAATGTACATGTATATAGCTGT
rJMSF029A18+          CCACAGAGAAACAAAGGAGGAATCATCGGCATGTTGTCGAATGTACATGTATATAGCTGT
                      ____________________________________________________________
consensus             CCACAGAGAAACAAAGGAGGAATCATCGGCATGTTGTCGAATGTACATGTATATAGCTGT
 
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rJMSF032M07+          GATGCCAATAACAAAATCGAATGTTGTATTAGTGCAGGAGT                   
JMFN034E02-           GATGCCAATAACAAAATCGAATGTTGTATTAGTGCAGGAGTTGATTGTTTAAAAAAACAT
rJMSF029A18+          GATGCCAATAACAAAATCGAATGTTGTATTAGTGCAGGAGTTGATTGTTTAAAAAAACAT
                      ____________________________________________________________
consensus             GATGCCAATAACAAAATCGAATGTTGTATTAGTGCAGGAGTTGATTGTTTAAAAAAACAT
 
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JMFN034E02-           TGATTGTTTTATTGAGTTTATTCTTCTTCAC                             
rJMSF029A18+          TGATTGTTTTATTGAGTTTATTCTTCTTCACATTCACATTCCAATGACCAATGGTGCTAT
                      ____________________________________________________________
consensus             TGATTGTTTTATTGAGTTTATTCTTCTTCACATTCACATTCCAATGACCAATGGTGCTAT