| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF011P06 | Sequence | 312 | 012026 (3) | gb|KHF97501.1| | 6e-08 | Maltoporin [Gossypium arboreum] | 675 | 004274 (4) | ref|XP_004243351.1| | 4e-46 | PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum] |
| JMSF018E01 | Sequence | 246 | 012026 (3) | ref|XP_006357482.1| | 2e-11 | PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum] | 779 | 004274 (4) | ref|XP_004243351.1| | 1e-53 | PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum] |
| JMSF025K15 | Sequence | 654 | 012026 (3) | ref|XP_006357482.1| | 1e-64 | PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum] | 779 | 004274 (4) | ref|XP_006367642.1| | 7e-53 | PREDICTED: adenylate cyclase, terminal-differentiation specific-like [Solanum t |
| JMSF032P13 | Sequence | 671 | 020034 | ref|XP_006357482.1| | 7e-64 | PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum] | 671 | 004274 (4) | ref|XP_004243351.1| | 4e-46 | PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF018E01+ CTCGACCAGGTGCNAGCAGCCCCGAGGGGGGAATCCGTTATGGGTATGCTGGTGCTGGGA
rJMSF025K15+ GTGCAAGCAGCCCCGAGGGGGGAATCCGTTATGGGTATGCTGGTGCTAGGA
____________________________________________________________
consensus CTCGACCAGGTGCAAGCAGCCCCGAGGGGGGAATCCGTTATGGGTATGCTGGTGCTGGGA
. : . : . : . : . : . :
rJMSF018E01+ AGCCAGTTCAGCCAGAAACTCCAGTTCAGCATCTCAAACCCACTCTTCGGGCACCTGGGG
rJMSF032P13+ GGGCACCTGGGG
rJMSF011P06+ GGGCACCTGGGG
rJMSF025K15+ AGCCAGTTCAGCCAGAAACTCCAGTTCAGCATCTCAAACCCACTCTTCGGGCACCTGGGG
____________________________________________________________
consensus AGCCAGTTCAGCCAGAAACTCCAGTTCAGCATCTCAAACCCACTCTTCGGGCACCTGGGG
. : . : . : . : . : . :
rJMSF018E01+ AGGGGTATGGACTCGGCACAGCCCATCCCTCCATTTCACAAGGTAATGGTTACGTGATCT
rJMSF032P13+ AGGGGTATGGACTCGGCACAGCCCATCCCTCCATTTCACAAGGTAATGGTTACGTGATCT
rJMSF011P06+ AGGGGTATGGACTCGGCACAGCCCATCCCTCCATTTCACAAGGTAATGGTTACGTGATCT
rJMSF025K15+ AGGGGTATGGACTCGGCACAGCCCATCCCTCCATTTCACAAGGTAATGGTTACGTGATCT
____________________________________________________________
consensus AGGGGTATGGACTCGGCACAGCCCATCCCTCCATTTCACAAGGTAATGGTTACGTGATCT
. : . : . : . : . : . :
rJMSF018E01+ ATGATGGGGAAGGGGCAAGGAGTCATTCAACCCCACATCCTCACTTCCCACAAGGTGGCT
rJMSF032P13+ ATGATGGGGAAGGGGCAAGGAGTCATTCAACCCCACATCCTCACTTCCCACAAGGTGGCT
rJMSF011P06+ ATGATGGGGAAGGGGCAAGGAGTCATTCAACCCCACATCCTCACTTCCCACAAGGTGGCT
rJMSF025K15+ ATGATGGGGAAGGGGCAAGGAGTCATTCAACCCCACATCCTCACTTCCCACAAGGTGGCT
____________________________________________________________
consensus ATGATGGGGAAGGGGCAAGGAGTCATTCAACCCCACATCCTCACTTCCCACAAGGTGGCT
. : . : . : . : . : . :
rJMSF018E01+ ATCCTCCATCAAGCTTCACTGCCCAGAACCCACAGCCAGCTCCTACTCCTCCTAGCACAA
rJMSF032P13+ ATCCTCCATCAAGCTTCACTGCCCAGAACCCACAGCCAGCTCCTACTCCTCCTAGCACAA
rJMSF011P06+ ATCCTCCATCAAGCTTCACTGCCCAGAACCCACAGCCAGCTCCTACTCCTCCTAGCACAA
rJMSF025K15+ ATCCTCCATCAAGCTTCACTGCCCAGAACCCACAGCCAGCTCCTACTCCTCCTAGCACAA
____________________________________________________________
consensus ATCCTCCATCAAGCTTCACTGCCCAGAACCCACAGCCAGCTCCTACTCCTCCTAGCACAA
. : . : . : . : . : . :
rJMSF018E01+ CTAATGCAATGGCTCGTCCACCACAGTTGATCCGCAACCATCCCTACAATGAATTAACCG
rJMSF032P13+ CTAATGCAATGGCTCGTCCACCACAGTTGATCCGCAACCATCCCTACAATGAATTAACCG
rJMSF011P06+ CTAATGCAATGGCTCGTCCACCACAGTTGATCCGCAACCATCCCTACAATGAATTAACCG
rJMSF025K15+ CTAATGCAATGGCTCGTCCACCACAGTTGATCCGCAACCATCCCTACAATGAATTAACCG
____________________________________________________________
consensus CTAATGCAATGGCTCGTCCACCACAGTTGATCCGCAACCATCCCTACAATGAATTAACCG
. : . : . : . : . : . :
rJMSF018E01+ AGAAATTCATGCACATGGGTTACAGGGGCGATCATGTCATAAATGTGATCCAAAAGCTGG
rJMSF032P13+ AGAAATTCATGCACATGGGTTACAGGGGCGATCATGTCATAAATGTGATCCAAAAGCTGG
rJMSF011P06+ AGAAATTCATGCACATGGGTTACAGGGGCGATCATGTCATAAATGTGATCCAAAAGCTGG
rJMSF025K15+ AGAAATTCATGCACATGGGTTACAGGGGCGATCATGTCATAAATGTGATCCAAAAGCTGG
____________________________________________________________
consensus AGAAATTCATGCACATGGGTTACAGGGGCGATCATGTCATAAATGTGATCCAAAAGCTGG
. : . : . : . : . : . :
rJMSF018E01+ AGGAGACCGGTCAGCCTGTTGATTTCAACACCGTGCTTGATCGATTGAATGGCCATTCTT
rJMSF032P13+ AGGAGACCGGTCAGCCTGTTGATTTCAACACCGTGCTTGATCGATTGAATGGCCATTCTT
rJMSF011P06+ AGGAGACCGGTCAGCCTGTTGATTTCAACACCGTGCTTGATCGATTGAATGGCCATTCTT
rJMSF025K15+ AGGAGACCGGTCAGCCTGTTGATTTCAACACCGTGCTTGATCGATTGAATGGCCATTCTT
____________________________________________________________
consensus AGGAGACCGGTCAGCCTGTTGATTTCAACACCGTGCTTGATCGATTGAATGGCCATTCTT
. : . : . : . : . : . :
rJMSF018E01+ CTGGTGCCCCCTATAGAGGATGGTAAGTAACCTTGAATCTTTCTAGCTGTCACGTTTCTG
rJMSF032P13+ CTGGTGCCCCCTATAGAGGATGGTAAGTAACCTTGAATCTTTCTAGCTGTCACGTTTCTG
rJMSF011P06+ CTGGTGCCCCCTATAGAGGATGGTAAGTAACCTTGAATCTTTCTAGCTGTCACGTTTCTG
rJMSF025K15+ CTGGTGCCCCCTATAGAGGATGGTAAGTAACCTTGAATCTTTCTAGCTGTCACGTTTCTG
____________________________________________________________
consensus CTGGTGCCCCCTATAGAGGATGGTAAGTAACCTTGAATCTTTCTAGCTGTCACGTTTCTG
. : . : . : . : . : . :
rJMSF018E01+ TGTTCTGAAAGACCATGGTTAAGGCAAACAACCATCTCGGTCTGTATCATTACGCCACAT
rJMSF032P13+ TGTTCTGAAAGACCATGGTTAAGGCAAACAACCATCTCGGTCTGTATCATTACGCCACAT
rJMSF011P06+ TGTTCTGAAAGACCATGGTTAAGGCAAACAACCATCTCGGTCTGTATCATTACGCCACAT
rJMSF025K15+ TGTTCTGAAAGACCATGGTTAAGGCAAACAACCATCTCGGTCTGTATCATTACGCCACAT
____________________________________________________________
consensus TGTTCTGAAAGACCATGGTTAAGGCAAACAACCATCTCGGTCTGTATCATTACGCCACAT
. : . : . : . : . : . :
rJMSF018E01+ TCACCCGGTGGTTTTGTCTACTATATATGCCTTGCGTTCAATAAAACTTGATACGATAGC
rJMSF032P13+ TCACCCGGTGGTTTTGTCTACTATATATGCCTTGCGTTCAATAAAACTTGATACGATAGC
rJMSF011P06+ TCACCCGGTGGTTTTGTCTACTATATATGCCTTGCGTTCAATAAAACTTGATACGATAGC
rJMSF025K15+ TCACCCGGTGGTTTTGTCTACTATATATGCCTTGCGTTCAATAAAACTTGATACGATAGC
____________________________________________________________
consensus TCACCCGGTGGTTTTGTCTACTATATATGCCTTGCGTTCAATAAAACTTGATACGATAGC
. : . : . : . : . : . :
rJMSF018E01+ ATGGGAATTTGGTATGTATAAAATCAAGAGGTGCACTATATTATTTGTTGTGGCCTCTTC
rJMSF032P13+ ATGGGAATTTGGTATGTATAAAATCAAGAGGTGCACTATATTATTTGTTGTGGCCTCTTC
rJMSF011P06+ ATGGGAATTTGGTATGTATAAAATCAAGAGGTGCACTATATTATTTGTTGTGGCCTCTTC
rJMSF025K15+ ATGGGAATTTGGTATGTATAAAATCAAGAGGTGCACTATATTATTTGTTGTGGCCTCTTC
____________________________________________________________
consensus ATGGGAATTTGGTATGTATAAAATCAAGAGGTGCACTATATTATTTGTTGTGGCCTCTTC
. : . : . : . : . : . :
rJMSF018E01+ CCTGCTTTCTTATACATTGTAAGGTTATGTTCTTTGATATATATATTTCAATGACGAC
rJMSF032P13+ CCTGCTTTCTTATACATTGTAAGGTTATGTTCTTTGATATATATATTTCAATGACGAC
rJMSF011P06+ CCTGCTTTCTTATACATTGTAAGGTTATGTTCTTTGATATATATATTTCAATGACGAC
rJMSF025K15+ CCTGCTTTCTTATACATTGTAAGGTTATGTTCTTTGATATATATATTTCAATGACGACAT
____________________________________________________________
consensus CCTGCTTTCTTATACATTGTAAGGTTATGTTCTTTGATATATATATTTCAATGACGACAT