Contig 004272:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025D03-                                                GACTCTATCACTTCCAAAGTCGA
rJMSF025D03+                                                      TCACTTCCAAAGTCGA
                      ____________________________________________________________
consensus                                                  GACTCTATCACTTCCAAAGTCGA
 
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JMSF025D03-           ATTCATTATTCTCGCCATCCTCTTTCAAGCCGCACGCACATCCATATCTCCCCTTCGTCG
rJMSF025D03+          ATTCATTATTCTCGCCATCCTCTTTCAAGCCGCACGCACATCCATATCTCCCCTTCGTCG
                      ____________________________________________________________
consensus             ATTCATTATTCTCGCCATCCTCTTTCAAGCCGCACGCACATCCATATCTCCCCTTCGTCG
 
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JMSF025D03-           TTCGGGCCACCGCCACCGGCGACGATTCCGCCTCCGAAACTGAAGAAGAAGAAGCGGACG
rJMSF025D03+          TTCGGGCCACCGCCACCGGCGACGATTCCGCCTCCGAAACTGAAGAAGAAGAAGCGGACG
                      ____________________________________________________________
consensus             TTCGGGCCACCGCCACCGGCGACGATTCCGCCTCCGAAACTGAAGAAGAAGAAGCGGACG
 
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JMSF025D03-           ACTTCGAGTCGCGCCTCTCCAACGTCCGTATTAAGTACCGGAGCGGGCTGGGGAAGAAAG
rJMSF025D03+          ACTTCGAGTCGCGCCTNTCCAACGTCCGTATTAAGTACCGGAGCGGGCTGGGGAAGAAAG
                      ____________________________________________________________
consensus             ACTTCGAGTCGCGCCTCTCCAACGTCCGTATTAAGTACCGGAGCGGGCTGGGGAAGAAAG
 
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JMSF025D03-           CAGAGCGCAGAAAGTCTCGGCAAGGGAAGAAGGTGGCGTCGGAGTCGGGATCCGGAATGT
rJMSF025D03+          CAGAGCGCAGAAAGTCTCGGCAAGGGAAGAAGGTGGCGTNGGAGTCGGGATCCGGAATGT
                      ____________________________________________________________
consensus             CAGAGCGCAGAAAGTCTCGGCAAGGGAAGAAGGTGGCGTCGGAGTCGGGATCCGGAATGT
 
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JMSF025D03-           ACCTCCCGCCGGTGTCGCTGCGGGAGGCGGTTTCCGAAGGGCTGAGCGTGGAATTCGGGT
rJMSF025D03+          ACCTCCCGCCGGTGTCGCTGCGGGAGGCGGTTTCCGAAGGGCTGAGCGTGGAATTCGGGT
                      ____________________________________________________________
consensus             ACCTCCCGCCGGTGTCGCTGCGGGAGGCGGTTTCCGAAGGGCTGAGCGTGGAATTCGGGT
 
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JMSF025D03-           TCACCCCGTTTTCGGAACGGGTCAACGGCCGGATTGCGATTCTGGGCATAACCGCTTTGG
rJMSF025D03+          TCNCCCCGTTTTCGGAACGGGTCAACGGCCGGATTGCGATTNTGGGCATAACCGCTTTGG
                      ____________________________________________________________
consensus             TCACCCCGTTTTCGGAACGGGTCAACGGCCGGATTGCGATTCTGGGCATAACCGCTTTGG
 
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JMSF025D03-           TATTGGTGGAGCTGGCGACGGGGCAGGGCGTTATAAAGTATCATACGCCGTCGATAGTTC
rJMSF025D03+          TATTGGTGGAGCTGGCGACGGGGCAGGGCGTTATAAAGTATCNTACGCCGTCGATAGTTN
                      ____________________________________________________________
consensus             TATTGGTGGAGCTGGCGACGGGGCAGGGCGTTATAAAGTATCATACGCCGTCGATAGTTC
 
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JMSF025D03-           TAATTCAGGTTTACTTCGTGGCGGCGGTGGCGGCGTTGTACGTTAAGTACGAGAAGGAAA
rJMSF025D03+          TAATTCAGGTTTACTTCGTGGCGGCGGTGGCGGCGTTGTACGTTAAGTACGAGAAGGAAA
                      ____________________________________________________________
consensus             TAATTCAGGTTTACTTCGTGGCGGCGGTGGCGGCGTTGTACGTTAAGTACGAGAAGGAAA
 
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JMSF025D03-           AAGTTAGTGTGTGGCCATCAGACAAATGAAAATCATCGTTGCCTTTAATTTATTTTTTTT
rJMSF025D03+          AAGTTAGTGTGTGGCCNTCNGACAAATGAAAATCATCGTTGCCTTTAATTTATTTTTTTT
                      ____________________________________________________________
consensus             AAGTTAGTGTGTGGCCATCAGACAAATGAAAATCATCGTTGCCTTTAATTTATTTTTTTT
 
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JMSF025D03-           TTTCCAGCAAAAAATTGTGAAATTGCCT                                
rJMSF025D03+          TTTCCAGCAAAAAATTGTGAAATTGCCTTATACTGTTATATATATTCCAATGTTTTAGTT
                      ____________________________________________________________
consensus             TTTCCAGCAAAAAATTGTGAAATTGCCTTATACTGTTATATATATTCCAATGTTTTAGTT