Contig 004269:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024M09-                                        TATTGCATCCACACACATATATATATTTCA
                      ____________________________________________________________
consensus                                           TATTGCATCCACACACATATATATATTTCA
 
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JMFN017E20+                      ATTCAAGAAAGATGATTGAGGATTAATATGNCGATGATACGATGAAGAC
rJMSF024M09-          CAGCTTCAAATATTCAAGAAAGATGATTGAGGATTAATATGACGATGATACGATGAAGAC
                      ____________________________________________________________
consensus             CAGCTTCAAATATTCAAGAAAGATGATTGAGGATTAATATGACGATGATACGATGAAGAC
 
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JMFN017E20+           GAAGATCAAGCCAAGAATNTGTGGAATAGTGATTTGAATTTCTCCATCTCTTTAGGGGGC
rJMSF024M09-          GAAGATCAAGCCAAGAATTTGTGGAATAGTGATTTGAATTTCTCCATCTCTTTAGGGGGC
                      ____________________________________________________________
consensus             GAAGATCAAGCCAAGAATTTGTGGAATAGTGATTTGAATTTCTCCATCTCTTTAGGGGGC
 
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JMFN017E20+           AGAGCGACCAACACATTCACTCCGCTGTTGCTTTTTCCGCCATTATCGATGTCAGGAAAC
rJMSF024M09-          AGAGCGACCAACACATTCACTCCGCTGTTGCTTTTTCCGCCATTATCGATGTCAGGAAAC
                      ____________________________________________________________
consensus             AGAGCGACCAACACATTCACTCCGCTGTTGCTTTTTCCGCCATTATCGATGTCAGGAAAC
 
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JMFN017E20+           AGCAGGATTATGTCCTTCCGATGATAAACCACAGGGCAACTGTACTTAGGTTTTCCCCAT
rJMSF024M09-          AGCAGGATTATGTCCTTCCGATGATAAACCACAGGGCAACTGTACTTAGGTTTTCCCCAT
                      ____________________________________________________________
consensus             AGCAGGATTATGTCCTTCCGATGATAAACCACAGGGCAACTGTACTTAGGTTTTCCCCAT
 
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JMFN017E20+           GGAAACTGCACTCCTTCAAACCCTAATCTCCACCACGACGACACCAGGAACTCGCCGTGA
rJMSF024M09-          GGAAACTGCACTCCTTCAAACCCTAATCTCCACCACGACGACACCAGGAACTCGCCGTGA
                      ____________________________________________________________
consensus             GGAAACTGCACTCCTTCAAACCCTAATCTCCACCACGACGACACCAGGAACTCGCCGTGA
 
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JMFN017E20+           GGGAACCCTTTGTAAAGCTCTCCCCAGTCGATCGCCGACCGGGCGTACTCGTCGGTCATC
rJMSF024M09-          GGGAACCCTTTGTAAAGCTCTCCCCAGTCGATCGCCGACCGGGCGTACTCGTCGGTCATC
                      ____________________________________________________________
consensus             GGGAACCCTTTGTAAAGCTCTCCCCAGTCGATCGCCGACCGGGCGTACTCGTCGGTCATC
 
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JMFN017E20+           CTCGCCGCCCCCTCGTAAACCATCTGCACCGTCTTCCAGAACGGGCCTTCTTCCAGCTCC
rJMSF024M09-          CTCGCCGCCCCCTCGTAAACCATCTGCACCGTCTTCCAGAACGGGCCTTCTTCCAGCTCC
                      ____________________________________________________________
consensus             CTCGCCGCCCCCTCGTAAACCATCTGCACCGTCTTCCAGAACGGGCCTTCTTCCAGCTCC
 
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JMFN017E20+           GCGCACTTCGCGGAACCGTATCCGGTGAGCACGGCGTTGCCGGAGTAGGAATCCGGCAGC
rJMSF024M09-          GCGCACTTCGCGGAACCGTATCCGGTGAGCACGGCGTTGCCGGAGTAGGAATCCGGCAGC
                      ____________________________________________________________
consensus             GCGCACTTCGCGGAACCGTATCCGGTGAGCACGGCGTTGCCGGAGTAGGAATCCGGCAGC
 
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JMFN017E20+           GGCGGGTTCAGCCGCCGGCGGATGTCCACCGCGAAGAGCACGGTGGAGAGGCGATCGGAG
rJMSF024M09-          GGCGGGTTCAGCCGCCGGCGGATGTCCACCGCGAAGAGCACGGTGGAGAGGCGATCGGAG
                      ____________________________________________________________
consensus             GGCGGGTTCAGCCGCCGGCGGATGTCCACCGCGAAGAGCACGGTGGAGAGGCGATCGGAG
 
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JMFN017E20+           TTGTTCTCCCCGCCGAGGCACGACAGCGCCTTGCACCTCCATATGGCGGCGGTCAAAACG
rJMSF024M09-          TTGTTCTCCCCGCCGAGGCACGACAGCGCCTTGCACCTCCATATGGCGGCGGTCAAAACG
                      ____________________________________________________________
consensus             TTGTTCTCCCCGCCGAGGCACGACAGCGCCTTGCACCTCCATATGGCGGCGGTCAAAACG
 
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JMFN017E20+           TTGAAACCTGTGACCTTGGTTTTGACGTTGTCGGG                         
rJMSF024M09-          TTGAAACCTGTGACCTTGGTTTTGACGTTGTCGGGCGCCTTGGCCTTGTCCTTCAGCCTC
                      ____________________________________________________________
consensus             TTGAAACCTGTGACCTTGGTTTTGACGTTGTCGGGCGCCTTGGCCTTGTCCTTCAGCCTC