| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015E04 | Sequence | 584 | 003658 (7) | ref|XP_004237540.1| | 141 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 332 | 004264 (7) | ref|XP_003597231.1| | 6e-04 | Protein disulfide isomerase L-2 [Medicago truncatula] gb|AES67482.1| protein dis |
| JMFF027G14 | Sequence | 580 | 003658 (7) | ref|XP_004237540.1| | 143 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 724 | 004264 (7) | ref|XP_009613613.1| | 318 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMFF032C17 | Sequence | 536 | 003658 (7) | ref|XP_004237540.1| | 114 | PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum] | 782 | 004264 (7) | ref|XP_009613613.1| | 355 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF013F16 | Sequence | 478 | 003658 (7) | emb|CDP04357.1| | 8e-18 | unnamed protein product [Coffea canephora] | 773 | 004264 (7) | ref|XP_009613613.1| | 317 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF021D22 | Sequence | 644 | 003658 (7) | ref|XP_009613613.1| | 180 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 781 | 004264 (7) | ref|XP_009613613.1| | 353 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF021N11 | Sequence | 648 | 003658 (7) | ref|XP_009613613.1| | 206 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 746 | 004264 (7) | ref|XP_009613613.1| | 300 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
| JMSF031M11 | Sequence | 633 | 003658 (7) | ref|XP_009613613.1| | 197 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] | 682 | 004264 (7) | ref|XP_009613613.1| | 267 | PREDICTED: protein disulfide isomerase-like 1-4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF013F16+ GTATCAGAATACNTTGGTGTTACAGGAGATGCTCCACAGGTCATCGCTTAT
rJMSF021D22+ GAAANCCAGTATCAGAATACTTTGGTGTTACAGGAGATGCTCCACAGGTCATCGCTTAT
rJMFF032C17+ GTATCAGAATACTTTGGTGTTACAGGAGATGCTCCACAGGTCATCGCTTAT
____________________________________________________________
consensus GAAANCCAGTATCAGAATACTTTGGTGTTACAGGAGATGCTCCACAGGTCATCGCTTAT
. : . : . : . : . : . :
rJMSF013F16+ ACCGGNAAATGATGATGGCAGGAAGTTCTTATTGGAAGATGAATTGACCTCAATCAATAT
rJMSF021D22+ ACCGG-AAATGATGATGGCAGGAAGTTCTTATTGGAAGATGAATTGACCTCAATCAATAT
rJMFF032C17+ ACCGG-AAATGATGATGGCAGGAAGTTCTTATTGGAAGATGAATTGACCTCAATCAATAT
rJMFF027G14+ AAATGATGATGGCAGGAAGTTCTTATTGGAAGATGAATTGACCTCAATCAATAT
rJMSF021N11+ GAAGATGAATTGACCTCAATCAATAT
____________________________________________________________
consensus ACCGG-AAATGATGATGGCAGGAAGTTCTTATTGGAAGATGAATTGACCTCAATCAATAT
. : . : . : . : . : . :
rJMSF013F16+ CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
rJMSF021D22+ CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
rJMFF032C17+ CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
rJMFF027G14+ CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
rJMSF031M11+ TTTACAAGTCAGAACC
rJMSF021N11+ CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
____________________________________________________________
consensus CAAGTCCTTCGGAGAGAAGTTTTTGGAAGACAATCTAAAGCCCTTTTACAAGTCAGAACC
. : . : . : . : . : . :
rJMSF013F16+ CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
rJMSF021D22+ CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
rJMFF032C17+ CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
rJMFF027G14+ CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
rJMSF031M11+ CATTCCTGAGAAGAATGATGGNGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
rJMSF021N11+ CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
____________________________________________________________
consensus CATTCCTGAGAAGAATGATGGTGATGTCAAAATTGTGGTTGGAAATAACTTCGACGAAAT
. : . : . : . : . : . :
rJMSF013F16+ TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
rJMSF021D22+ TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
rJMFF032C17+ TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
rJMFF027G14+ TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
rJMSF031M11+ TGTTCTNGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
rJMSF021N11+ TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
____________________________________________________________
consensus TGTTCTTGATGAATCTAAAGACGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCACTG
. : . : . : . : . : . :
rJMSF013F16+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
rJMSF021D22+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
rJMFF032C17+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
rJMFF027G14+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
rJMSF031M11+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
rJMSF021N11+ CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
____________________________________________________________
consensus CCAATCACTAGAACCTATATATAACAAGCTCGGCAAGCATTTGAAGGGAATTGACTCGCT
. : . : . : . : . : . :
rJMSF013F16+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
rJMSF021D22+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
rJMFF032C17+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
rJMFF027G14+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
rJMSF031M11+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
rJMSF021N11+ TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
____________________________________________________________
consensus TGTTATTGCCAAGATGGATGGGACAACGAACGAGCACCCTAGAGCAAAGTCTGATGGATT
. : . : . : . : . : . :
rJMSF013F16+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
rJMSF021D22+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
rJMFF032C17+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
rJMFF027G14+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
rJMSF031M11+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
rJMSF021N11+ CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
____________________________________________________________
consensus CCCGACACTTCTTTTCTTCCCAGCTGGGAACAAGAGCTTCGAGCCACTTACTGTGGATAC
. : . : . : . : . : . :
rJMSF013F16+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMSF021D22+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMFF032C17+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMFF027G14+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMFF015E04+ GTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMSF031M11+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
rJMSF021N11+ TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
____________________________________________________________
consensus TGATCGCACTGTGGTCGCCTTCTACAAATTCCTAAAGAAGCATGCGTCGATTCCTTTCAA
. : . : . : . : . : . :
rJMSF013F16+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMSF021D22+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMFF032C17+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMFF027G14+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMFF015E04+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMSF031M11+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
rJMSF021N11+ GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
____________________________________________________________
consensus GATTCAAAAACCGGCTTCGTCTCAGGAATCTGAGACTGAAACGCCAACGAGCCAGGAGAC
. : . : . : . : . : . :
rJMSF013F16+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMSF021D22+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMFF032C17+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMFF027G14+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMFF015E04+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMSF031M11+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
rJMSF021N11+ TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATCAACTGTGAGAATATTTAGC
____________________________________________________________
consensus TACTACTACTACTACCACTACCACTGGTGATGTAAAGGATGAACTGTGAGAATATTTAGC
. : . : . : . : . : . :
rJMSF013F16+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMSF021D22+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMFF032C17+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMFF027G14+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMFF015E04+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMSF031M11+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
rJMSF021N11+ GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
____________________________________________________________
consensus GTAGATTATAGCGGTTCCAGCATAGATCCCAGAACAAATTCTGCTTTAACAGAGAAAAGA
. : . : . : . : . : . :
rJMSF013F16+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTGA
rJMSF021D22+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTGA
rJMFF032C17+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTGA
rJMFF027G14+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTGA
rJMFF015E04+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTTG
rJMSF031M11+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTTG
rJMSF021N11+ GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTTG
____________________________________________________________
consensus GGGTGTAAGGAGTAAAGGCAATAGAAAACAACAAATTTATATTAGAAATGAGAAATGTGA
. : . : . : . : . : . :
rJMSF013F16+ AC
rJMSF021D22+ AC
rJMFF032C17+ AC
rJMFF027G14+ AC
rJMFF015E04+ AACCAGTAGTGTCTGTTTTATAAACTCCTTTTTCTTTTCCCCCTA
rJMSF031M11+ AACCAGTAGTGTCTGTTTTATAAACTCCTTTTTCTTTTCCCCCTAACTTCCTCTTCTT
rJMSF021N11+ AACCAGTAGTGTCTGTTTTATAAACTCCTTTTTCTTTTCCCCCTAACTTCCTCTTCTTTG
____________________________________________________________
consensus ACCCAGTAGTGTCTGTTTTATAAACTCCTTTTTCTTTTCCCCCTAACTTCCTCTTCTTTG