Contig 004263:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021I14+                                                              TTCAAAAG
                      ____________________________________________________________
consensus                                                                 TTCAAAAG
 
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rJMSF002L12+                                                                     A
rJMSF021I14+          TGCCCCAACCTATGTGAATTGGGAATTATGGCTGATCAGGCAGTATGCAAACGTGATATA
                      ____________________________________________________________
consensus             TGCCCCAACCTATGTGAATTGGGAATTATGGCTGATCAGGCAGTATGCAAACGTGATATA
 
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rJMSF002L12+          GAAGCTGCTTCAAGACTTTTGGAGGATCCAGATGGTTGCTTTATTGTTCAGGATCTAAAG
rJMSF021I14+          GAAGCTGCTTCAAGTCTTTTGGAGGATCTAGATGGTTGCTTTATTGTTCAGGATCTAAAG
                      ____________________________________________________________
consensus             GAAGCTGCTTCAAGTCTTTTGGAGGATCTAGATGGTTGCTTTATTGTTCAGGATCTAAAG
 
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rJMSF002L12+          ATGCTTAACACAATCAAGATTGAATCATTTAGGGGATTCACAGTCGAAACGCTTTTTGTA
rJMSF021I14+          ATGCTTAACACAATCAAGATTGAATCATTTAATGGATCAACAAATGAAATGCTTTTTGTA
                      ____________________________________________________________
consensus             ATGCTTAACACAATCAAGATTGAATCATTTAGTGGATTCACAGTTGAAATGCTTTTTGTA
 
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rJMSF002L12+          AAAATGCTGCTCTCAAAATCCCCCGCGCTAGAGGAAGTTGTTATTATGGAATGTGTTGAT
rJMSF021I14+          AAATTGCTGCTCTCAAATTCCCCCGCACTAGAGAAAGTTGTTATTATGGAATATCATTAT
                      ____________________________________________________________
consensus             AAATTGCTGCTCTCAAATTCCCCCGCGCTAGAGGAAGTTGTTATTATGGAATGTGTTTAT
 
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rJMSF002L12+          ATTGACACATCTATAGCTGTCAAAAGCCTAAGGGAGTTGTTACGTTTTCCTCGTGCATCT
rJMSF021I14+          ATTGACAGATCCGTAGCTGTCAGAAGCCAAAGGGAGTTGTTGCGTTTTCCTCGTGCATCT
                      ____________________________________________________________
consensus             ATTGACAGATCTGTAGCTGTCAGAAGCCTAAGGGAGTTGTTGCGTTTTCCTCGTGCATCT
 
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rJMSF002L12+          CCAAAAGCCCAAATTGTTTGCATGGAACACGTTTATTCCATGATGGGTTGGACCATGGGC
rJMSF021I14+          CCAAAAGCCCAAATTATTTGCATGGAACACGATCGCTCTATGTTGGGTTGGGCCATGGGC
                      ____________________________________________________________
consensus             CCAAAAGCCCAAATTGTTTGCATGGAACACGTTTGTTCTATGTTGGGTTGGGCCATGGGC
 
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rJMSF002L12+          GAATTGTGGTCAACGGGGATTTGCTAGAGTGTGCCGAAAGATGCAAAGATGATAAAAGCG
rJMSF021I14+          GAATTGTGGTCAATAGGGGCTT----------------TGATGTAAAGATGATAAAAGCG
                      ____________________________________________________________
consensus             GAATTGTGGTCAATGGGGGTTTGCTAGAGTGTGCCGAATGATGTAAAGATGATAAAAGCG
 
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rJMSF002L12+          TAGCTCTGGTGAGCATGATAAATGACATTCGATCTCTTGCGCCATGC----CGGCTGCCG
rJMSF021I14+          TAGCTCTGGTGAACATGATAAATGACAGTCGATCTCTTGCGCCATGCCTGTCGGCCGCCG
                      ____________________________________________________________
consensus             TAGCTCTGGTGAGCATGATAAATGACATTCGATCTCTTGCGCCATGCCTGTCGGCTGCCG
 
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rJMSF002L12+          TGTTAAGAAATTTACTCTATGCACTCCTTGTGGAGTAAGAAACCTATCCTAT------TA
rJMSF021I14+          TGTTAAGAAATTTACTCTCTGCACTCCCTGTGGAGTAAGAAACCGATCCTATAGAGTATA
                      ____________________________________________________________
consensus             TGTTAAGAAATTTACTCTCTGCACTCCTTGTGGAGTAAGAAACCTATCCTATAGAGTATA
 
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rJMSF002L12+          TATTTGGCAATCATGATT---NGTTTTCTTAATTTCCTCATGGTTGGTACTTAATTTTCA
rJMSF021I14+          TATTTGGCAATCATGATTTTCTTTTTCCTTAATTTCCTCATGGTT-GTACTTAATTTTCA
                      ____________________________________________________________
consensus             TATTTGGCAATCATGATTTTCTTTTTTCTTAATTTCCTCATGGTTGGTACTTAATTTTCA
 
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rJMSF002L12+          TTTCTTGTTGAGTTGTAGACATG----AGATAAGACGTTCGGAGGATCTTGATTGAAGAT
rJMSF021I14+          TTTCTTGTTAAGTTGTAGACGTGTTTATCTGATGAGATAAGGACTTTAGGAATTGAGTAT
                      ____________________________________________________________
consensus             TTTCTTGTTGAGTTGTAGACGTGTTTATGTTATGAGGTTCGGAGTTTCTTGATTGAGTAT
 
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rJMSF002L12+          TGAACAAC                                                    
rJMSF021I14+          TGTGCAGCTCCATTGCATGGTTTAAAGTAGAAATGTAATCAATGGTTGTCCTGAATTGTT
                      ____________________________________________________________
consensus             TGTGCAGCTCCATTGCATGGTTTAAAGTAGAAATGTAATCAATGGTTGTCCTGAATTGTT
 
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rJMSF021I14+          GTAAACATCTGTAAGACCAAGGATGACATCTTATTTTGCTAAGCAGTAGACCCTGAAGAA
                      ____________________________________________________________
consensus             GTAAACATCTGTAAGACCAAGGATGACATCTTATTTTGCTAAGCAGTAGACCCTGAAGAA