Contig 004260:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043C03+                                                                TGTTCC
                      ____________________________________________________________
consensus                                                                   TGTTCC
 
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rJMSF043C03+          AGACGACAAAAGGACAGACCACATACCATCTACTGCTTCTTACAGCTTAGTGGAGTGCGT
                      ____________________________________________________________
consensus             AGACGACAAAAGGACAGACCACATACCATCTACTGCTTCTTACAGCTTAGTGGAGTGCGT
 
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rJMSF043C03+          ACATGATCTGCTTGACCTTGCTGCTAGGATGCTCGTCATGGGTGGGCGATTGGTGTATTT
rJMSF021A13+                              CTGCTAGGATGCTCGTCATGGGTGGGCGATTGGTGTATTT
                      ____________________________________________________________
consensus             ACATGATCTGCTTGACCTTGCTGCTAGGATGCTCGTCATGGGTGGGCGATTGGTGTATTT
 
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rJMSF043C03+          TTTCCCAGTGTTAAGAGACGATGAATCAATTACTCCTACATTTCCAGAACACCCTTGTTT
rJMSF021A13+          TTTCCCAGTGTTAAGAGACGATGAATCAATTACTCCTACATTTCCAGAACACCCTTGTTT
                      ____________________________________________________________
consensus             TTTCCCAGTGTTAAGAGACGATGAATCAATTACTCCTACATTTCCAGAACACCCTTGTTT
 
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rJMSF043C03+          CAGATTGGTTGCCTCCTCTGAGCAGATACTAAGCTTAAGATACAGCCGGGTACTGCTTAC
rJMSF021A13+          CAGATTGGTTGCCTCCTCTGAGCAGATACTAAGCTTAAGATACAGCCGGGTACTGCTTAC
                      ____________________________________________________________
consensus             CAGATTGGTTGCCTCCTCTGAGCAGATACTAAGCTTAAGATACAGCCGGGTACTGCTTAC
 
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rJMSF043C03+          CATGGTGAAAACCGGGCCTTATACTGAAGATATCGCAGAGGCAGCAAGAATCAAACATTT
rJMSF021A13+          CATGGTGAAAACCGGGCCTTATACTGAAGATATCGCAGAGGCAGCAAGAATCAAACATTT
                      ____________________________________________________________
consensus             CATGGTGAAAACCGGGCCTTATACTGAAGATATCGCAGAGGCAGCAAGAATCAAACATTT
 
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rJMSF043C03+          GGAGTTCAAGGCGAACCATCTGAAGTGGTTGGAAGAAGGTAATCTTCATTCCGCAGTTTT
rJMSF021A13+          GGAGTTCAAGGCGAACCATCTGAAGTGGTTGGAAGAAGGTAATCTTCATTCCGCAGTTTT
                      ____________________________________________________________
consensus             GGAGTTCAAGGCGAACCATCTGAAGTGGTTGGAAGAAGGTAATCTTCATTCCGCAGTTTT
 
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rJMSF043C03+          CAGTCCTGCTGACTCGAAGCTTAATGAGTCGGGTGAAACGAAAGTAAGTAAAGATGCAAA
rJMSF021A13+          CAGTCCTGCTGACTCGAAGCTTAATGAGTCGGGTGAAACGAAAGTAAGTAAAGATGCAAA
                      ____________________________________________________________
consensus             CAGTCCTGCTGACTCGAAGCTTAATGAGTCGGGTGAAACGAAAGTAAGTAAAGATGCAAA
 
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rJMSF043C03+          GCCTAGATACAGAGGCAAATATGTCTAGGTAGACTGACATTCTACAGCCCAACTTCAAGT
rJMSF021A13+          GCCTAGATACAGAGGCAAATATGTCTAGGTAGACTGACATTCTACAGCCCAACTTCAAGT
                      ____________________________________________________________
consensus             GCCTAGATACAGAGGCAAATATGTCTAGGTAGACTGACATTCTACAGCCCAACTTCAAGT
 
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rJMSF043C03+          TCACTGGTTTACAGTTTACACCTTTTTGATTGTCCGCTGCCTGGGTTGCAATCCTCGCTC
rJMSF021A13+          TCACTGGTTTACAGTTTACACCTTTTTGATTGTCCGCTGCCTGGGTTGCAATCCTCGCTC
                      ____________________________________________________________
consensus             TCACTGGTTTACAGTTTACACCTTTTTGATTGTCCGCTGCCTGGGTTGCAATCCTCGCTC
 
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rJMSF043C03+          CTTATGATCTTGTTGTCATTGTTTGACCTAGATTTCTGATCGTGTTGTCGTTGTTTGACC
rJMSF021A13+          CTTATGATCTTGTTGTCATTGTTTGACCTAGATTTCTGATCGTGTTGTCGTTGTTTGACC
                      ____________________________________________________________
consensus             CTTATGATCTTGTTGTCATTGTTTGACCTAGATTTCTGATCGTGTTGTCGTTGTTTGACC
 
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rJMSF043C03+          TAGATTTATGTAGTACTGTTGTTCACTTTTTCTCTTGTATCCAAAAGAAAAGTTCAATTT
rJMSF021A13+          TAGATTTATGTAGTACTGTTGTTCACTTTTTCTCTTGTATCCAAAAGAAAAGTTCAATTT
                      ____________________________________________________________
consensus             TAGATTTATGTAGTACTGTTGTTCACTTTTTCTCTTGTATCCAAAAGAAAAGTTCAATTT
 
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rJMSF043C03+          TGTAGTGTAATAACTAAAATGTATTTTCAGTTTGGCTTAGATAAGCATACAGAAATATTG
rJMSF021A13+          TGTAGTGTAATAACTAAAATGTATTTTCAGTTTGGCTTAGATAAGCATACAGAAATATTG
                      ____________________________________________________________
consensus             TGTAGTGTAATAACTAAAATGTATTTTCAGTTTGGCTTAGATAAGCATACAGAAATATTG
 
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rJMSF043C03+          CTT                                                         
rJMSF021A13+          CTTGTTTTAGAGCTTAGTCATTTTATGCACTGTTTGCCCCTCCCATCATCATCATCATCA
                      ____________________________________________________________
consensus             CTTGTTTTAGAGCTTAGTCATTTTATGCACTGTTTGCCCCTCCCATCATCATCATCATCA
 
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rJMSF021A13+          TCTATCCTCTCCAAACTTCTGTTCTTCAGTGATTATGGGACTTGTATTTCTGAGTCTCTT
                      ____________________________________________________________
consensus             TCTATCCTCTCCAAACTTCTGTTCTTCAGTGATTATGGGACTTGTATTTCTGAGTCTCTT