Contig 004257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020M12Sequence631011993 (7)ref|NP_001142479.1|3e-105uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot737004257 (2)ref|XP_006356169.1|3e-05PREDICTED: N-alpha-acetyltransferase 15, NatA auxiliary subunit-like [Solanum t
JMSF050A07Sequence641011993 (7)ref|NP_001142479.1|2e-115uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot694004257 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020M12+ TACATACTTTGGAGGTT
                      ____________________________________________________________
consensus TACATACTTTGGAGGTT
 
. : . : . : . : . : . :
rJMSF050A07+ CTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
rJMSF020M12+ CTCGCAGCTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
                      ____________________________________________________________
consensus CTCGCAGCTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
 
. : . : . : . : . : . :
rJMSF050A07+ GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
rJMSF020M12+ GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
                      ____________________________________________________________
consensus GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
 
. : . : . : . : . : . :
rJMSF050A07+ TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
rJMSF020M12+ TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
                      ____________________________________________________________
consensus TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
 
. : . : . : . : . : . :
rJMSF050A07+ TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
rJMSF020M12+ TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
                      ____________________________________________________________
consensus TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
 
. : . : . : . : . : . :
rJMSF050A07+ ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
rJMSF020M12+ ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
                      ____________________________________________________________
consensus ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
 
. : . : . : . : . : . :
rJMSF050A07+ GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
rJMSF020M12+ GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
                      ____________________________________________________________
consensus GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
 
. : . : . : . : . : . :
rJMSF050A07+ CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
rJMSF020M12+ CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
                      ____________________________________________________________
consensus CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
 
. : . : . : . : . : . :
rJMSF050A07+ TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
rJMSF020M12+ TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
                      ____________________________________________________________
consensus TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
 
. : . : . : . : . : . :
rJMSF050A07+ AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
rJMSF020M12+ AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
                      ____________________________________________________________
consensus AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
 
. : . : . : . : . : . :
rJMSF050A07+ GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
rJMSF020M12+ GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
                      ____________________________________________________________
consensus GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
 
. : . : . : . : . : . :
rJMSF050A07+ GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
rJMSF020M12+ GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
                      ____________________________________________________________
consensus GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
 
. : . : . : . : . : . :
rJMSF050A07+ TATGAAAAAAAAATAC
rJMSF020M12+ TATGAAAAAAAAATACCAGTGATTTAATGATGTCTTGTTTGTTCTTTTTCCGCTGAAACA
                      ____________________________________________________________
consensus TATGAAAAAAAAATACCAGTGATTTAATGATGTCTTGTTTGTTCTTTTTCCGCTGAAACA