Contig 004257:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020M12+                                                     TACATACTTTGGAGGTT
                      ____________________________________________________________
consensus                                                        TACATACTTTGGAGGTT
 
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rJMSF050A07+                 CTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
rJMSF020M12+          CTCGCAGCTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
                      ____________________________________________________________
consensus             CTCGCAGCTCAGCAACCATCGGTTTATCCCACCACCTGATAAGACAGACTTCTGAAAATG
 
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rJMSF050A07+          GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
rJMSF020M12+          GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
                      ____________________________________________________________
consensus             GGGTAGCCAGCCTAAGTACTGATCAAGATAATGCAGCTTCCGTTTCATCAAATGGGAGAT
 
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rJMSF050A07+          TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
rJMSF020M12+          TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
                      ____________________________________________________________
consensus             TACAGAAACTGGAAGGATTCAAAGATCTTGTCATCTAATTATACCCCACTCAAACTGAGC
 
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rJMSF050A07+          TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
rJMSF020M12+          TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
                      ____________________________________________________________
consensus             TAACACTTGTCAGGAAGAATACTAGGCTGAAGAAAAGACTATGGTGGTGTAGAACCTAAG
 
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rJMSF050A07+          ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
rJMSF020M12+          ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
                      ____________________________________________________________
consensus             ATACATAGTACCATATGGAAACAGAAAAAAAATTCAGAGGTGAGATTTAAGACCTTCACA
 
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rJMSF050A07+          GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
rJMSF020M12+          GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
                      ____________________________________________________________
consensus             GTGGGGGCTTATTAGAGAAACCAGATGTATTGTAGCTCCTGGACTCCATTTTCATATTTG
 
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rJMSF050A07+          CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
rJMSF020M12+          CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
                      ____________________________________________________________
consensus             CTGCTGTTCTACGTCAGTCTGGGTGCTTTCTTTTCTGACTGTATATACGCTCCAGTGTGC
 
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rJMSF050A07+          TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
rJMSF020M12+          TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
                      ____________________________________________________________
consensus             TGTGAGTAGTCACATTCTTTAGTTGCTGAAATGCTGCATTTTCATATTTGCTGCCGTCGT
 
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rJMSF050A07+          AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
rJMSF020M12+          AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
                      ____________________________________________________________
consensus             AACATTTTTGGACGACGGAGTCCTTTAAAGTATAGGGGTTTATGCCCCTGCCTACCTTCA
 
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rJMSF050A07+          GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
rJMSF020M12+          GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
                      ____________________________________________________________
consensus             GCTTAGAACAATCACCCATTTTTCTTGAGCATGTTGTATTTTTTCCTTTTCCATTTCGTG
 
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rJMSF050A07+          GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
rJMSF020M12+          GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
                      ____________________________________________________________
consensus             GGCCATTATTTGGTGTACTAGTATTTTACGTGGGAATTTTTTTCTTTCATTATATATTTG
 
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rJMSF050A07+          TATGAAAAAAAAATAC                                            
rJMSF020M12+          TATGAAAAAAAAATACCAGTGATTTAATGATGTCTTGTTTGTTCTTTTTCCGCTGAAACA
                      ____________________________________________________________
consensus             TATGAAAAAAAAATACCAGTGATTTAATGATGTCTTGTTTGTTCTTTTTCCGCTGAAACA