| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001E21 | Sequence | 324 | 000541 (4) | 798 | 004255 (5) | dbj|BAO96226.1| | 2e-106 | sugar-porter family protein 7, partial [Solanum lycopersicum] | |||
| JMSF011D16 | Sequence | 219 | 017775 | gb|KJB47011.1| | 3e-23 | hypothetical protein B456_008G006300 [Gossypium raimondii] gb|KJB47012.1| hypoth | 738 | 004255 (5) | gb|EYU43551.1| | 2e-127 | hypothetical protein MIMGU_mgv1a005532mg [Erythranthe guttata] |
| JMSF019P14 | Sequence | 498 | 000541 (4) | ref|XP_002270927.2| | 9e-33 | PREDICTED: sugar transporter ERD6-like 7 [Vitis vinifera] gb|ADP37173.1| putativ | 744 | 004255 (5) | dbj|BAO96226.1| | 3e-94 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
| JMSF039N14 | Sequence | 677 | 000541 (4) | ref|XP_009614908.1| | 4e-76 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | 889 | 004255 (5) | dbj|BAO96226.1| | 7e-158 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
| JMSF052L15 | Sequence | 613 | 000541 (4) | ref|XP_009614908.1| | 6e-70 | PREDICTED: sugar transporter ERD6-like 7 [Nicotiana tomentosiformis] | 934 | 004255 (5) | dbj|BAO96226.1| | 3e-152 | sugar-porter family protein 7, partial [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF052L15+ GTGAGGTATATCTTTTAGCGTAATGATAA
____________________________________________________________
consensus GTGAGGTATATCTTTTAGCGTAATGATAA
. : . : . : . : . : . :
rJMSF052L15+ GCGTTTGATCCAAACAAGNTGAGATAAAATGTGTTTCTATCTGTAGGCAAAGATTGGGCA
rJMSF039N14+ GGCAAAGATTGGGCA
____________________________________________________________
consensus GCGTTTGATCCAAACAAGNTGAGATAAAATGTGTTTCTATCTGTAGGCAAAGATTGGGCA
. : . : . : . : . : . :
rJMSF052L15+ TCAGAAGGAGTTTGAGAATTCACTACGTGCACTTCGAGGCAAAGATGCTGACATTTCTAA
rJMSF039N14+ TCAGAAGGAGTTTGAGAATTCACTACGTGCACTTCGAGGCAAAGATGCTGACATTTCTAA
____________________________________________________________
consensus TCAGAAGGAGTTTGAGAATTCACTACGTGCACTTCGAGGCAAAGATGCTGACATTTCTAA
. : . : . : . : . : . :
rJMSF052L15+ AGAGGCAGCTGAAATCATGGATTACATAGAAACCCTTGAAAAGCTCCCAAAAGCCAAATT
rJMSF011D16+ CCCAAAAGCCAAATT
rJMSF039N14+ AGAGGCAGCTGAAATCATGGATTACATAGAAACCCNTGAAAAGCTCCCAAAAGCCAAATT
____________________________________________________________
consensus AGAGGCAGCTGAAATCATGGATTACATAGAAACCCTTGAAAAGCTCCCAAAAGCCAAATT
. : . : . : . : . : . :
rJMSF052L15+ GCTAGATTTGTTTCAAAGAAGATACTTGCGCTCAGTCACTATCGGGGTTGGACTAATGGT
rJMSF011D16+ GCTAGATTTGTTTCAAAGAAGATACTTGCGCTCAGTCACTATCGGGGTTGGACTAATGGT
rJMSF039N14+ GCTAGATTTGTTTCAAAGAAGATACTTGCGCTCAGTCACTATCGGGGTTGGACTAATGGT
rJMSF001E21+ TGGACTAATGGT
____________________________________________________________
consensus GCTAGATTTGTTTCAAAGAAGATACTTGCGCTCAGTCACTATCGGGGTTGGACTAATGGT
. : . : . : . : . : . :
rJMSF052L15+ GTGCCAACAATTTGGTGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTTGAATC
rJMSF011D16+ GTGCCAACAATTTGGTGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTTGAATC
rJMSF039N14+ GTGCCAACAATTTGGTGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTTGAATC
rJMSF001E21+ GTGCCAACAA-TTGGTGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTTGGATC
rJMSF019P14+ TCTACACCAGCAGTATATTTGAATC
____________________________________________________________
consensus GTGCCAACAATTTGGTGGAATTAATGGAATCTGTTTCTACACCAGCAGTATATTTGAATC
. : . : . : . : . : . :
rJMSF052L15+ CTCAGGGTTCCCTTCAGATGTTGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
rJMSF011D16+ CTCAGGGTTCCCTTCAGATGTTGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
rJMSF039N14+ CTCAGGGTTCCCTTCAGATGTTGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
rJMSF001E21+ CTCAGGGTTCCCTTCAGATGTTGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
rJMSF019P14+ CTCAGGGTT-CCTTCAGATGTNGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
____________________________________________________________
consensus CTCAGGGTTCCCTTCAGATGTTGGAACTATAATCTATGCGATTCTTCAGGTTATAATCAC
. : . : . : . : . : . :
rJMSF052L15+ TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
rJMSF011D16+ TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
rJMSF039N14+ TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
rJMSF001E21+ TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
rJMSF019P14+ TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
____________________________________________________________
consensus TGCATTAGGGGCAACCTTAATAGACAGAGCCGGAAGAAAGCCTCTATTAGTGGTTTCTGG
. : . : . : . : . : . :
rJMSF052L15+ GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
rJMSF011D16+ GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
rJMSF039N14+ GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
rJMSF001E21+ GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
rJMSF019P14+ GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
____________________________________________________________
consensus GTCAGGACTTGTCATTGGCTGTGCACTGACAGGCATCTCATTCTATATGAAGGGACATGA
. : . : . : . : . : . :
rJMSF052L15+ AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
rJMSF011D16+ AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
rJMSF039N14+ AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
rJMSF001E21+ AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
rJMSF019P14+ AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
____________________________________________________________
consensus AATAGCTGTCAATGCATCACCATTACTTGCTGTAACAGGGATACTGGTGTACATCGGATC
. : . : . : . : . : . :
rJMSF052L15+ ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
rJMSF011D16+ ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
rJMSF039N14+ ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
rJMSF001E21+ ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
rJMSF019P14+ ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
____________________________________________________________
consensus ATTTTCAGCAGGTATGGGGGCAGTCCCATGGGTAGTGATGTCTGAGATATTTCCTATAAA
. : . : . : . : . : . :
rJMSF052L15+ TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
rJMSF011D16+ TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
rJMSF039N14+ TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
rJMSF001E21+ TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
rJMSF019P14+ TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
____________________________________________________________
consensus TATTAAAGGGGTTGCTGGAAGCCTTGCAACACTAGTGAATTGGTTTGGTGCATGGTTATG
. : . : . : . : . : . :
rJMSF052L15+ CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
rJMSF011D16+ CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
rJMSF039N14+ CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
rJMSF001E21+ CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
rJMSF019P14+ CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
____________________________________________________________
consensus CTCCTACACTTTCAACTTCCTCATGGAATGGAGCTCTTTTGGTACTTTTTTTCTGTATGC
. : . : . : . : . : . :
rJMSF052L15+ AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
rJMSF011D16+ AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
rJMSF039N14+ AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
rJMSF001E21+ AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
rJMSF019P14+ AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
____________________________________________________________
consensus AGTAATCAATGCCCTTGCCATTTTATTCGTGATCAAGATAGTACCCGAAACCAAAGGAAA
. : . : . : . : . : . :
rJMSF052L15+ AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
rJMSF011D16+ AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
rJMSF039N14+ AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
rJMSF001E21+ AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
rJMSF019P14+ AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
____________________________________________________________
consensus AACCTTAGAACAAATACAGGCCGCTATCAATGCATGACATCTGATCTATTCTTTCCTTTT
. : . : . : . : . : . :
rJMSF052L15+ TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAACTTTGTAT
rJMSF011D16+ TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAAC
rJMSF039N14+ TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAACTTTGTAT
rJMSF001E21+ TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAACTTTGTAT
rJMSF019P14+ TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAACTTTGTAT
____________________________________________________________
consensus TCTTTTCAGTAGGAAATTGAAGAGGAAGATTATTCGTAGGGATGAATGATAACTTTGTAT
. : . : . : . : . : . :
rJMSF052L15+ GTCAT
rJMSF039N14+ GTCAT
rJMSF001E21+ GTCATGTACTAGTATATTTATAATAAGAAAGATAATCATTTCACAAACTTTAAAAGAAGT
rJMSF019P14+ GTCATGTACTAGTATATTTATAATAAGAAAGATAATCATTTCACAAACTTTAAAAGAAGT
____________________________________________________________
consensus GTCATGTACTAGTATATTTATAATAAGAAAGATAATCATTTCACAAACTTTAAAAGAAGT
. : . : . : . : . : . :
rJMSF001E21+ GTTTTCATTTTTCAAATGTTAGATTAAATCGTGACAATCTTAGCCATTAATTGGTATGCA
rJMSF019P14+ GTTTTCATTTTTCAAATGTTAGATTAAATCGTGACAATCTTAGCCATTAATTGGTATGCA
____________________________________________________________
consensus GTTTTCATTTTTCAAATGTTAGATTAAATCGTGACAATCTTAGCCATTAATTGGTATGCA