| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS123H07 | Sequence | 571 | 004254 (3) | gb|KDO50371.1| | 1e-91 | hypothetical protein CISIN_1g020011mg [Citrus sinensis] | |||||
| JMSF019K18 | Sequence | 541 | 005056 (2) | ref|XP_006368293.1| | 1e-14 | dehydration-responsive family protein [Populus trichocarpa] gb|ERP64862.1| dehyd | 750 | 004254 (3) | ref|XP_011092623.1| | 6e-85 | PREDICTED: probable methyltransferase PMT20 [Sesamum indicum] ref|XP_011092624.1 |
| JMSF048A01 | Sequence | 686 | 005056 (2) | ref|XP_006368294.1| | 2e-59 | hypothetical protein POPTR_0001s01380g [Populus trichocarpa] gb|ERP64863.1| hypo | 773 | 004254 (3) | ref|XP_011092623.1| | 2e-98 | PREDICTED: probable methyltransferase PMT20 [Sesamum indicum] ref|XP_011092624.1 |
This contig is upended
. : . : . : . : . : . :
JMFS123H07- GGCTTTTGGGTCC
____________________________________________________________
consensus GGCTTTTGGGTCC
. : . : . : . : . : . :
JMFS123H07- TCTCTGGTCCTCCAGTGAACTACGAGAATCGCTGGAGAGGATGGAACACCACTATCGAAG
____________________________________________________________
consensus TCTCTGGTCCTCCAGTGAACTACGAGAATCGCTGGAGAGGATGGAACACCACTATCGAAG
. : . : . : . : . : . :
JMFS123H07- AGCAGAAATCAGATTACGAGAAGCTGCAAGACTTGCTTACTTCGATTTGTTTCAAACTTT
____________________________________________________________
consensus AGCAGAAATCAGATTACGAGAAGCTGCAAGACTTGCTTACTTCGATTTGTTTCAAACTTT
. : . : . : . : . : . :
JMFS123H07- ATGACAAAAAGGGCGACATTGCCGTTTGGCAAAAGTTATCGGACAATAGTTGCTATAAGC
____________________________________________________________
consensus ATGACAAAAAGGGCGACATTGCCGTTTGGCAAAAGTTATCGGACAATAGTTGCTATAAGC
. : . : . : . : . : . :
JMFS123H07- AGCTCGATAGCCCTGGTAGCTACCCGCCAAAATGCGATGATAGCATGGAACCGGATTCCG
____________________________________________________________
consensus AGCTCGATAGCCCTGGTAGCTACCCGCCAAAATGCGATGATAGCATGGAACCGGATTCCG
. : . : . : . : . : . :
JMFS123H07- CGTGGTACACGCCACTTCGGACTTGTGTTGTGGTACCAAACCCGAACTCGAGGAAAGTAT
____________________________________________________________
consensus CGTGGTACACGCCACTTCGGACTTGTGTTGTGGTACCAAACCCGAACTCGAGGAAAGTAT
. : . : . : . : . : . :
JMFS123H07- CGTTAGAGTCGTTGCCAAAGTGGCCAGGAAGGTTGCACACTGCTCCAGAACGAGTTATGG
____________________________________________________________
consensus CGTTAGAGTCGTTGCCAAAGTGGCCAGGAAGGTTGCACACTGCTCCAGAACGAGTTATGG
. : . : . : . : . : . :
JMFS123H07- ATGTTCGTGGAGGGAGCGAGGGGACCTTTAGACACGACGATAGTAAATGGAAAATGCGAG
rJMSF048A01+ TTAGACACGACGATAGTAAATGGAAAATGCGAG
____________________________________________________________
consensus ATGTTCGTGGAGGGAGCGAGGGGACCTTTAGACACGACGATAGTAAATGGAAAATGCGAG
. : . : . : . : . : . :
JMFS123H07- TGAAGCACTACATGACGCTGCTACCCGGGCTCGGGAGTGATGAGATAAGAAATGTGATGG
rJMSF048A01+ TGAAGCACTACATGACGCTGCTACCCGGGCTCGGGAGTGATGAGATAAGAAATGTGATGG
rJMSF019K18+ TCGGGAGTGATGAGATAAGAAATGTGATGG
____________________________________________________________
consensus TGAAGCACTACATGACGCTGCTACCCGGGCTCGGGAGTGATGAGATAAGAAATGTGATGG
. : . : . : . : . : . :
JMFS123H07- AC--GAACACATTATTCGGGGGGTTTGCCGCTTCTCTGGTGGATGAGCCTCTGTGGGTTA
rJMSF048A01+ ACATGAACACATTATTCGGGGGGTTTGCCGCTTCTCTGGTGGATGAGCCTCTGTGGGTTA
rJMSF019K18+ ACATGAACACNTTATTCGGGGGGTTTGCCGCTTCTCTGGTGGATGAGCCTCTGTGGGTTA
____________________________________________________________
consensus ACATGAACACATTATTCGGGGGGTTTGCCGCTTCTCTGGTGGATGAGCCTCTGTGGGTTA
. : . : . : . : . : . :
JMFS123H07- TGAACGTCGTTTCTTCCTAT
rJMSF048A01+ TGAACGTCGTTTCTTCCTATTCGTTAAATACACTTCCTGTGATATACGACAGGGGTCTCA
rJMSF019K18+ TGAACGTCGTTTCTTCCTATTCGTTAAATACACTTCCTGTGATATACGACAGGGGTCTCA
____________________________________________________________
consensus TGAACGTCGTTTCTTCCTATTCGTTAAATACACTTCCTGTGATATACGACAGGGGTCTCA
. : . : . : . : . : . :
rJMSF048A01+ TTGGTATCTACCATGACTGGTGCGAGGCGTTTTCAACATATCCTAGAACATACGATCTAC
rJMSF019K18+ TTGGTATCTACCATGACTGGTGCGAGGCGTTTTCAACATATCCTAGAACATACGATCTAC
____________________________________________________________
consensus TTGGTATCTACCATGACTGGTGCGAGGCGTTTTCAACATATCCTAGAACATACGATCTAC
. : . : . : . : . : . :
rJMSF048A01+ TTCATGCCGATGGCCTTTTCACTGCTGAAAGCCATAGATGTGAAATGAAGTACGTTCTTT
rJMSF019K18+ TTCATGCCGATGGCCTTTTCACTGCTGAAAGCCATAGATGTGAAATGAAGTACGTTCTTT
____________________________________________________________
consensus TTCATGCCGATGGCCTTTTCACTGCTGAAAGCCATAGATGTGAAATGAAGTACGTTCTTT
. : . : . : . : . : . :
rJMSF048A01+ TAGAAATGGATCGGATCTTGAGGCCAAAGGGGTACGCCTTAATCCGTGAGGCAAGGCAAT
rJMSF019K18+ TAGAAATGGATCGGATCTTGAGGCCAAAGGGGTACGCCTTAATCCGTGAGGCAAGGCAAT
____________________________________________________________
consensus TAGAAATGGATCGGATCTTGAGGCCAAAGGGGTACGCCTTAATCCGTGAGGCAAGGCAAT
. : . : . : . : . : . :
rJMSF048A01+ TTGTGGACACTATTGCGGCCATAGCTAAGAAGATGAGATGGGCGTGTCATACAGAAGACA
rJMSF019K18+ TTGTGGACACTATTGCGGCCATAGCTAAGAAGATGAGATGGGCGTGTCATACAGAAGACA
____________________________________________________________
consensus TTGTGGACACTATTGCGGCCATAGCTAAGAAGATGAGATGGGCGTGTCATACAGAAGACA
. : . : . : . : . : . :
rJMSF048A01+ CAGAAGATGGCGTAAGAACCGAGAAGGTGTTGATCTGTCAAAAGGACCTCTGGCATTCTT
rJMSF019K18+ CAGAAGATGGCGTAAGAACCGAGAAGGTGTTGATCTGTCAAAAGGACCTCTGGCATTCTT
____________________________________________________________
consensus CAGAAGATGGCGTAAGAACCGAGAAGGTGTTGATCTGTCAAAAGGACCTCTGGCATTCTT
. : . : . : . : . : . :
rJMSF048A01+ CTAAGCAGAGTTCAATATGAAAGAAAAGAAACCAGAAGTTTTGTGAAGAGTAAGTTGTGC
rJMSF019K18+ CTAAGCAGAGTTCAATATGAAAGAAAAGAAACCAGAAGTTTTGTGAAGAGTAAGTTGTGC
____________________________________________________________
consensus CTAAGCAGAGTTCAATATGAAAGAAAAGAAACCAGAAGTTTTGTGAAGAGTAAGTTGTGC
. : . : . : . : . : . :
rJMSF048A01+ ACTTGCTCACACAGAAACCATTTTTTGTTCTTAAGATAGCAGAAAAGAGAATTTTCAATA
rJMSF019K18+ ACTTGCTCACACAGAAACCATTTTTTGTTCTTAAGATAGCAGAAAAGAGAATTTTCAATA
____________________________________________________________
consensus ACTTGCTCACACAGAAACCATTTTTTGTTCTTAAGATAGCAGAAAAGAGAATTTTCAATA
. : . : . : . : . : . :
rJMSF048A01+ AGGAATCCATTTTTCTGCTCTCTTTTTCTCTTTAGAGCCAGCAAATGCAATGGTGTGTAA
rJMSF019K18+ AGGAATCCATTTTTCTGCTCTCTTTTTCTCTTTAGAGCCAGCAAATGCAATGGTGTGTAA
____________________________________________________________
consensus AGGAATCCATTTTTCTGCTCTCTTTTTCTCTTTAGAGCCAGCAAATGCAATGGTGTGTAA
. : . : . : . : . : . :
rJMSF048A01+ TCTGTTTTTGAACCATTGCATACCTTATTTATGTAAGAAGTTCATTTTTTAAGTATTAAT
rJMSF019K18+ TCTGTTTTTGAACCATTGCATACCTTATTTATGTAAGAAGTTCATTTTTTAAGTATTAAT
____________________________________________________________
consensus TCTGTTTTTGAACCATTGCATACCTTATTTATGTAAGAAGTTCATTTTTTAAGTATTAAT
. : . : . : . : . : . :
rJMSF048A01+ GAAAA
rJMSF019K18+ GAAAATTGGAAACTCCAATGTGTACTCTTGCTCGAGTCCTATTGGAGGAAGAATCTCATG
____________________________________________________________
consensus GAAAATTGGAAACTCCAATGTGTACTCTTGCTCGAGTCCTATTGGAGGAAGAATCTCATG