Contig 004253:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019H11Sequence516013332 (2)ref|XP_009771280.1|7e-68PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana sylvestris]731004253 (2)ref|XP_009771279.1|1e-70PREDICTED: glucan endo-1,3-beta-glucosidase 12-like, partial [Nicotiana sylvest
JMSF047O06Sequence684002446 (5)ref|XP_009628415.1|4e-103PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Nicotiana tomentosiformis]741004253 (2)ref|XP_008379673.1|6e-115PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047O06+ TTAAAGTACGATGACATCAAAATGGTGGTGACTGAAACCGGCTGGCC
                      ____________________________________________________________
consensus TTAAAGTACGATGACATCAAAATGGTGGTGACTGAAACCGGCTGGCC
 
. : . : . : . : . : . :
rJMSF047O06+ GTCCAAAGGCGACTCCAAAGAAGTCGGCGCCGGCGTAGAGAACGCCGCCGCGTACAACGG
                      ____________________________________________________________
consensus GTCCAAAGGCGACTCCAAAGAAGTCGGCGCCGGCGTAGAGAACGCCGCCGCGTACAACGG
 
. : . : . : . : . : . :
rJMSF047O06+ CAACCTGGTGCGCCGAGTGCTCACCGGCGGCGGGACCCCCTTAAGACCTCACGAAGAACT
                      ____________________________________________________________
consensus CAACCTGGTGCGCCGAGTGCTCACCGGCGGCGGGACCCCCTTAAGACCTCACGAAGAACT
 
. : . : . : . : . : . :
rJMSF047O06+ CACCGTATACCTCTTCGCCCTCTTCAACGAGAACAAGAAGATCGGGCCGTCGTCGGAGAG
                      ____________________________________________________________
consensus CACCGTATACCTCTTCGCCCTCTTCAACGAGAACAAGAAGATCGGGCCGTCGTCGGAGAG
 
. : . : . : . : . : . :
rJMSF047O06+ AAACTTCGGACTGTTCTACCCGAACGGGAAAAAAGTCTACGACATACCGTTCACAACGCA
                      ____________________________________________________________
consensus AAACTTCGGACTGTTCTACCCGAACGGGAAAAAAGTCTACGACATACCGTTCACAACGCA
 
. : . : . : . : . : . :
rJMSF047O06+ AGGGCTAAAGGGGTACCACGACAGGCGGTCTCCGGCCGTCGGCGGCCACATTCTCTCCAA
                      ____________________________________________________________
consensus AGGGCTAAAGGGGTACCACGACAGGCGGTCTCCGGCCGTCGGCGGCCACATTCTCTCCAA
 
. : . : . : . : . : . :
rJMSF047O06+ ATCGGCTCGGGGAAAGACATGGTGCGTGGCAAACGGGAAAGCCGGGAAAGAAAAACTTCA
rJMSF019H11+ AGACGTGGTGCGTGGCGAACGGGGAAGCGGGAAAAGAAAGGCTGCA
                      ____________________________________________________________
consensus ATCGGCTCGGGGAAAGACGTGGTGCGTGGCGAACGGGGAAGCGGGGAAAGAAAGGCTTCA
 
. : . : . : . : . : . :
rJMSF047O06+ GGCCGGTCTAGACTTCGCTTGCGGAGAAGGTGGAGTTGATTGCCGTTCGATCCAACCGGG
rJMSF019H11+ GGCGGGTCTAGACTACGCTTGCGGTGAGGGCGGGGCGGACTGCCGTTCGATCCAGCCGGG
                      ____________________________________________________________
consensus GGCGGGTCTAGACTTCGCTTGCGGTGAGGGTGGGGTTGATTGCCGTTCGATCCAGCCGGG
 
. : . : . : . : . : . :
rJMSF047O06+ TTCCACGTGTTACAATCCTAACACTCTTGAGGCCCACGCTTCGTTCGCGTTCAACAGTTA
rJMSF019H11+ ATCCACGTGCTACAATCCTAACACTCTAGAGGCGCACGCTTCGTTCGCTTTCAACAGTTA
                      ____________________________________________________________
consensus TTCCACGTGTTACAATCCTAACACTCTTGAGGCGCACGCTTCGTTCGCTTTCAACAGTTA
 
. : . : . : . : . : . :
rJMSF047O06+ TTATCAGAAGAAGGG
rJMSF019H11+ CTATCAGAGGAAGGGGCGTGCCGGCGGCACGTGCTACTTCGGCGGGGCCGCCTACGTTGT
                      ____________________________________________________________
consensus TTATCAGAGGAAGGGGCGTGCCGGCGGCACGTGCTACTTCGGCGGGGCCGCCTACGTTGT
 
. : . : . : . : . : . :
rJMSF019H11+ CATGCAACAACCTAAATTTGGGAACTGTGAATTACCCACTGAAGATTGAACACCCCCATA
                      ____________________________________________________________
consensus CATGCAACAACCTAAATTTGGGAACTGTGAATTACCCACTGAAGATTGAACACCCCCATA
 
. : . : . : . : . : . :
rJMSF019H11+ GGCCATAGCAGACTTTGATGACCAAAAAGTCCAAAACTTTATTGGATTTTGAATGAAGTG
                      ____________________________________________________________
consensus GGCCATAGCAGACTTTGATGACCAAAAAGTCCAAAACTTTATTGGATTTTGAATGAAGTG
 
. : . : . : . : . : . :
rJMSF019H11+ TAGTGCATAGATGCTACTACTAGAGTGTCTATGGAAATTACTGCGCTTATCTATCCAGGA
                      ____________________________________________________________
consensus TAGTGCATAGATGCTACTACTAGAGTGTCTATGGAAATTACTGCGCTTATCTATCCAGGA
 
. : . : . : . : . : . :
rJMSF019H11+ ATCACCATAGTTACTGTTGGGTTTAGTGAATTCATTTTTGTGATTGTGGGGGGGAAAACT
                      ____________________________________________________________
consensus ATCACCATAGTTACTGTTGGGTTTAGTGAATTCATTTTTGTGATTGTGGGGGGGAAAACT
 
. : . : . : . : . : . :
rJMSF019H11+ AATGTAATGTGTATTAAGTTGTTACATAGTACTCTGTAATTTCTTTTCCCTTTTCATTGT
                      ____________________________________________________________
consensus AATGTAATGTGTATTAAGTTGTTACATAGTACTCTGTAATTTCTTTTCCCTTTTCATTGT
 
. : . : . : . : . : . :
rJMSF019H11+ CTACTGCTAGTACTACTTACAGCTTATAATGTTGATTAATCTCTGTAGTGCATTCAGTTG
                      ____________________________________________________________
consensus CTACTGCTAGTACTACTTACAGCTTATAATGTTGATTAATCTCTGTAGTGCATTCAGTTG