Contig 004252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036C11Sequence470010902 (6)ref|XP_009758418.1|2e-33PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]679004252 (7)gb|ABO87603.1|4e-67chloroplast ATP/ADP translocator [Pisum sativum]
JMFS050H01Sequence512004252 (7)gb|ABO87603.1|5e-72chloroplast ATP/ADP translocator [Pisum sativum]
JMFS142E03Sequence597004252 (7)gb|ABO87603.1|4e-129chloroplast ATP/ADP translocator [Pisum sativum]
JMSF015F20Sequence224010902 (6)782004252 (7)gb|ABO87603.1|6e-89chloroplast ATP/ADP translocator [Pisum sativum]
JMSF019F10Sequence227010902 (6)822004252 (7)gb|ABO87603.1|9e-101chloroplast ATP/ADP translocator [Pisum sativum]
JMSF021F03Sequence609010902 (6)ref|XP_009758418.1|5e-63PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]805004252 (7)gb|ABO87603.1|2e-100chloroplast ATP/ADP translocator [Pisum sativum]
JMSF047H21Sequence705010902 (6)ref|XP_009758418.1|2e-84PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]810004252 (7)gb|ABO87603.1|4e-95chloroplast ATP/ADP translocator [Pisum sativum]

Alignment

This contig is upended


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JMFS142E03- AGCATCAACCTTGTTGAGGTTACATGGAA
                      ____________________________________________________________
consensus AGCATCAACCTTGTTGAGGTTACATGGAA
 
. : . : . : . : . : . :
JMFS142E03- ATCGAAGCTCAAAGCTCAGTTCCCAAGCCCGAATGAGTATTCATCTTTCATGGGCGATTT
                      ____________________________________________________________
consensus ATCGAAGCTCAAAGCTCAGTTCCCAAGCCCGAATGAGTATTCATCTTTCATGGGCGATTT
 
. : . : . : . : . : . :
JMFS142E03- CTCAACTGCCACCGGAATTGCAACTTTTACAATGATGTTGCTAAGCCAATGGGTGTTTGA
rJMSF047H21+ GGTGTTTGA
rJMSF021F03+ GGTGTTTGA
rJMSF019F10+ GGTGTTTGA
                      ____________________________________________________________
consensus CTCAACTGCCACCGGAATTGCAACTTTTACAATGATGTTGCTAAGCCAATGGGTGTTTGA
 
. : . : . : . : . : . :
JMFS142E03- CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF047H21+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF021F03+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF015F20+ GGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF019F10+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
                      ____________________________________________________________
consensus CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
 
. : . : . : . : . : . :
JMFS142E03- TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF047H21+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF021F03+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
JMFS050H01- ATTTGGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF015F20+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMFF036C11+ TACTCTTGCAACGTTCGG
rJMSF019F10+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
                      ____________________________________________________________
consensus TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
 
. : . : . : . : . : . :
JMFS142E03- GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF047H21+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF021F03+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
JMFS050H01- GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF015F20+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMFF036C11+ GATGACTCNTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF019F10+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
                      ____________________________________________________________
consensus GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
 
. : . : . : . : . : . :
JMFS142E03- TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF047H21+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF021F03+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
JMFS050H01- TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF015F20+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMFF036C11+ TCCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF019F10+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
                      ____________________________________________________________
consensus TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
 
. : . : . : . : . : . :
JMFS142E03- CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF047H21+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF021F03+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
JMFS050H01- CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF015F20+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMFF036C11+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF019F10+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
                      ____________________________________________________________
consensus CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
 
. : . : . : . : . : . :
JMFS142E03- TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF047H21+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF021F03+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
JMFS050H01- TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF015F20+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMFF036C11+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF019F10+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
                      ____________________________________________________________
consensus TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
 
. : . : . : . : . : . :
JMFS142E03- TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF047H21+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF021F03+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
JMFS050H01- TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGATGTCAGCGGCTAAGTCTTT
rJMSF015F20+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMFF036C11+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF019F10+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
                      ____________________________________________________________
consensus TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
 
. : . : . : . : . : . :
JMFS142E03- GGATGTTCAGTTCACTGCTTTGCGACGA
rJMSF047H21+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF021F03+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
JMFS050H01- GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF015F20+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMFF036C11+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF019F10+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
                      ____________________________________________________________
consensus GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
 
. : . : . : . : . : . :
rJMSF047H21+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMSF021F03+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
JMFS050H01- AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAACGTCATCANTGAA
rJMSF015F20+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMFF036C11+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMSF019F10+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
                      ____________________________________________________________
consensus AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
 
. : . : . : . : . : . :
rJMSF047H21+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMSF021F03+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCTGGAA
JMFS050H01- CCCCATCGAAGGCGG
rJMSF015F20+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMFF036C11+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMSF019F10+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
                      ____________________________________________________________
consensus CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
 
. : . : . : . : . : . :
rJMSF047H21+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF021F03+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF015F20+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMFF036C11+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF019F10+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
                      ____________________________________________________________
consensus CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
 
. : . : . : . : . : . :
rJMSF047H21+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF021F03+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF015F20+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMFF036C11+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF019F10+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
                      ____________________________________________________________
consensus GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
 
. : . : . : . : . : . :
rJMSF047H21+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMSF021F03+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATC
rJMSF015F20+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMFF036C11+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMSF019F10+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGATAAATTT
                      ____________________________________________________________
consensus GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGATAAATTT