clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF036C11 | Sequence | 470 | 010902 (6) | ref|XP_009758418.1| | 2e-33 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 679 | 004252 (7) | gb|ABO87603.1| | 4e-67 | chloroplast ATP/ADP translocator [Pisum sativum] |
JMFS050H01 | Sequence | 512 | 004252 (7) | gb|ABO87603.1| | 5e-72 | chloroplast ATP/ADP translocator [Pisum sativum] | |||||
JMFS142E03 | Sequence | 597 | 004252 (7) | gb|ABO87603.1| | 4e-129 | chloroplast ATP/ADP translocator [Pisum sativum] | |||||
JMSF015F20 | Sequence | 224 | 010902 (6) | 782 | 004252 (7) | gb|ABO87603.1| | 6e-89 | chloroplast ATP/ADP translocator [Pisum sativum] | |||
JMSF019F10 | Sequence | 227 | 010902 (6) | 822 | 004252 (7) | gb|ABO87603.1| | 9e-101 | chloroplast ATP/ADP translocator [Pisum sativum] | |||
JMSF021F03 | Sequence | 609 | 010902 (6) | ref|XP_009758418.1| | 5e-63 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 805 | 004252 (7) | gb|ABO87603.1| | 2e-100 | chloroplast ATP/ADP translocator [Pisum sativum] |
JMSF047H21 | Sequence | 705 | 010902 (6) | ref|XP_009758418.1| | 2e-84 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 810 | 004252 (7) | gb|ABO87603.1| | 4e-95 | chloroplast ATP/ADP translocator [Pisum sativum] |
This contig is upended
. : . : . : . : . : . :
JMFS142E03- AGCATCAACCTTGTTGAGGTTACATGGAA
____________________________________________________________
consensus AGCATCAACCTTGTTGAGGTTACATGGAA
. : . : . : . : . : . :
JMFS142E03- ATCGAAGCTCAAAGCTCAGTTCCCAAGCCCGAATGAGTATTCATCTTTCATGGGCGATTT
____________________________________________________________
consensus ATCGAAGCTCAAAGCTCAGTTCCCAAGCCCGAATGAGTATTCATCTTTCATGGGCGATTT
. : . : . : . : . : . :
JMFS142E03- CTCAACTGCCACCGGAATTGCAACTTTTACAATGATGTTGCTAAGCCAATGGGTGTTTGA
rJMSF047H21+ GGTGTTTGA
rJMSF021F03+ GGTGTTTGA
rJMSF019F10+ GGTGTTTGA
____________________________________________________________
consensus CTCAACTGCCACCGGAATTGCAACTTTTACAATGATGTTGCTAAGCCAATGGGTGTTTGA
. : . : . : . : . : . :
JMFS142E03- CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF047H21+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF021F03+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF015F20+ GGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
rJMSF019F10+ CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
____________________________________________________________
consensus CAAGTATGGTTGGGGAGTAGCAGCAAAGATAACGCCAACCGTCTTGCTCCTTACTGGAGT
. : . : . : . : . : . :
JMFS142E03- TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF047H21+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF021F03+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
JMFS050H01- ATTTGGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMSF015F20+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
rJMFF036C11+ TACTCTTGCAACGTTCGG
rJMSF019F10+ TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
____________________________________________________________
consensus TGGCTTCTTTTCCCTTATTTTGTTCGGTGCCCCCCTCGCACCTACTCTTGCAACGTTCGG
. : . : . : . : . : . :
JMFS142E03- GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF047H21+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF021F03+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
JMFS050H01- GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF015F20+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMFF036C11+ GATGACTCNTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
rJMSF019F10+ GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
____________________________________________________________
consensus GATGACTCCTCTTCTAGCGGCAGTTTATGTGGGCGCGATGCAGAACATTTTCAGTAAGAG
. : . : . : . : . : . :
JMFS142E03- TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF047H21+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF021F03+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
JMFS050H01- TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF015F20+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMFF036C11+ TCCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
rJMSF019F10+ TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
____________________________________________________________
consensus TGCAAAATACAGCTTATTTGATCCATGCAAGGAAATGGCATACATTCCCTTAGATGAGGA
. : . : . : . : . : . :
JMFS142E03- CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF047H21+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF021F03+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
JMFS050H01- CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF015F20+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMFF036C11+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
rJMSF019F10+ CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
____________________________________________________________
consensus CACCAAGGTGAAAGGCAAAGCCGCGATTGATGTAGTTTGCAATCCATTGGGGAAGTCCGG
. : . : . : . : . : . :
JMFS142E03- TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF047H21+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF021F03+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
JMFS050H01- TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF015F20+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMFF036C11+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
rJMSF019F10+ TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
____________________________________________________________
consensus TGGAGCTTTGATACAGCAATTCATGATATTAACATTTGGTTCGCTTGCCAACTCGACTCC
. : . : . : . : . : . :
JMFS142E03- TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF047H21+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF021F03+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
JMFS050H01- TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGATGTCAGCGGCTAAGTCTTT
rJMSF015F20+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMFF036C11+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
rJMSF019F10+ TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
____________________________________________________________
consensus TTACCTCGGAGGCGTTCTCTTGGTTATCGTTCTCGCATGGTTGTCAGCGGCTAAGTCTTT
. : . : . : . : . : . :
JMFS142E03- GGATGTTCAGTTCACTGCTTTGCGACGA
rJMSF047H21+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF021F03+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
JMFS050H01- GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF015F20+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMFF036C11+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
rJMSF019F10+ GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
____________________________________________________________
consensus GGATGTTCAGTTCACTGCTTTGCGACGAGAAGAAGAGCTCGAGAAGGAGATGGAGAGGGC
. : . : . : . : . : . :
rJMSF047H21+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMSF021F03+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
JMFS050H01- AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAACGTCATCANTGAA
rJMSF015F20+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMFF036C11+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
rJMSF019F10+ AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
____________________________________________________________
consensus AGCCGCCCTGAAAATCCCCGTCGTGTCTGAAGGTGGAAATGGTTCAGCGTCATCAGTGAA
. : . : . : . : . : . :
rJMSF047H21+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMSF021F03+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCTGGAA
JMFS050H01- CCCCATCGAAGGCGG
rJMSF015F20+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMFF036C11+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
rJMSF019F10+ CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
____________________________________________________________
consensus CCCCATCGAAGGCGGCATCGAAGGCGGCGCTTCTGCTGAACCCTACCCCCGCCCCCGGAA
. : . : . : . : . : . :
rJMSF047H21+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF021F03+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF015F20+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMFF036C11+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
rJMSF019F10+ CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
____________________________________________________________
consensus CGTGTGATGATGATTGATACCGATACCCCTTAGGCTCTTACATATCTTCCCGAATAATCG
. : . : . : . : . : . :
rJMSF047H21+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF021F03+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF015F20+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMFF036C11+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
rJMSF019F10+ GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
____________________________________________________________
consensus GAAGTTGTTAGGTGCAACAATTTGGAGAAGTTATTGAATGTTGTTTTGTCATAGGAATTT
. : . : . : . : . : . :
rJMSF047H21+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMSF021F03+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATC
rJMSF015F20+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMFF036C11+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGAT
rJMSF019F10+ GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGATAAATTT
____________________________________________________________
consensus GTTATTATGATCAGTAGAAATAATCTGTAGTATAAAATCAGGCTTTGCACTGATAAATTT