Contig 004251:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019D14Sequence380009246 (7)735004251 (4)ref|XP_011097171.1|1e-23PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF036O08Sequence656009246 (7)ref|XP_009785605.1|2e-52PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]673004251 (4)ref|XP_011097171.1|3e-24PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF041A13Sequence693009246 (7)ref|XP_009785605.1|2e-61PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]558004251 (4)ref|XP_011097171.1|8e-19PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF050J10Sequence641009246 (7)ref|XP_009785605.1|3e-47PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]727004251 (4)ref|XP_011097171.1|2e-25PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036O08+ ACTCAGTCGTGCATC
rJMSF050J10+ TTTTGTGTTACTCAGTCGTGCATC
rJMSF019D14+ ACTCAGTCGTGCATC
                      ____________________________________________________________
consensus TTTTGTGTTACTCAGTCGTGCATC
 
. : . : . : . : . : . :
rJMSF036O08+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
rJMSF050J10+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
rJMSF019D14+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
                      ____________________________________________________________
consensus AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
 
. : . : . : . : . : . :
rJMSF036O08+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF050J10+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF041A13+ CCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF019D14+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
                      ____________________________________________________________
consensus TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
 
. : . : . : . : . : . :
rJMSF036O08+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF050J10+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF041A13+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF019D14+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
                      ____________________________________________________________
consensus GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
 
. : . : . : . : . : . :
rJMSF036O08+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF050J10+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF041A13+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF019D14+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
                      ____________________________________________________________
consensus ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
 
. : . : . : . : . : . :
rJMSF036O08+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF050J10+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF041A13+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF019D14+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
                      ____________________________________________________________
consensus GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
 
. : . : . : . : . : . :
rJMSF036O08+ GCTCAATTTTTAGTATATGCACTTGGGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF050J10+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF041A13+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF019D14+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
                      ____________________________________________________________
consensus GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
 
. : . : . : . : . : . :
rJMSF036O08+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF050J10+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF041A13+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF019D14+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
                      ____________________________________________________________
consensus TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
 
. : . : . : . : . : . :
rJMSF036O08+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF050J10+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF041A13+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF019D14+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
                      ____________________________________________________________
consensus GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
 
. : . : . : . : . : . :
rJMSF036O08+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF050J10+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF041A13+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF019D14+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
                      ____________________________________________________________
consensus CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
 
. : . : . : . : . : . :
rJMSF036O08+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF050J10+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF041A13+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF019D14+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
                      ____________________________________________________________
consensus ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
 
. : . : . : . : . : . :
rJMSF036O08+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATG
rJMSF050J10+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
rJMSF041A13+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATG
rJMSF019D14+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
                      ____________________________________________________________
consensus CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
 
. : . : . : . : . : . :
rJMSF050J10+ CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTA
rJMSF019D14+ CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTACTTTCTATTCTGAAAAT
                      ____________________________________________________________
consensus CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTACTTTCTATTCTGAAAAT