| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF019D14 | Sequence | 380 | 009246 (7) | 735 | 004251 (4) | ref|XP_011097171.1| | 1e-23 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] | |||
| JMSF036O08 | Sequence | 656 | 009246 (7) | ref|XP_009785605.1| | 2e-52 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 673 | 004251 (4) | ref|XP_011097171.1| | 3e-24 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
| JMSF041A13 | Sequence | 693 | 009246 (7) | ref|XP_009785605.1| | 2e-61 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 558 | 004251 (4) | ref|XP_011097171.1| | 8e-19 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
| JMSF050J10 | Sequence | 641 | 009246 (7) | ref|XP_009785605.1| | 3e-47 | PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris] | 727 | 004251 (4) | ref|XP_011097171.1| | 2e-25 | PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF036O08+ ACTCAGTCGTGCATC
rJMSF050J10+ TTTTGTGTTACTCAGTCGTGCATC
rJMSF019D14+ ACTCAGTCGTGCATC
____________________________________________________________
consensus TTTTGTGTTACTCAGTCGTGCATC
. : . : . : . : . : . :
rJMSF036O08+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
rJMSF050J10+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
rJMSF019D14+ AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
____________________________________________________________
consensus AAACCTTCATCTTGTCGAGGGGAAACTGTATCTTCTGCTTCTTGGTACAACAGCTCTTAG
. : . : . : . : . : . :
rJMSF036O08+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF050J10+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF041A13+ CCTGCTGTGGTGCACCTTGGGGTGCT
rJMSF019D14+ TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
____________________________________________________________
consensus TCTGGTGACTACTCCATTGCTTTTTAAGCTAATACCTGCTGTGGTGCACCTTGGGGTGCT
. : . : . : . : . : . :
rJMSF036O08+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF050J10+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF041A13+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
rJMSF019D14+ GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
____________________________________________________________
consensus GCTTAGGTGGTTTTCACCTGACAGCCAAACTGAGTTGGGGTTAAAAGGAGAAACCCTCCG
. : . : . : . : . : . :
rJMSF036O08+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF050J10+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF041A13+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
rJMSF019D14+ ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
____________________________________________________________
consensus ATCAGAGAGTGTTAAGCAAAGGATTGCCTTGATATCCAAGGATCTCTTGATTCACGAGGG
. : . : . : . : . : . :
rJMSF036O08+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF050J10+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF041A13+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
rJMSF019D14+ GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
____________________________________________________________
consensus GTAAACTAGTGAAGCTAGATGCCACATATGCCCGGGGACAACAAAAAGGCTACATTCCCA
. : . : . : . : . : . :
rJMSF036O08+ GCTCAATTTTTAGTATATGCACTTGGGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF050J10+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF041A13+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
rJMSF019D14+ GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
____________________________________________________________
consensus GCTCAATTTTTAGTATATGCACTTGAGATTCCTGCTCAATTCAACCAAGCTTGCTTTACG
. : . : . : . : . : . :
rJMSF036O08+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF050J10+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF041A13+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
rJMSF019D14+ TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
____________________________________________________________
consensus TTGTGCTATATACTTCAGCTTAGACTTAGAGAGAAGGGAGTGGCAACAACCTCTGAAAAT
. : . : . : . : . : . :
rJMSF036O08+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF050J10+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF041A13+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
rJMSF019D14+ GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
____________________________________________________________
consensus GGGAAACCACAATTGGAGGTTTTCTAACTCTGACAGAACCACTAACAAGATGAAGGCATT
. : . : . : . : . : . :
rJMSF036O08+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF050J10+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF041A13+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
rJMSF019D14+ CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
____________________________________________________________
consensus CGCATTCGCATTTAACCAAGGTAATTTTGATTTTTCTTTTTCCTCTTGTCATTCTTTTTC
. : . : . : . : . : . :
rJMSF036O08+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF050J10+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF041A13+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
rJMSF019D14+ ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
____________________________________________________________
consensus ATTTTTTGCTAGTGTAAAATAGTTTTTGGTTTGTGATGTGTAGTGAATTTTGTGCAACCG
. : . : . : . : . : . :
rJMSF036O08+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATG
rJMSF050J10+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
rJMSF041A13+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATG
rJMSF019D14+ CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
____________________________________________________________
consensus CATTTGGTTATGTATGTTTGTTCTGTAGATTCTAGAATGTAACAAAAAACATTTTCTAGC
. : . : . : . : . : . :
rJMSF050J10+ CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTA
rJMSF019D14+ CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTACTTTCTATTCTGAAAAT
____________________________________________________________
consensus CTGTTATTCGATGTCAATTGTATAGAAGTGCCATCTCTCAGTACTTTCTATTCTGAAAAT