Contig 004249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001J21Sequence320005133 (9)758004249 (4)ref|XP_009618515.1|2e-122PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi
JMSF004F14Sequence447005133 (9)ref|XP_009618505.1|3e-05PREDICTED: uncharacterized protein LOC104110671 isoform X1 [Nicotiana tomentosi101004249 (4)ref|XP_009765845.1|3e-08PREDICTED: uncharacterized protein LOC104217330 isoform X1 [Nicotiana sylvestri
JMSF018O08Sequence505005133 (9)ref|XP_009629701.1|104PREDICTED: uncharacterized protein LOC104119814 [Nicotiana tomentosiformis]743004249 (4)ref|XP_009618515.1|2e-109PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi
JMSF028G21Sequence641005133 (9)ref|XP_004238179.1|174PREDICTED: uncharacterized protein LOC101261408 [Solanum lycopersicum]732004249 (4)ref|XP_009618515.1|8e-103PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001J21+ ATCATACTTATACGAATGGTA
                      ____________________________________________________________
consensus ATCATACTTATACGAATGGTA
 
. : . : . : . : . : . :
rJMSF001J21+ TCGCTATGNTGAGAACGAGCATTTTCCGGACCCCACTGGTCTTAGGGCACGTATAGAACG
rJMSF028G21+ TTAGGGCACGTATAGAACG
rJMSF018O08+ TTAGGGCACGTATAGAACG
                      ____________________________________________________________
consensus TCGCTATGNTGAGAACGAGCATTTTCCGGACCCCACTGGTCTTAGGGCACGTATAGAACG
 
. : . : . : . : . : . :
rJMSF001J21+ AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
rJMSF028G21+ ATGGGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
rJMSF018O08+ AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCCTTTGATGTAC
                      ____________________________________________________________
consensus AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
 
. : . : . : . : . : . :
rJMSF001J21+ CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
rJMSF028G21+ CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
rJMSF018O08+ CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
                      ____________________________________________________________
consensus CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
 
. : . : . : . : . : . :
rJMSF001J21+ GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
rJMSF028G21+ GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
rJMSF018O08+ GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
                      ____________________________________________________________
consensus GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
 
. : . : . : . : . : . :
rJMSF001J21+ CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
rJMSF028G21+ CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
rJMSF018O08+ CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
                      ____________________________________________________________
consensus CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
 
. : . : . : . : . : . :
rJMSF001J21+ ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
rJMSF028G21+ ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
rJMSF018O08+ ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
                      ____________________________________________________________
consensus ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
 
. : . : . : . : . : . :
rJMSF001J21+ ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
rJMSF028G21+ ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
rJMSF004F14+ CCTTGAAGTTTTCACNCTNGCAGTTGATAAGGTTCCGAAAG
rJMSF018O08+ ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
                      ____________________________________________________________
consensus ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
 
. : . : . : . : . : . :
rJMSF001J21+ AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF028G21+ AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF004F14+ AGTGGAAGCNAGACTCAAACTGGGAANCGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF018O08+ AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
                      ____________________________________________________________
consensus AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
 
. : . : . : . : . : . :
rJMSF001J21+ TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
rJMSF028G21+ TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
rJMSF018O08+ TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
                      ____________________________________________________________
consensus TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
 
. : . : . : . : . : . :
rJMSF001J21+ TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
rJMSF028G21+ TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
rJMSF018O08+ TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
                      ____________________________________________________________
consensus TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
 
. : . : . : . : . : . :
rJMSF001J21+ AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
rJMSF028G21+ AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
rJMSF018O08+ AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
                      ____________________________________________________________
consensus AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
 
. : . : . : . : . : . :
rJMSF001J21+ CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
rJMSF028G21+ CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
rJMSF018O08+ CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
                      ____________________________________________________________
consensus CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
 
. : . : . : . : . : . :
rJMSF001J21+ GTAGATCACTCATGTTAT
rJMSF028G21+ GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAG
rJMSF018O08+ GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAGGAAGAAATA
                      ____________________________________________________________
consensus GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAGGAAGAAATA