Contig 004249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001J21Sequence320005133 (9)758004249 (4)ref|XP_009618515.1|2e-122PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi
JMSF004F14Sequence447005133 (9)ref|XP_009618505.1|3e-05PREDICTED: uncharacterized protein LOC104110671 isoform X1 [Nicotiana tomentosi101004249 (4)ref|XP_009765845.1|3e-08PREDICTED: uncharacterized protein LOC104217330 isoform X1 [Nicotiana sylvestri
JMSF018O08Sequence505005133 (9)ref|XP_009629701.1|104PREDICTED: uncharacterized protein LOC104119814 [Nicotiana tomentosiformis]743004249 (4)ref|XP_009618515.1|2e-109PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi
JMSF028G21Sequence641005133 (9)ref|XP_004238179.1|174PREDICTED: uncharacterized protein LOC101261408 [Solanum lycopersicum]732004249 (4)ref|XP_009618515.1|8e-103PREDICTED: uncharacterized protein LOC104110671 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF001J21+                                                 ATCATACTTATACGAATGGTA
                      ____________________________________________________________
consensus                                                    ATCATACTTATACGAATGGTA
 
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rJMSF001J21+          TCGCTATGNTGAGAACGAGCATTTTCCGGACCCCACTGGTCTTAGGGCACGTATAGAACG
rJMSF028G21+                                                   TTAGGGCACGTATAGAACG
rJMSF018O08+                                                   TTAGGGCACGTATAGAACG
                      ____________________________________________________________
consensus             TCGCTATGNTGAGAACGAGCATTTTCCGGACCCCACTGGTCTTAGGGCACGTATAGAACG
 
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rJMSF001J21+          AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
rJMSF028G21+          ATGGGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
rJMSF018O08+          AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCCTTTGATGTAC
                      ____________________________________________________________
consensus             AT-GGACATTTGGCCTTTATCCAGCATGTATCAAGTATCTAATGTCTGCTTTTGATGTAC
 
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rJMSF001J21+          CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
rJMSF028G21+          CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
rJMSF018O08+          CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
                      ____________________________________________________________
consensus             CCGAGGTAATGGCAGTGACGAGGCAAAACATCTGCAAGAATGGGATGGATTCACTCTCCC
 
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rJMSF001J21+          GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
rJMSF028G21+          GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
rJMSF018O08+          GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
                      ____________________________________________________________
consensus             GAGGGGGTGCTGTGATATATTATACATCCGTTTTTCTTTATTTCTGGGTTTTCTCAACTC
 
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rJMSF001J21+          CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
rJMSF028G21+          CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
rJMSF018O08+          CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
                      ____________________________________________________________
consensus             CGGTGGTATCTCTGGTCTTCGGAAGTTATCTGTATATCTGTATTAATTGGCTCCACGTAC
 
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rJMSF001J21+          ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
rJMSF028G21+          ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
rJMSF018O08+          ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
                      ____________________________________________________________
consensus             ATTTTGATGAAGCCTTTTCTTCTCTCCGTATTGCCAACTACAAGTCATTTACACGATTCC
 
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rJMSF001J21+          ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
rJMSF028G21+          ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
rJMSF004F14+                             CCTTGAAGTTTTCACNCTNGCAGTTGATAAGGTTCCGAAAG
rJMSF018O08+          ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
                      ____________________________________________________________
consensus             ACATAAACACCAAAGGCGACCTTGAAGTTTTCACACTTGCAGTTGATAAGGTTCCGAAAG
 
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rJMSF001J21+          AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF028G21+          AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF004F14+          AGTGGAAGCNAGACTCAAACTGGGAANCGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
rJMSF018O08+          AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
                      ____________________________________________________________
consensus             AGTGGAAGCTAGACTCAAACTGGGAAACGGAGCCACAGCAGCCTAGCTATGTGCGGAAAT
 
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rJMSF001J21+          TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
rJMSF028G21+          TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
rJMSF018O08+          TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
                      ____________________________________________________________
consensus             TCCCTAGCAAATGGAGAGCGACGTCACTCCAACAAGATCCTATAAACACTGTTCGGGTTG
 
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rJMSF001J21+          TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
rJMSF028G21+          TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
rJMSF018O08+          TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
                      ____________________________________________________________
consensus             TTGATCATTTCGTCATTGAGCAAACAGAAAAATCTGATTCAGAATCGATGAACGGGTCAA
 
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rJMSF001J21+          AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
rJMSF028G21+          AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
rJMSF018O08+          AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
                      ____________________________________________________________
consensus             AAACTCAATGACAGGTTCAGTTACTAACTAGTCCGTGTTTGTTTTGTACAAATGTTTTAG
 
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rJMSF001J21+          CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
rJMSF028G21+          CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
rJMSF018O08+          CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
                      ____________________________________________________________
consensus             CCGATTCTCTAGATGGCAATCGAAATCGTTAGCAGGATGAATTGAATCTTAGGATCCAGT
 
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rJMSF001J21+          GTAGATCACTCATGTTAT                                          
rJMSF028G21+          GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAG         
rJMSF018O08+          GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAGGAAGAAATA
                      ____________________________________________________________
consensus             GTAGATCACTCATGTTATGTACTGAACCACAGAAGTTGTGTATGATGAGAGGAAGAAATA