Contig 004244:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017K16Sequence510004244 (2)gb|KDP35911.1|2e-39hypothetical protein JCGZ_09883 [Jatropha curcas]718004244 (2)ref|XP_010322648.1|1e-108PREDICTED: LOW QUALITY PROTEIN: ABC transporter I family member 17-like [Solanu

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF017K16- GAGATTGATGGAAAGCTGAGCCAAATCTCGAATAATGCCT
                      ____________________________________________________________
consensus GAGATTGATGGAAAGCTGAGCCAAATCTCGAATAATGCCT
 
. : . : . : . : . : . :
JMSF017K16- CTGCTGGAAAACTGTTCATCTGGGGAAGGCGCCTTCTTCCTCCATAACAACTGCCCACCA
                      ____________________________________________________________
consensus CTGCTGGAAAACTGTTCATCTGGGGAAGGCGCCTTCTTCCTCCATAACAACTGCCCACCA
 
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JMSF017K16- CCACGCCTTGTTCTCCCTCGCGTGGCTCAACTCATCATTCCATGGAGAATTTCCAAGGCA
                      ____________________________________________________________
consensus CCACGCCTTGTTCTCCCTCGCGTGGCTCAACTCATCATTCCATGGAGAATTTCCAAGGCA
 
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JMSF017K16- GTTTAACGGAGCATCTGGTTGTGGTGGATGGTGGTAGCGAAATCAAAATCCGGGTTAGTG
                      ____________________________________________________________
consensus GTTTAACGGAGCATCTGGTTGTGGTGGATGGTGGTAGCGAAATCAAAATCCGGGTTAGTG
 
. : . : . : . : . : . :
JMSF017K16- GGCTCACGAAGGATTCAAACAATGGCGTCACCGTACTCAACAAGGTCAGCCTGGATATAC
                      ____________________________________________________________
consensus GGCTCACGAAGGATTCAAACAATGGCGTCACCGTACTCAACAAGGTCAGCCTGGATATAC
 
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JMSF017K16- CCAGAGGTGTAATCGTGGGGATTATTGGGCCGAGTGGTAGCGGAAAATCAACTTTCTTGA
                      ____________________________________________________________
consensus CCAGAGGTGTAATCGTGGGGATTATTGGGCCGAGTGGTAGCGGAAAATCAACTTTCTTGA
 
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JMSF017K16- GAGCTCTCAACCGCCTATGGGAGCCTCCTTCTGGCACAATCTTCTTGGATGGTAAAGATA
rJMSF017K16+ GCTCTCAACCGCCTATGGGAGCCTCCTTCTGGCACAATCTTCTTGGATGGTAAAGATA
                      ____________________________________________________________
consensus GAGCTCTCAACCGCCTATGGGAGCCTCCTTCTGGCACAATCTTCTTGGATGGTAAAGATA
 
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JMSF017K16- TATGTGAGTTGGATGTGCTGAGCCTTCGCCGCCATGTTGGGATGTTGTTTCAGCTCCCTG
rJMSF017K16+ TATGTGAGTTGGATGTGCTGAGCCTTCGCCGCCATGTTGGGATGTTGTTTCAGCTCCCTG
                      ____________________________________________________________
consensus TATGTGAGTTGGATGTGCTGAGCCTTCGCCGCCATGTTGGGATGTTGTTTCAGCTCCCTG
 
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JMSF017K16- CTCTTTTTCANGGCAGTGTTGCAGATAACATCAGATATGGACCACAGTTA
rJMSF017K16+ CTCTTTTTCAAGGCAGTGTTGCAGATAACATCAGATATGGACCACAGTTAAGAGGGAAAA
                      ____________________________________________________________
consensus CTCTTTTTCAAGGCAGTGTTGCAGATAACATCAGATATGGACCACAGTTAAGAGGGAAAA
 
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rJMSF017K16+ AACTTGGTGACAATCATGTCCACAAATTGCTTACCCTTGCTGATCTCGACTCCTCTTTCT
                      ____________________________________________________________
consensus AACTTGGTGACAATCATGTCCACAAATTGCTTACCCTTGCTGATCTCGACTCCTCTTTCT
 
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rJMSF017K16+ TCAACAAATGTGCTGCTGAGTTATCTGTTGGTCAGGCTCAAAGGGTTGCACTTGCTAGGA
                      ____________________________________________________________
consensus TCAACAAATGTGCTGCTGAGTTATCTGTTGGTCAGGCTCAAAGGGTTGCACTTGCTAGGA
 
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rJMSF017K16+ CCTTGGCTAATGAACCACAGGTTCTGTTACTAGATGAGCCAACCAGTGCACTGGATCCCA
                      ____________________________________________________________
consensus CCTTGGCTAATGAACCACAGGTTCTGTTACTAGATGAGCCAACCAGTGCACTGGATCCCA
 
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rJMSF017K16+ TATCAACACAGAATATCGAGGATGTGCTTGTAAAGCTGAAGAAAGATCACAACATGACAA
                      ____________________________________________________________
consensus TATCAACACAGAATATCGAGGATGTGCTTGTAAAGCTGAAGAAAGATCACAACATGACAA
 
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rJMSF017K16+ TTGCAATCGTCTCTCACAGTATCAAACAAATACAGAGAATTGCTGATATGGTTTGCCTTC
                      ____________________________________________________________
consensus TTGCAATCGTCTCTCACAGTATCAAACAAATACAGAGAATTGCTGATATGGTTTGCCTTC
 
. : . : . : . : . : . :
rJMSF017K16+ TTGTTGGCGGTGAAATCGTTGAAATTCTAAAACCCGATCAACTCTCTGAAGCTAAGCATC
                      ____________________________________________________________
consensus TTGTTGGCGGTGAAATCGTTGAAATTCTAAAACCCGATCAACTCTCTGAAGCTAAGCATC
 
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rJMSF017K16+ CCATGGCACAAAGGTTTCTCCAACTTAGCTCCTAGTTTGTGTTACTGTTATCAGCTCACT
                      ____________________________________________________________
consensus CCATGGCACAAAGGTTTCTCCAACTTAGCTCCTAGTTTGTGTTACTGTTATCAGCTCACT
 
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rJMSF017K16+ ATTTTATGCCCGGGTTTGATAGAATGATAGGTACGAGTTTGCCATGTGACTATAAGTGGA
                      ____________________________________________________________
consensus ATTTTATGCCCGGGTTTGATAGAATGATAGGTACGAGTTTGCCATGTGACTATAAGTGGA
 
. : . : . : . : . : . :
rJMSF017K16+ ACTATTTCTGGTCTCACATTAGTTGAGAGTAGAGAATATCTCATCTTTCAAATGCTGTTG
                      ____________________________________________________________
consensus ACTATTTCTGGTCTCACATTAGTTGAGAGTAGAGAATATCTCATCTTTCAAATGCTGTTG