Contig 004240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017E18Sequence491002288 (2)ref|XP_009774451.1|5e-75PREDICTED: folylpolyglutamate synthase isoform X1 [Nicotiana sylvestris]783004240 (2)ref|XP_009774453.1|7e-57PREDICTED: folylpolyglutamate synthase isoform X3 [Nicotiana sylvestris]
JMSF028H05Sequence597002288 (2)ref|XP_009774451.1|2e-88PREDICTED: folylpolyglutamate synthase isoform X1 [Nicotiana sylvestris]713004240 (2)ref|XP_009614773.1|8e-68PREDICTED: folylpolyglutamate synthase {ECO:0000250|UniProtKB:Q05932, ECO:00003

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017E18+ ATCAAAG
                      ____________________________________________________________
consensus ATCAAAG
 
. : . : . : . : . : . :
rJMSF017E18+ ACGACTACCCGCAGCACAATTCTATTAAAAATCGGGCGCTTGAGACGGGAGCTTCTTGTG
                      ____________________________________________________________
consensus ACGACTACCCGCAGCACAATTCTATTAAAAATCGGGCGCTTGAGACGGGAGCTTCTTGTG
 
. : . : . : . : . : . :
rJMSF028H05+ CCCAGACAGAGCATTACCAGAAGACGAAGAAAAGTTCTACACAAATTCTGTTGT
rJMSF017E18+ GACCGCCCCAGACAGAGCATTACCAGAAGACGAAGAAAAGTTCTACACAAATTCTGTTGT
                      ____________________________________________________________
consensus GACCGCCCCAGACAGAGCATTACCAGAAGACGAAGAAAAGTTCTACACAAATTCTGTTGT
 
. : . : . : . : . : . :
rJMSF028H05+ TCAACTGCATGTCGGTGAGGGATCCTCAACTGCTCCTTCCGCGCTTGATGAGTGCTTGTG
rJMSF017E18+ TCAACTGCATGTCGGTGAGGGATCCTCAACTGCTCCTTCCGCGCTTGATGAGTGCTTGTG
                      ____________________________________________________________
consensus TCAACTGCATGTCGGTGAGGGATCCTCAACTGCTCCTTCCGCGCTTGATGAGTGCTTGTG
 
. : . : . : . : . : . :
rJMSF028H05+ AAATGCACGGAATCTACTTTAAGAAGGCATTGTTTGTTCCTAACATATCAGTGTATAATA
rJMSF017E18+ AAATGCACGGAATCTACTTTAAGAAGGCATTGTTTGTTCCTAACATATCAGTGTATAATA
                      ____________________________________________________________
consensus AAATGCACGGAATCTACTTTAAGAAGGCATTGTTTGTTCCTAACATATCAGTGTATAATA
 
. : . : . : . : . : . :
rJMSF028H05+ AGGTGGGTACCGGTTCTACGATTCCAGCTGATAATCAAGTAGATATCTCGTGGCAGTTGA
rJMSF017E18+ AGGTGGGTACCGGTTCTACGATTCCAGCTGATAATCAAGTAGATATCTCGTGGCAGTTGA
                      ____________________________________________________________
consensus AGGTGGGTACCGGTTCTACGATTCCAGCTGATAATCAAGTAGATATCTCGTGGCAGTTGA
 
. : . : . : . : . : . :
rJMSF028H05+ CTCTTCAAAGATTCTGGGAAAACCTTGTCCGTGAGAAAGGCAGAGACATGGCGAAGAATG
rJMSF017E18+ CTCTTCAAAGATTCTGGGAAAACCTTGTCCGTGAGAA----AGAGACATGGCGAAGAATG
                      ____________________________________________________________
consensus CTCTTCAAAGATTCTGGGAAAACCTTGTCCGTGAGAAAGGCAGAGACATGGCGAAGAATG
 
. : . : . : . : . : . :
rJMSF028H05+ CAGATCAAATATGTGATGAAGGTCCCGATGATACAGAGAAAGGAACTCGAAGTTGTGAAA
rJMSF017E18+ CAGATCAAATATGTGATGAAGGTCCCGATGATACAGAGAAAGGAACTCGAAGTTGTGAAA
                      ____________________________________________________________
consensus CAGATCAAATATGTGATGAAGGTCCCGATGATACAGAGAAAGGAACTCGAAGTTGTGAAA
 
. : . : . : . : . : . :
rJMSF028H05+ ACAGTACAGTTTTTCCTTCGCTTCCAGTTGCAATTAACTGGCTCAGGGATAACGTTCGAA
rJMSF017E18+ GCAGTACAGTTTTTCCTTCGCTTCCAGTTGCAATTAACTGGCTCAGGGATAACGTTCGAA
                      ____________________________________________________________
consensus GCAGTACAGTTTTTCCTTCGCTTCCAGTTGCAATTAACTGGCTCAGGGATAACGTTCGAA
 
. : . : . : . : . : . :
rJMSF028H05+ AGAATCAGTCCGTTCGCTTCCAGGTCCTAGTAACGGGGTCTTTACACCTCGTGGGTGACG
rJMSF017E18+ AGAATCAGTCCGTTCGCTTCCAGGTCCTAGTAACGGGGTCTTTACACCTCGTGGGTGACG
                      ____________________________________________________________
consensus AGAATCAGTCCGTTCGCTTCCAGGTCCTAGTAACGGGGTCTTTACACCTCGTGGGTGACG
 
. : . : . : . : . : . :
rJMSF028H05+ TTCTGAAACTAGTGAAGAAATGAGGCTCTAAACGCTGTTTGGAGTCCTTTCCATTTGATT
rJMSF017E18+ TTCTGAAACTAGTGAAGAAATGAGGCTCTAAACGCTGTTTGGAGTCCTTTCCATTTGATT
                      ____________________________________________________________
consensus TTCTGAAACTAGTGAAGAAATGAGGCTCTAAACGCTGTTTGGAGTCCTTTCCATTTGATT
 
. : . : . : . : . : . :
rJMSF028H05+ CTTTTCACAAACAGATCATACTACGCAAATACCAAAGGCAAGAATGTATTCCCGTGTTCC
rJMSF017E18+ CTTTTCACAAACAGATCATACTACGCAAATACCAAAGGCAAGAATGTATTCCCGTGTTCC
                      ____________________________________________________________
consensus CTTTTCACAAACAGATCATACTACGCAAATACCAAAGGCAAGAATGTATTCCCGTGTTCC
 
. : . : . : . : . : . :
rJMSF028H05+ ATCCAGGTACATTTCCGTTTTCAAATGTTCATGTGAAGTACTCGTCCCATTTTAGTACTG
rJMSF017E18+ ATCCAGGTACATTTCCGTTTTCAAATGTTCATGTGAAGTACTCGTCCCATTTTAGTACTG
                      ____________________________________________________________
consensus ATCCAGGTACATTTCCGTTTTCAAATGTTCATGTGAAGTACTCGTCCCATTTTAGTACTG
 
. : . : . : . : . : . :
rJMSF028H05+ ACATTTTCACGAGTTATAGAAAATAGAATACTCGTTGGTTTCATATCCATGTACTCTTT
rJMSF017E18+ ACATTTTCACGAGTTATAGAAAATAGAATACTCGTTGGTTTCATATCCATGTACTCTTTA
                      ____________________________________________________________
consensus ACATTTTCACGAGTTATAGAAAATAGAATACTCGTTGGTTTCATATCCATGTACTCTTTA