| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF017C19 | Sequence | 472 | 010746 (3) | ref|XP_011086518.1| | 90.1 | PREDICTED: uncharacterized protein LOC105168224 [Sesamum indicum] | 781 | 004239 (3) | ref|XP_006438456.1| | 3e-31 | hypothetical protein CICLE_v10032202mg [Citrus clementina] gb|ESR51696.1| hypoth |
| JMSF017C21 | Sequence | 257 | 010746 (3) | 760 | 004239 (3) | ref|XP_006438456.1| | 3e-22 | hypothetical protein CICLE_v10032202mg [Citrus clementina] gb|ESR51696.1| hypoth | |||
| JMSF028N12 | Sequence | 670 | 010746 (3) | ref|XP_004238694.1| | 179 | PREDICTED: uncharacterized protein LOC101259841 [Solanum lycopersicum] | 762 | 004239 (3) | ref|XP_006438457.1| | 4e-23 | hypothetical protein CICLE_v10032202mg [Citrus clementina] ref|XP_006438458.1| h |
This contig is upended
. : . : . : . : . : . :
rJMSF017C19+ GGGCATAGGTGGCACCTGTTGAAAGC
____________________________________________________________
consensus GGGCATAGGTGGCACCTGTTGAAAGC
. : . : . : . : . : . :
rJMSF017C19+ NAGCGAGGAACTAATTTCTAAAATGAGTGCCTCGAAAACGGTCTACTTGCACTGTCGAAT
rJMSF028N12+ TTCTAAAATGAGTGCCTCGAAANCGGTCTACTTGCACTGTCGAAT
rJMSF017C21+ AAATGAGTGCCTCGAAAACGGTCTACTTGCACTGTCGAAT
____________________________________________________________
consensus NAGCGAGGAACTAATTTCTAAAATGAGTGCCTCGAAAACGGTCTACTTGCACTGTCGAAT
. : . : . : . : . : . :
rJMSF017C19+ GATCGATGCAGGACCATACAACATGTATACCAAGGCAGGTTATAGCATTGTAAAGACCGA
rJMSF028N12+ GATCGATGCAGGACCATACAACATGTATACCAAGGCAGGTTATAGCATTGTAAAGACCGA
rJMSF017C21+ GATCGATGCAGGACCATACAACATGTATACCAAGGCAGGTTATAGCATTGTAAAGACCGA
____________________________________________________________
consensus GATCGATGCAGGACCATACAACATGTATACCAAGGCAGGTTATAGCATTGTAAAGACCGA
. : . : . : . : . : . :
rJMSF017C19+ TAGTATCTTGGTCCTGCTCACGTTGCAGAGGCGTAAACACTTGATGTGCAAATATCTTCA
rJMSF028N12+ TAGTATCTTGGTCCTGCTCACGTTGCAGAGGCGTAAACACTTGATGTGCAAATATCTTCA
rJMSF017C21+ TAGTATCTTGGTCCTGCTCACGTTGCAGAGGCGTAAACACTTGATGTGCAAATATCTTCA
____________________________________________________________
consensus TAGTATCTTGGTCCTGCTCACGTTGCAGAGGCGTAAACACTTGATGTGCAAATATCTTCA
. : . : . : . : . : . :
rJMSF017C19+ AGACATCGAAAGCCCCTCGGAAGTTGAAACACCCGTAGACCAACTCACACTATGAATCTT
rJMSF028N12+ AGACATCGAAAGCCCCTCGGAAGTTGAAACACCCGTAGACCAACTCACACTATGAATCTT
rJMSF017C21+ AGACATCGAAAGCCCCTCGGAAGTTGAAACACCCGTAGACCAACTCACACTATGAATCTT
____________________________________________________________
consensus AGACATCGAAAGCCCCTCGGAAGTTGAAACACCCGTAGACCAACTCACACTATGAATCTT
. : . : . : . : . : . :
rJMSF017C19+ CATGTGAAAACAGAAACAAGCGATGGGGTGGATGGATTCAAGTCATCAATTTATCGACAT
rJMSF028N12+ CATGTGAAAACAGAAACAAGCGATGGGGTGGATGGATTCAAGTCATCAATTTATCGACAT
rJMSF017C21+ CATGTGAAAACAGAAACAAGCGATGGGGTGGATGGATTCAAGTCATCAATTTATCGACAT
____________________________________________________________
consensus CATGTGAAAACAGAAACAAGCGATGGGGTGGATGGATTCAAGTCATCAATTTATCGACAT
. : . : . : . : . : . :
rJMSF017C19+ TACTCGGGTTTATATATCCCTGAAAGGAAGCATGCAATTTGATTGGTAATACACTAACAC
rJMSF028N12+ TACTCGGGTTTATATATCCCTGAAAGGAAGCATGCAATTTGATTGGTAATACACTAACAC
rJMSF017C21+ TACTCGGGTTTATATATCCCTGAAAGGAAGCATGCAATTTGATTGGTAATACACTAACAC
____________________________________________________________
consensus TACTCGGGTTTATATATCCCTGAAAGGAAGCATGCAATTTGATTGGTAATACACTAACAC
. : . : . : . : . : . :
rJMSF017C19+ TTGCAGAACCTGCATACAATTCTGAAAATCAGAAATATGAATCTGAAACTAGAGATGATA
rJMSF028N12+ TTGCAGAACCTGCATACAATTCTGAAAATCAGAAATATGAATCTGAAACTAGAGATGATA
rJMSF017C21+ TTGCAGAACCTGCATACAATTCTGAAAATCAGAAATATGAATCTGAAACTAGAGATGATA
____________________________________________________________
consensus TTGCAGAACCTGCATACAATTCTGAAAATCAGAAATATGAATCTGAAACTAGAGATGATA
. : . : . : . : . : . :
rJMSF017C19+ GCATTGCGAAATATAAAGGTGAAAGCAAAAAATCGAGAAGCAGAGAAGTATACGAGGATC
rJMSF028N12+ GCATTGCGAAATATAAAGGTGAAAGCAAAAAATCGAGAAGCAGAGAAGTATACGAGGATC
rJMSF017C21+ GCATTGCGAAATATAAAGGTGAAAGCAAAAAATCGAGAAGCAGAGAAGTATACGAGGATC
____________________________________________________________
consensus GCATTGCGAAATATAAAGGTGAAAGCAAAAAATCGAGAAGCAGAGAAGTATACGAGGATC
. : . : . : . : . : . :
rJMSF017C19+ GATCTTGATCCTCAGAGTTGCATCTCTGCTGCTTGTTCCGCACTGTGACTACCAAAATGA
rJMSF028N12+ GATCTTGATCCTCAGAGTTGCATCTCTGCTGCTTGTTCCGCACTGTGACTACCAAAATGA
rJMSF017C21+ GATCTTGATCCTCAGAGTTGCATCTCTGCTGCTTGTTCCGCACTGTGACTACCAAAATGA
____________________________________________________________
consensus GATCTTGATCCTCAGAGTTGCATCTCTGCTGCTTGTTCCGCACTGTGACTACCAAAATGA
. : . : . : . : . : . :
rJMSF017C19+ ACGACGACGACGACTCTCCTTATGAGTACTCCAAATGCCTGTTTTTGAGACCTTTGATCA
rJMSF028N12+ ACGACGACGACGACTCTCCTTATGAGTACTCCAAATGCCTGTTTTTGAGACCTTTGATCA
rJMSF017C21+ ACGACGACGACGACTCTCCTTATGAGTACTCCAAATGCCTGTTTTTGAGACCTTTGATCA
____________________________________________________________
consensus ACGACGACGACGACTCTCCTTATGAGTACTCCAAATGCCTGTTTTTGAGACCTTTGATCA
. : . : . : . : . : . :
rJMSF017C19+ TATTCTGGAACTGAAGTCCTGTTTAGTGAGAGAAGTCGAGTTGAAATAGAATCAGAATTC
rJMSF028N12+ TATTCTGGAACTGAAGTCCTGTTTAGTGAGAGAAGTCGAGTTGAAATAGAATCAGAATTC
rJMSF017C21+ TATTCTGGAACTGAAGTCCTGTTTAGTGAGAGAAGTCGAGTTGAAATAGAATCAGAATTC
____________________________________________________________
consensus TATTCTGGAACTGAAGTCCTGTTTAGTGAGAGAAGTCGAGTTGAAATAGAATCAGAATTC
. : . : . : . : . : . :
rJMSF017C19+ CAAATTTCTGTTAAATCATGATTCCTAAGAAATCTCTATTGTATTTCATGCCATTTTTTT
rJMSF028N12+ CAAATTTCTGTTAAATCATGATTCCTAAGAAATCTCTATTGTATTTCATGCCATTTTTTT
rJMSF017C21+ CAAATTTCTGTTAAATCATGATTCCTAAGAAATCTCTATTGTATTTCATGCCATTTTTTT
____________________________________________________________
consensus CAAATTTCTGTTAAATCATGATTCCTAAGAAATCTCTATTGTATTTCATGCCATTTTTTT
. : . : . : . : . : . :
rJMSF017C19+ TCCCTTTACTAAAAGGT
rJMSF028N12+ TCCCTTTACTAAAAGGT
rJMSF017C21+ TCCCTTTACTAAAAGGTTGGAATTAGAGATTATGATGTGTGTAAGCACTTGAATGATACC
____________________________________________________________
consensus TCCCTTTACTAAAAGGTTGGAATTAGAGATTATGATGTGTGTAAGCACTTGAATGATACC