Contig 004237:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I12Sequence276010549 (2)791004237 (2)gb|KCW80777.1|6e-70hypothetical protein EUGRSUZ_C021581, partial [Eucalyptus grandis]
JMSF016M15Sequence422010549 (2)ref|XP_011078173.1|4e-06PREDICTED: chloroplast envelope membrane protein-like isoform X3 [Sesamum indic795004237 (2)gb|KCW80777.1|3e-75hypothetical protein EUGRSUZ_C021581, partial [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002I12+ TCAGAAAGCGTT
rJMSF016M15+ TCATCAGAAAGCGNT
                      ____________________________________________________________
consensus TCATCAGAAAGCGTT
 
. : . : . : . : . : . :
rJMSF002I12+ AGAAATGCGGGATGAGCGGAGGTTAGAAAATCGCCGAGCATTGCTAATATATGGTCGGAT
rJMSF016M15+ AGNAATGCGGGATGAGCGGAGGTTAGAAATCGCCGAGCATTTGCTAATATATGGTCGGAT
                      ____________________________________________________________
consensus AGAAATGCGGGATGAGCGGAGGTTAGAAATTGGCGGGGCTTTGCTAATATATGGTCGGAT
 
. : . : . : . : . : . :
rJMSF002I12+ GCTGTATTNGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
rJMSF016M15+ GCTGTATTTGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
                      ____________________________________________________________
consensus GCTGTATTTGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
 
. : . : . : . : . : . :
rJMSF002I12+ CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
rJMSF016M15+ CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
                      ____________________________________________________________
consensus CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
 
. : . : . : . : . : . :
rJMSF002I12+ ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
rJMSF016M15+ ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
                      ____________________________________________________________
consensus ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
 
. : . : . : . : . : . :
rJMSF002I12+ TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
rJMSF016M15+ TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
                      ____________________________________________________________
consensus TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
 
. : . : . : . : . : . :
rJMSF002I12+ GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
rJMSF016M15+ GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
                      ____________________________________________________________
consensus GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
 
. : . : . : . : . : . :
rJMSF002I12+ CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
rJMSF016M15+ CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
                      ____________________________________________________________
consensus CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
 
. : . : . : . : . : . :
rJMSF002I12+ TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
rJMSF016M15+ TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
                      ____________________________________________________________
consensus TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
 
. : . : . : . : . : . :
rJMSF002I12+ CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
rJMSF016M15+ CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
                      ____________________________________________________________
consensus CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
 
. : . : . : . : . : . :
rJMSF002I12+ AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
rJMSF016M15+ AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
                      ____________________________________________________________
consensus AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
 
. : . : . : . : . : . :
rJMSF002I12+ TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
rJMSF016M15+ TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
                      ____________________________________________________________
consensus TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
 
. : . : . : . : . : . :
rJMSF002I12+ TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
rJMSF016M15+ TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
                      ____________________________________________________________
consensus TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
 
. : . : . : . : . : . :
rJMSF002I12+ GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATT
rJMSF016M15+ GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATTG
                      ____________________________________________________________
consensus GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATTG