Contig 004237:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002I12+                                                          TCAGAAAGCGTT
rJMSF016M15+                                                       TCATCAGAAAGCGNT
                      ____________________________________________________________
consensus                                                          TCATCAGAAAGCGTT
 
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rJMSF002I12+          AGAAATGCGGGATGAGCGGAGGTTAGAAAATCGCCGAGCATTGCTAATATATGGTCGGAT
rJMSF016M15+          AGNAATGCGGGATGAGCGGAGGTTAGAAATCGCCGAGCATTTGCTAATATATGGTCGGAT
                      ____________________________________________________________
consensus             AGAAATGCGGGATGAGCGGAGGTTAGAAATTGGCGGGGCTTTGCTAATATATGGTCGGAT
 
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rJMSF002I12+          GCTGTATTNGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
rJMSF016M15+          GCTGTATTTGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
                      ____________________________________________________________
consensus             GCTGTATTTGGCATCTCATTATTCATTCTTTTGTACTTCAATCAGAACAAAGTGTCTTTG
 
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rJMSF002I12+          CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
rJMSF016M15+          CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
                      ____________________________________________________________
consensus             CTCAAATTTACAGGTTACAAATTAATAAATAATGTCTCAGATACTGGGAAGGCCCTTCTC
 
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rJMSF002I12+          ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
rJMSF016M15+          ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
                      ____________________________________________________________
consensus             ATTATTCTCATTACTGATATATTTTTAGGGTATCATTCTGAATCTGGTTGGCAGACTTTG
 
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rJMSF002I12+          TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
rJMSF016M15+          TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
                      ____________________________________________________________
consensus             TCAGAGGTAATCGTGGAGCATTATGGGTTTGAGGTTGATCAGGCTGCCATAACGATATTT
 
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rJMSF002I12+          GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
rJMSF016M15+          GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
                      ____________________________________________________________
consensus             GTTTGCATTGTTCCAGTTGTCATCGATGCATGCGTGAAGCTTTGGTTGTTCAAGTACCTA
 
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rJMSF002I12+          CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
rJMSF016M15+          CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
                      ____________________________________________________________
consensus             CCAAAGATATCCCCAAAGGTGTCAAATATTTTCCGGGAAATGAAGAGGCATTAGAAGGAT
 
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rJMSF002I12+          TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
rJMSF016M15+          TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
                      ____________________________________________________________
consensus             TGTTTTCCGATCCTCTCCAGCACCTATTGCAAGAGTTCATCTCCCGTTCTCTCGTTTACA
 
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rJMSF002I12+          CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
rJMSF016M15+          CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
                      ____________________________________________________________
consensus             CGATTTTCCAACTCGCCATTTTCTTCTCTTGGTCTTGGCTATAGAGGATCCTGGATATGG
 
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rJMSF002I12+          AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
rJMSF016M15+          AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
                      ____________________________________________________________
consensus             AACCATGAGTCCATGACCCGAATTTAATTGTCTTGGATATATTCACACATATAGCCATAG
 
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rJMSF002I12+          TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
rJMSF016M15+          TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
                      ____________________________________________________________
consensus             TATATCTGGGAATGTATGTATGTATGTATTCCAACAAATTTTGTGGTTCTTGTCATTGAT
 
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rJMSF002I12+          TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
rJMSF016M15+          TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
                      ____________________________________________________________
consensus             TCCCCAATATATATTCTCAGAGGTCTGGAAAGCTCTCCTTTACCCGTGGAGTTGTTGAAG
 
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rJMSF002I12+          GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATT 
rJMSF016M15+          GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATTG
                      ____________________________________________________________
consensus             GCTACAGCTGAAGAAAAGTTGTTGTGCTTGCCAGTTGCCACCCTCTTTTCTTTCTCATTG