Contig 004236:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044H02Sequence647004236 (3)ref|XP_009613725.1|1e-118PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]536006849 (8)ref|XP_006362686.1|2e-35PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMSF016M03Sequence529006849 (8)ref|XP_006362686.1|7e-56PREDICTED: subtilisin-like protease-like [Solanum tuberosum]771004236 (3)ref|XP_009613725.1|4e-97PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMSF034I16Sequence703004236 (3)ref|XP_009613725.1|4e-136PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]778006849 (8)ref|XP_009613725.1|5e-79PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF034I16+                                                        ACTTTAGCATTCCTN
                      ____________________________________________________________
consensus                                                          ACTTTAGCATTCCTN
 
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JMSF034I16+           GGGACCAAAACCGGAATCCGGCCATCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGCCCA
                      ____________________________________________________________
consensus             GGGACCAAAACCGGAATCCGGCCATCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGCCCA
 
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JMSF034I16+           AATTTCCTCACCCTGGAGATTCTGAAACCGGATTTCGTCGCCCCGGGAGTGAACATTCTC
                      ____________________________________________________________
consensus             AATTTCCTCACCCTGGAGATTCTGAAACCGGATTTCGTCGCCCCGGGAGTGAACATTCTC
 
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JMSF034I16+           GCCGCGTGGACCGGCGATTTGGGACCGTCCAGTCTGCCGACAGATCAACGGAGAACAAAT
JMFF044H02+                             TTGGGACCGTCCAGTCTGCCGACAGATCAACGGAGAACAAAT
                      ____________________________________________________________
consensus             GCCGCGTGGACCGGCGATTTGGGACCGTCCAGTCTGCCGACAGATCAACGGAGAACAAAT
 
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JMSF034I16+           TTCAACATCTTGTCGGGAACCTCCATGTCCTGCCCACACGTCAGCGGCATCGCCGCTTTG
JMFF044H02+           TTCAACATCTTGTCGGGAACCTCCATGTCCTGCCCACACGTCAGCGGCATCGCCGCTTTG
                      ____________________________________________________________
consensus             TTCAACATCTTGTCGGGAACCTCCATGTCCTGCCCACACGTCAGCGGCATCGCCGCTTTG
 
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JMSF034I16+           CTTAAAGCCCGCCACCCAGATTGGAGCCCCGCCGCCATTAAATCAGCGCTCATGACAACG
JMFF044H02+           CTTAAAGCCCGCCACCCAGATTGGAGCCCCGCCGCCATTAAATCAGCGCTCATGACAACG
rJMSF016M03+                                                  AATCAGCGCTCATGACAACG
                      ____________________________________________________________
consensus             CTTAAAGCCCGCCACCCAGATTGGAGCCCCGCCGCCATTAAATCAGCGCTCATGACAACG
 
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JMSF034I16+           GCGTACGTTCACGACAACACATTCCGTTCTCTCAAGGACGCCGCCACAGGGACAAACTCA
JMFF044H02+           GCGTACGTTCACGACAACACATTCCGTTCTCTCAAGGACGCCGCCACAGGGACAAACTCA
rJMSF016M03+          GCGTACGTTCACGACAACACATTCCGTTCTCTCAAGGACGCCGCCACAGGGACAAACTCA
                      ____________________________________________________________
consensus             GCGTACGTTCACGACAACACATTCCGTTCTCTCAAGGACGCCGCCACAGGGACAAACTCA
 
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JMSF034I16+           ACCTCGTACGACCACGGCGCCGGCCACATAAACCCGCTAAAAGCCGTGAATCCCGGCCTA
JMFF044H02+           ACCTCGTACGACCACGGCGCCGGCCACATAAACCCGCTAAAAGCCGTGAATCCCGGCCTA
rJMSF016M03+          ACCTCGTACGACCACGGCGCCGGCCACATAAACCCGCTAAAAGCCGTGAATCCCGGCCTA
                      ____________________________________________________________
consensus             ACCTCGTACGACCACGGCGCCGGCCACATAAACCCGCTAAAAGCCGTGAATCCCGGCCTA
 
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JMSF034I16+           ATCTACGACATCTCGCCGCAGGATTACTTCGATTTCCTCTGCACCCAGGATCTCGAGCCC
JMFF044H02+           ATCTACGACATCTCGCCGCAGGATTACTTCGATTTCCTCTGCACCCAGGATCTCGAGCCC
rJMSF016M03+          ATCTACGACATCTCGCCGCAGGATTACTTCGATTTCCTCTGCACCCAGGATCTCGAGCCC
                      ____________________________________________________________
consensus             ATCTACGACATCTCGCCGCAGGATTACTTCGATTTCCTCTGCACCCAGGATCTCGAGCCC
 
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JMSF034I16+           GCCCAGCTCGCAGTTTTCGCGAAATTCTCCAACCGGACCTGCAAACACGCGATCTCCAAT
JMFF044H02+           GCCCAGCTCGCAGTTTTCGCGAAATTCTCCAACCGGACCTGCAAACACGCGATCTCCAAT
rJMSF016M03+          GCCCAGCTCGCAGTTTTCGCGAAATTCTCCAACCGGACCTGCAAACACGCGATCTCCAAT
                      ____________________________________________________________
consensus             GCCCAGCTCGCAGTTTTCGCGAAATTCTCCAACCGGACCTGCAAACACGCGATCTCCAAT
 
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JMSF034I16+           CCCGGAGACTTGAACTATCCGGCCATCTCAATGATATTCCCGGAAGACCGTCGGGTTTCG
JMFF044H02+           CCCGGAGACTTGAACTATCCGGCCATCTCAATGATATTCCCGGAAGACCGTCGGGTTTCG
rJMSF016M03+          CCCGGAGACTTGAACTATCCGGCCATCTCAATGATATTCCCGGAAGACCGTCGGGTTTCG
                      ____________________________________________________________
consensus             CCCGGAGACTTGAACTATCCGGCCATCTCAATGATATTCCCGGAAGACCGTCGGGTTTCG
 
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JMSF034I16+           GCGGTGACCCTTCACCGGACCGTCACCAACGTTGGCCCTCCGGTCTCCAGTTACCACGTA
JMFF044H02+           GCGGTGACCCTTCACCGGACCGTCACCAACGTTGGCCCTCCGGTCTCCAGTTACCACGTA
rJMSF016M03+          GCGGTGACCCTTCACCGGACCGTCACCAACGTTGGCCCTCCGGTCTCCAGTTACCACGTA
                      ____________________________________________________________
consensus             GCGGTGACCCTTCACCGGACCGTCACCAACGTTGGCCCTCCGGTCTCCAGTTACCACGTA
 
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JMSF034I16+           GCAATCACGGAATTCAAAGGCGCCACT                                 
JMFF044H02+           GCAATCACGGAATTCAAAGGCGCCACTGTCAAGATTGAGCCCACAAGACTGAACTTCACG
rJMSF016M03+          GCAATCACGGAATTCAAAGGCGCCACTGTCAAGATTGAGCCCACAAGACTGAACTTCACG
                      ____________________________________________________________
consensus             GCAATCACGGAATTCAAAGGCGCCACTGTCAAGATTGAGCCCACAAGACTGAACTTCACG
 
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JMFF044H02+           AGGAAAAACCAGAGACTGTCGTACAAGATAACTTTTACCAGAAAAGAGCGGCAAACGGCG
rJMSF016M03+          AGGAAAAACCAGAGACTGTCGTACAAGATAACTTTTACCAGAAAAGAGCGGCAAACGGCG
                      ____________________________________________________________
consensus             AGGAAAAACCAGAGACTGTCGTACAAGATAACTTTTACCAGAAAAGAGCGGCAAACGGCG
 
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JMFF044H02+           CCAG                                                        
rJMSF016M03+          CCAGAGTTTGGGCACATGATTTGGAAAGATGGAAGTCATAAGGTGAGAAGCCCGATCATA
                      ____________________________________________________________
consensus             CCAGAGTTTGGGCACATGATTTGGAAAGATGGAAGTCATAAGGTGAGAAGCCCGATCATA
 
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rJMSF016M03+          GTCACATGGCTTACGCCTGTATGATCCATTACATTCCAGGCTACCTGCAAAATATTCACA
                      ____________________________________________________________
consensus             GTCACATGGCTTACGCCTGTATGATCCATTACATTCCAGGCTACCTGCAAAATATTCACA
 
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rJMSF016M03+          ATAAGAATCTACTGTCTGAGCCAGATAGATGCTTAAGATTTGGCTACTTAGTTTATTTCA
                      ____________________________________________________________
consensus             ATAAGAATCTACTGTCTGAGCCAGATAGATGCTTAAGATTTGGCTACTTAGTTTATTTCA
 
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rJMSF016M03+          AGAATTATTCAAGACTGTTTTTCGTTATGTTACTGTGGTACGGTGCATCGTCACTCCATT
                      ____________________________________________________________
consensus             AGAATTATTCAAGACTGTTTTTCGTTATGTTACTGTGGTACGGTGCATCGTCACTCCATT