Contig 004234:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016F16Sequence535004234 (2)ref|XP_009793596.1|102PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris]779004234 (2)ref|XP_006340532.1|2e-11PREDICTED: uncharacterized protein LOC102604464 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016F16- GGTGCCTACATACAAAGTACTCCGTGTCGCCGGTTCCGATTGAGCAGACATT
                      ____________________________________________________________
consensus GGTGCCTACATACAAAGTACTCCGTGTCGCCGGTTCCGATTGAGCAGACATT
 
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JMSF016F16- GCTTCCAACGACGTCGTTTTCGCCGTCTTCTTCTTCTCCTCCATCTCCACAGAGGACTCT
                      ____________________________________________________________
consensus GCTTCCAACGACGTCGTTTTCGCCGTCTTCTTCTTCTCCTCCATCTCCACAGAGGACTCT
 
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JMSF016F16- GTGTTTTCGTGATCTGAGAGGGGATCGATCTTCGCCGCGTGACCACAGATCCATATCTTC
                      ____________________________________________________________
consensus GTGTTTTCGTGATCTGAGAGGGGATCGATCTTCGCCGCGTGACCACAGATCCATATCTTC
 
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JMSF016F16- CAACGATGGTGCATCGATTTGGGGATCTTGCCGTCTTCTCCATCTGCTTCTATAATCGAT
                      ____________________________________________________________
consensus CAACGATGGTGCATCGATTTGGGGATCTTGCCGTCTTCTCCATCTGCTTCTATAATCGAT
 
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JMSF016F16- CTTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
rJMSF016F16+ TTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
                      ____________________________________________________________
consensus CTTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
 
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JMSF016F16- ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
rJMSF016F16+ ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
                      ____________________________________________________________
consensus ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
 
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JMSF016F16- TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
rJMSF016F16+ TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
                      ____________________________________________________________
consensus TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
 
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JMSF016F16- TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
rJMSF016F16+ TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
                      ____________________________________________________________
consensus TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
 
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JMSF016F16- ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGG
rJMSF016F16+ ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGGTCGCTTCT
                      ____________________________________________________________
consensus ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGGTCGCTTCT
 
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rJMSF016F16+ TCAGGAATGCTGAGTTAGAAAGAATGGTTGATCGGGATTTGTCTCGTTTATATCTTGATT
                      ____________________________________________________________
consensus TCAGGAATGCTGAGTTAGAAAGAATGGTTGATCGGGATTTGTCTCGTTTATATCTTGATT
 
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rJMSF016F16+ CTTGAGCATGGTAGCTATTTCCAAACCCCTGGGTGCTAGGCCATGTTGCGGTGTATTTGG
                      ____________________________________________________________
consensus CTTGAGCATGGTAGCTATTTCCAAACCCCTGGGTGCTAGGCCATGTTGCGGTGTATTTGG
 
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rJMSF016F16+ TTGCTAAAAGGACACCCTAGAAGGATGCAAGAAAGAGATATCATGAAATGACGCAAATAC
                      ____________________________________________________________
consensus TTGCTAAAAGGACACCCTAGAAGGATGCAAGAAAGAGATATCATGAAATGACGCAAATAC
 
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rJMSF016F16+ CCTCCTTTCAAACGGTCATCTCGAAAATGTTGACGGAGGACCAAAATTGTCCTCGTCACA
                      ____________________________________________________________
consensus CCTCCTTTCAAACGGTCATCTCGAAAATGTTGACGGAGGACCAAAATTGTCCTCGTCACA
 
. : . : . : . : . : . :
rJMSF016F16+ ATAAGAGTGTTCACAAATTGTCTGATTTTTTTTATAGAGGACCAAAATTGTCCGTGCCAC
                      ____________________________________________________________
consensus ATAAGAGTGTTCACAAATTGTCTGATTTTTTTTATAGAGGACCAAAATTGTCCGTGCCAC
 
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rJMSF016F16+ TATAAGTCTAGGACCAAAAACCCACTCCACATTGAATATAGAAAATAACCTAATTCCCTT
                      ____________________________________________________________
consensus TATAAGTCTAGGACCAAAAACCCACTCCACATTGAATATAGAAAATAACCTAATTCCCTT
 
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rJMSF016F16+ TTTCTAGCTGTTGGCAAATTATATCGTGTACCAGGACGTACAATTCATTGTGCACCCTAA
                      ____________________________________________________________
consensus TTTCTAGCTGTTGGCAAATTATATCGTGTACCAGGACGTACAATTCATTGTGCACCCTAA
 
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rJMSF016F16+ GAGTTTATGTGTATTTTATGTTAAGAGTTTATGTGTATTATGTATTATGTTAGATTATGT
                      ____________________________________________________________
consensus GAGTTTATGTGTATTTTATGTTAAGAGTTTATGTGTATTATGTATTATGTTAGATTATGT