Contig 004234:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016F16Sequence535004234 (2)ref|XP_009793596.1|102PREDICTED: uncharacterized protein LOC104240451 [Nicotiana sylvestris]779004234 (2)ref|XP_006340532.1|2e-11PREDICTED: uncharacterized protein LOC102604464 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF016F16-                   GGTGCCTACATACAAAGTACTCCGTGTCGCCGGTTCCGATTGAGCAGACATT
                      ____________________________________________________________
consensus                     GGTGCCTACATACAAAGTACTCCGTGTCGCCGGTTCCGATTGAGCAGACATT
 
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JMSF016F16-           GCTTCCAACGACGTCGTTTTCGCCGTCTTCTTCTTCTCCTCCATCTCCACAGAGGACTCT
                      ____________________________________________________________
consensus             GCTTCCAACGACGTCGTTTTCGCCGTCTTCTTCTTCTCCTCCATCTCCACAGAGGACTCT
 
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JMSF016F16-           GTGTTTTCGTGATCTGAGAGGGGATCGATCTTCGCCGCGTGACCACAGATCCATATCTTC
                      ____________________________________________________________
consensus             GTGTTTTCGTGATCTGAGAGGGGATCGATCTTCGCCGCGTGACCACAGATCCATATCTTC
 
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JMSF016F16-           CAACGATGGTGCATCGATTTGGGGATCTTGCCGTCTTCTCCATCTGCTTCTATAATCGAT
                      ____________________________________________________________
consensus             CAACGATGGTGCATCGATTTGGGGATCTTGCCGTCTTCTCCATCTGCTTCTATAATCGAT
 
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JMSF016F16-           CTTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
rJMSF016F16+           TTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
                      ____________________________________________________________
consensus             CTTCGCCGCGTGACTGCAGACTTACGTAGAAGTTATGTTGCTATGAGGAGACAGCTTCTA
 
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JMSF016F16-           ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
rJMSF016F16+          ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
                      ____________________________________________________________
consensus             ATTAATCCACATGTACCAATGGATGGTAGTACCTCTCCAGATCTTGTTATGAAGAACTTA
 
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JMSF016F16-           TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
rJMSF016F16+          TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
                      ____________________________________________________________
consensus             TTGTCTCAAAACCCTGGTAGGATATATGTGTTTTTCTTTAGCATCTCTTCACGAACAACT
 
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JMSF016F16-           TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
rJMSF016F16+          TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
                      ____________________________________________________________
consensus             TGATTCTTGATCTTTTCATGGACTTGATTGTTTTTCTGTAGCATTCCTAGTACGTGTTAA
 
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JMSF016F16-           ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGG        
rJMSF016F16+          ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGGTCGCTTCT
                      ____________________________________________________________
consensus             ACTTTTATTCAAGTTAATTTCTTATGATTATACTTTGTATATAGCATATGGGTCGCTTCT
 
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rJMSF016F16+          TCAGGAATGCTGAGTTAGAAAGAATGGTTGATCGGGATTTGTCTCGTTTATATCTTGATT
                      ____________________________________________________________
consensus             TCAGGAATGCTGAGTTAGAAAGAATGGTTGATCGGGATTTGTCTCGTTTATATCTTGATT
 
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rJMSF016F16+          CTTGAGCATGGTAGCTATTTCCAAACCCCTGGGTGCTAGGCCATGTTGCGGTGTATTTGG
                      ____________________________________________________________
consensus             CTTGAGCATGGTAGCTATTTCCAAACCCCTGGGTGCTAGGCCATGTTGCGGTGTATTTGG
 
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rJMSF016F16+          TTGCTAAAAGGACACCCTAGAAGGATGCAAGAAAGAGATATCATGAAATGACGCAAATAC
                      ____________________________________________________________
consensus             TTGCTAAAAGGACACCCTAGAAGGATGCAAGAAAGAGATATCATGAAATGACGCAAATAC
 
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rJMSF016F16+          CCTCCTTTCAAACGGTCATCTCGAAAATGTTGACGGAGGACCAAAATTGTCCTCGTCACA
                      ____________________________________________________________
consensus             CCTCCTTTCAAACGGTCATCTCGAAAATGTTGACGGAGGACCAAAATTGTCCTCGTCACA
 
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rJMSF016F16+          ATAAGAGTGTTCACAAATTGTCTGATTTTTTTTATAGAGGACCAAAATTGTCCGTGCCAC
                      ____________________________________________________________
consensus             ATAAGAGTGTTCACAAATTGTCTGATTTTTTTTATAGAGGACCAAAATTGTCCGTGCCAC
 
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rJMSF016F16+          TATAAGTCTAGGACCAAAAACCCACTCCACATTGAATATAGAAAATAACCTAATTCCCTT
                      ____________________________________________________________
consensus             TATAAGTCTAGGACCAAAAACCCACTCCACATTGAATATAGAAAATAACCTAATTCCCTT
 
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rJMSF016F16+          TTTCTAGCTGTTGGCAAATTATATCGTGTACCAGGACGTACAATTCATTGTGCACCCTAA
                      ____________________________________________________________
consensus             TTTCTAGCTGTTGGCAAATTATATCGTGTACCAGGACGTACAATTCATTGTGCACCCTAA
 
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rJMSF016F16+          GAGTTTATGTGTATTTTATGTTAAGAGTTTATGTGTATTATGTATTATGTTAGATTATGT
                      ____________________________________________________________
consensus             GAGTTTATGTGTATTTTATGTTAAGAGTTTATGTGTATTATGTATTATGTTAGATTATGT