Contig 004231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009F09Sequence454006412 (2)ref|XP_009606060.1|2e-42PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like is795004231 (2)ref|XP_009760238.1|7e-118PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [N
JMSF015P02Sequence366006412 (2)ref|XP_009606060.1|2e-21PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like is719004231 (2)ref|XP_009760238.1|3e-104PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [N

Alignment

This contig is upended


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rJMSF009F09+                                          GCTCACATGCTTNGGTCGGGGAGCGCAC
                      ____________________________________________________________
consensus                                             GCTCACATGCTTNGGTCGGGGAGCGCAC
 
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rJMSF009F09+          AAGGCAATGGACGGTGCACATGTTGAGTTCCTGAGAGGAGTTTCCAATCCACTCGGAATC
                      ____________________________________________________________
consensus             AAGGCAATGGACGGTGCACATGTTGAGTTCCTGAGAGGAGTTTCCAATCCACTCGGAATC
 
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rJMSF009F09+          AAGGTGAGTCAGAAAATGGATCCGAGTGAGCTGGTCAGGCTTATAGATATTCTAAATCCT
rJMSF015P02+           AGGTGAGTCAGAAAATGGATCCGAGTGAGCTGGTCAGGCTTATAGATATTCTAAATCCT
                      ____________________________________________________________
consensus             AAGGTGAGTCAGAAAATGGATCCGAGTGAGCTGGTCAGGCTTATAGATATTCTAAATCCT
 
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rJMSF009F09+          AAAAACAAACCAGGAAGAATAACGGTGATAGCCAGAATGGGAGCCGACAACATGAGAGTG
rJMSF015P02+          AAAAACAAACCAGGAAGAATAACGGTGATAGCCAGAATGGGAGCCGACAACATGAGAGTG
                      ____________________________________________________________
consensus             AAAAACAAACCAGGAAGAATAACGGTGATAGCCAGAATGGGAGCCGACAACATGAGAGTG
 
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rJMSF009F09+          AAACTTCCCCATCTGATCAGGGCAGTTCGGAGTGCAGGTCAAATTGTTACTTGGGTCAGT
rJMSF015P02+          AAACTTCCCCATCTGATCAGGGCAGTTCGGAGTGCAGGTCAAATTGTTACTTGGGTCAGT
                      ____________________________________________________________
consensus             AAACTTCCCCATCTGATCAGGGCAGTTCGGAGTGCAGGTCAAATTGTTACTTGGGTCAGT
 
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rJMSF009F09+          GATCCTATGCATGGGAATACCACTAAGGCTCCTTGTGGACTGAAAACCCGATCCTTCGAT
rJMSF015P02+          GATCCTATGCATGGGAATACCACTAAGGCTCCTTGTGGACTGAAAACCCGATCCTTCGAT
                      ____________________________________________________________
consensus             GATCCTATGCATGGGAATACCACTAAGGCTCCTTGTGGACTGAAAACCCGATCCTTCGAT
 
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rJMSF009F09+          GCAATCAGGGCTGAGCTTAGAGCATTCTTTGATGTACACGACCAAGAAGGGAGCTTCCCG
rJMSF015P02+          GCAATCAGGGCTGAGCTTAGAGCATTCTTTGATGTACACGACCAAGAAGGGAGCTTCCCG
                      ____________________________________________________________
consensus             GCAATCAGGGCTGAGCTTAGAGCATTCTTTGATGTACACGACCAAGAAGGGAGCTTCCCG
 
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rJMSF009F09+          GGGGGTGTGCATCTGGAGATGACTGGGCAGAACGTGACAGAGTGCGTTGGAGGGTCTCGC
rJMSF015P02+          GGGGGTGTGCATCTGGAGATGACTGGGCAGAACGTGACAGAGTGCGTTGGAGGGTCTCGC
                      ____________________________________________________________
consensus             GGGGGTGTGCATCTGGAGATGACTGGGCAGAACGTGACAGAGTGCGTTGGAGGGTCTCGC
 
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rJMSF009F09+          ACAGTTACTTACAACGACCTAAGCTCGCGGTATCACACACACTGTGATCCAAGACTTAAT
rJMSF015P02+          ACAGTTACTTACAACGACCTAAGCTCGCGGTATCACACACACTGTGATCCAAGACTTAAT
                      ____________________________________________________________
consensus             ACAGTTACTTACAACGACCTAAGCTCGCGGTATCACACACACTGTGATCCAAGACTTAAT
 
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rJMSF009F09+          GCTTCTCAGTCACTCGAGCTGGCCTTCAACATCGCAGAGCGCCTCCGAAGAAGGAGGCTT
rJMSF015P02+          GCTTCTCAGTCACTCGAGCTGGCCTTCAACATCGCAGAGCGCCTCCGAAGAAGGAGGCTT
                      ____________________________________________________________
consensus             GCTTCTCAGTCACTCGAGCTGGCCTTCAACATCGCAGAGCGCCTCCGAAGAAGGAGGCTT
 
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rJMSF009F09+          GGATCTCTCTTCAAGCTCTGAAACCATTGGCCTTGCAGGGTCAGGTCTGGTTTTAGTTTG
rJMSF015P02+          GGATCTCTCTTCAAGCTCTGAAACCATTGGCCTTGCAGGGTCAGGTCTGGTTTTAGTTTG
                      ____________________________________________________________
consensus             GGATCTCTCTTCAAGCTCTGAAACCATTGGCCTTGCAGGGTCAGGTCTGGTTTTAGTTTG
 
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rJMSF009F09+          GGTAAGAGAATCAAACACCTATTTCACCATCTACAGTGGATTACCGGTAATATAAGATGC
rJMSF015P02+          GGTAAGAGAATCAAACACCTATTTCACCATCTACAGTGGATTACCGGTAATATAAGATGC
                      ____________________________________________________________
consensus             GGTAAGAGAATCAAACACCTATTTCACCATCTACAGTGGATTACCGGTAATATAAGATGC
 
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rJMSF009F09+          TATACAACTTAGAAGCTTTCTTGAATGTAAGCCTCAACTATAAAGTTAGGTTGCAGTTTT
rJMSF015P02+          TATACAACTTAGAAGCTTTCTTGAATGTAAGCCTCAACTATAAAGTTAGGTTGCAGTTTT
                      ____________________________________________________________
consensus             TATACAACTTAGAAGCTTTCTTGAATGTAAGCCTCAACTATAAAGTTAGGTTGCAGTTTT
 
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rJMSF009F09+          GAAGTATGATGTTAGTAAGTACAGCAATAATCATCTGCTGACATAAC             
rJMSF015P02+          GAAGTATGATGTTAGTAAGTACAGCAATAATCATCTGCTGACATAACTGGGTTTGCTAAA
                      ____________________________________________________________
consensus             GAAGTATGATGTTAGTAAGTACAGCAATAATCATCTGCTGACATAACTGGGTTTGCTAAA