Contig 004229:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015K08Sequence426007827 (3)ref|XP_004238236.1|5e-08PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers751004229 (3)gb|AFK47412.1|1e-52unknown [Lotus japonicus]
JMSF015K18Sequence552007827 (3)ref|XP_004238236.1|2e-50PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers780004229 (3)ref|XP_011083720.1|4e-97PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]
JMSF038B03Sequence713007827 (3)ref|XP_004238236.1|8e-86PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers909004229 (3)ref|XP_011083720.1|3e-129PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


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rJMSF038B03+                                                           GAATGGTTCAT
                      ____________________________________________________________
consensus                                                              GAATGGTTCAT
 
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rJMSF038B03+          CGCCAGGTAGCCACCATCGCGTGGTTNGAAGCTGATTCCGTTTGTGGAAGTCACTCTGTT
                      ____________________________________________________________
consensus             CGCCAGGTAGCCACCATCGCGTGGTTNGAAGCTGATTCCGTTTGTGGAAGTCACTCTGTT
 
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rJMSF038B03+          GCAATTCCTATAGTTCTTGTGTTGCCATATTTTTTTCGTCTCTTTCAATGTCTTCGGCAA
rJMSF015K08+                                                                     A
rJMSF015K18+                                                                     A
                      ____________________________________________________________
consensus             GCAATTCCTATAGTTCTTGTGTTGCCATATTTTTTTCGTCTCTTTCAATGTCTTCGGCAA
 
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rJMSF038B03+          TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
rJMSF015K08+          TACACGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAANGTATTCGACTGCAGTA
rJMSF015K18+          TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
                      ____________________________________________________________
consensus             TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
 
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rJMSF038B03+          CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
rJMSF015K08+          CCGGTGATATTTCTATCAGCCNNTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
rJMSF015K18+          CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
                      ____________________________________________________________
consensus             CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
 
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rJMSF038B03+          TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
rJMSF015K08+          TATCGACCTTTGTGGCTACTCTCCAGTGTTNTGAACTCTCTGTACTCGTTNTACTGGGAT
rJMSF015K18+          TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
                      ____________________________________________________________
consensus             TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
 
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rJMSF038B03+          CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
rJMSF015K08+          CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGANTCTTCAAGTTCAACANGCCTAAT
rJMSF015K18+          CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
                      ____________________________________________________________
consensus             CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
 
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rJMSF038B03+          TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
rJMSF015K08+          TTCTTNTCAAATGTGTCATATGGACGACAATGGGTTTATTTNTGGGTAATCGGGAGCAAC
rJMSF015K18+          TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
                      ____________________________________________________________
consensus             TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
 
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rJMSF038B03+          CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
rJMSF015K08+          CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCATAGTGCGTCACAATTACCT
rJMSF015K18+          CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
                      ____________________________________________________________
consensus             CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
 
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rJMSF038B03+          AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
rJMSF015K08+          AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
rJMSF015K18+          AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
                      ____________________________________________________________
consensus             AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
 
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rJMSF038B03+          TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
rJMSF015K08+          TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGANTGA
rJMSF015K18+          TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
                      ____________________________________________________________
consensus             TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
 
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rJMSF038B03+          TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
rJMSF015K08+          TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
rJMSF015K18+          TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
                      ____________________________________________________________
consensus             TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
 
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rJMSF038B03+          AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
rJMSF015K08+          AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
rJMSF015K18+          AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
                      ____________________________________________________________
consensus             AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
 
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rJMSF038B03+          GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
rJMSF015K08+          GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
rJMSF015K18+          GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
                      ____________________________________________________________
consensus             GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
 
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rJMSF038B03+          ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
rJMSF015K08+          ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACNCGGC
rJMSF015K18+          ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
                      ____________________________________________________________
consensus             ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
 
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rJMSF038B03+          CAATCTCTCGAGTTCTTCCATAGGAACTTTTTTGGAAGCTATTATACAATCATTGAGAT 
rJMSF015K08+          CAATCTCTCGAGTTCTTCCATAGGAAC-TTT                             
rJMSF015K18+          CAATCTCTCGAGTTCTTCCATAGGAAC-TTTTTGGAAGCTATTATACAATCATTGAGATC
                      ____________________________________________________________
consensus             CAATCTCTCGAGTTCTTCCATAGGAAC-TTTTTGGAAGCTATTATACAATCATTGAGATC