Contig 004228:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015D01Sequence414011960 (2)ref|XP_009625610.1|4e-37PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [816004228 (2)ref|XP_009800822.1|3e-136PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Nicot
JMSF051L09Sequence722011960 (2)ref|XP_009625610.1|2e-110PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [760004228 (2)ref|XP_009800822.1|5e-126PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Nicot

Alignment

This contig is upended


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rJMSF015D01+                                  ATCAACTGTGCTACACNANTTCCCCACGCTGTTGGT
                      ____________________________________________________________
consensus                                     ATCAACTGTGCTACACNANTTCCCCACGCTGTTGGT
 
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rJMSF051L09+                                      GGGATGCCTGTACTGTTGTGTATTTTGGAGAT
rJMSF015D01+          GCTGCATATTCTTTGAAGAGGGATGGAAGGGATGCCTGTACTGTTGTGTATTTTGGAGAT
                      ____________________________________________________________
consensus             GCTGCATATTCTTTGAAGAGGGATGGAAGGGATGCCTGTACTGTTGTGTATTTTGGAGAT
 
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rJMSF051L09+          GGAGGCTCTAGTACGGGTGACTTCCATGCTGCATTAAATTTTGCGGGGGTGATGGAGGCG
rJMSF015D01+          GGAGGCTCTAGTACGGGTGACTTCCATGCTGCATTAAATTTTGCGGGGGTGATGGAGGCG
                      ____________________________________________________________
consensus             GGAGGCTCTAGTACGGGTGACTTCCATGCTGCATTAAATTTTGCGGGGGTGATGGAGGCG
 
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rJMSF051L09+          CCAGTGATTTTTTTCTGCCGGAACAATGGCTGGGCAATAAGTACCCCTGTTAGTGACCAG
rJMSF015D01+          CCAGTGATTTTTTTCTGCCGGAACAATGGCTGGGCAATAAGTACCCCTGTTAGTGACCAG
                      ____________________________________________________________
consensus             CCAGTGATTTTTTTCTGCCGGAACAATGGCTGGGCAATAAGTACCCCTGTTAGTGACCAG
 
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rJMSF051L09+          TTTAGAAGCGATGGTGTTGTTAGCAGGGGGAAAGCGTATGGAGTTCGCAGCATTCGTGTT
rJMSF015D01+          TTTAGAAGCGATGGTGTTGTTAGCAGGGGGAAAGCGTATGGAGTTCGCAGCATTCGTGTT
                      ____________________________________________________________
consensus             TTTAGAAGCGATGGTGTTGTTAGCAGGGGGAAAGCGTATGGAGTTCGCAGCATTCGTGTT
 
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rJMSF051L09+          GATGGAAATGATGCTGTTGCTATATTCAGTGCAATGAGTGCTGCTCGTGAGATGGCTGTT
rJMSF015D01+          GATGGAAATGATGCTGTTGCTATATTCAGTGCAATGAGTGCTGCTCGTGAGATGGCTGTT
                      ____________________________________________________________
consensus             GATGGAAATGATGCTGTTGCTATATTCAGTGCAATGAGTGCTGCTCGTGAGATGGCTGTT
 
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rJMSF051L09+          AAGGAGCATAAGCCTGTTCTAATCGAGGCCCTCACATACAGAGCAGGACATCACTCCACT
rJMSF015D01+          AAGGAGCATAAGCCTGTTCTAATCGAGGCCCTCACATACAGAGCAGGACATCACTCCACT
                      ____________________________________________________________
consensus             AAGGAGCATAAGCCTGTTCTAATCGAGGCCCTCACATACAGAGCAGGACATCACTCCACT
 
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rJMSF051L09+          TCAGATGACTCCACCAAATATCGTCCTGCCGATGAAATTGAACTGTGGAAAAGTGCACGG
rJMSF015D01+          TCAGATGACTCCACCAAATATCGTCCTGCCGATGAAATTGAACTGTGGAAAAGTGCACGG
                      ____________________________________________________________
consensus             TCAGATGACTCCACCAAATATCGTCCTGCCGATGAAATTGAACTGTGGAAAAGTGCACGG
 
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rJMSF051L09+          GATCCTGTAACCAGGTTTCGGAAATGGATTCAAAGAGAAGCTTGGTGGGACACTGCAGCT
rJMSF015D01+          GATCCTGTAACCAGGTTTCGGAAATGGATTCAAAGAGAAGCTTGGTGGGACACTGCAGCT
                      ____________________________________________________________
consensus             GATCCTGTAACCAGGTTTCGGAAATGGATTCAAAGAGAAGCTTGGTGGGACACTGCAGCT
 
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rJMSF051L09+          GAATCACAACTTCGTAGCAGTCTCAGGAAGCAGGTATTACATGCAATTCAAGTAGCAGAA
rJMSF015D01+          GAATCACAACTTCGTAGCAGTCTCAGGAAGCAGGTATTACATGCAATTCAAGTAGCAGAA
                      ____________________________________________________________
consensus             GAATCACAACTTCGTAGCAGTCTCAGGAAGCAGGTATTACATGCAATTCAAGTAGCAGAA
 
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rJMSF051L09+          AGAACAGAGAAACCACCTATCAGTGAAGCGTTTACAGATGTTTATGATGTTCCTCCTACC
rJMSF015D01+          AGAACAGAGAAACCACCTATCAGTGAAGCGTTTACAGATGTTTATGATGTTCCTCCTACC
                      ____________________________________________________________
consensus             AGAACAGAGAAACCACCTATCAGTGAAGCGTTTACAGATGTTTATGATGTTCCTCCTACC
 
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rJMSF051L09+          AACCTACGCGAGCAAGAGATGTCACTCAGAGACACCATCACAAGCCATCCGCAGGACTAT
rJMSF015D01+          AACCTACGCGAGCAAGAGATGTCACTCAGAGACACCATCACAAGCCATCCGCAGGACTAT
                      ____________________________________________________________
consensus             AACCTACGCGAGCAAGAGATGTCACTCAGAGACACCATCACAAGCCATCCGCAGGACTAT
 
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rJMSF051L09+          CCTTCTGATGTTCCTTTCTAGATCCATTTATTTTCATTTTTAGGAAATAAAAGTTATGGG
rJMSF015D01+          CCTTCTGATGTTCCTTTCTAGATCCATTTATTTTCATTTTTAGGAAATAAAAGTTATGGG
                      ____________________________________________________________
consensus             CCTTCTGATGTTCCTTTCTAGATCCATTTATTTTCATTTTTAGGAAATAAAAGTTATGGG
 
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rJMSF051L09+          AAGATAATCGGCACTGATTGCTGCCATCAATCAATATGATGTGAACATCTGAC       
rJMSF015D01+          AAGATAATCGGCACTGATTGCTGCCATCAATCAATATGATGTGAACATCTGACTGAATCT
                      ____________________________________________________________
consensus             AAGATAATCGGCACTGATTGCTGCCATCAATCAATATGATGTGAACATCTGACTGAATCT