Contig 004227:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046H22+                                           AAGACCCCCTCCAGTGTACCGTGAAAN
                      ____________________________________________________________
consensus                                              AAGACCCCCTCCAGTGTACCGTGAAAN
 
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rJMSF046H22+          CCCGTGCTCGTGAATATGACTCTATATCTGGCTCAAAACGTGCATACACTGCACTGGATG
rJMSF015A04+                  CGTGAATATGACTCTATATCTGGCTCAAAACGTGCATACACTGCACTGGATG
                      ____________________________________________________________
consensus             CCCGTGCTCGTGAATATGACTCTATATCTGGCTCAAAACGTGCATACACTGCACTGGATG
 
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rJMSF046H22+          ATGTTCCTCCTCAATATGTTGAGGCAGGAGTTCGCCGTTCTCGTGCACGTTTGGAGTATG
rJMSF015A04+          ATGTTCCTCCTCAATATGTTGAGGCAGGAGTTCGCCGTTCTCGTGCACGTTTGGAGTATG
                      ____________________________________________________________
consensus             ATGTTCCTCCTCAATATGTTGAGGCAGGAGTTCGCCGTTCTCGTGCACGTTTGGAGTATG
 
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rJMSF046H22+          ACTTTGGAGGACGAAGTGCTTCTCAGTATGGGGATGCCTATGGTGACAGACCCGGGAGGC
rJMSF015A04+          ACTTTGGAGGACGAAGTGCTTCTCAGTATGGGGATGCCTATGGTGACAGACCCGGGAGGC
                      ____________________________________________________________
consensus             ACTTTGGAGGACGAAGTGCTTCTCAGTATGGGGATGCCTATGGTGACAGACCCGGGAGGC
 
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rJMSF046H22+          CTAATCTTGGATATAGTAGCAGCAGAAGTTCTATGGCTAGTCAAGATTCTCATGGCCTTT
rJMSF015A04+          CTAATCTTGGATATAGTAGCAGCAGAAGTTCTATGGCTAGTCAAGATTCTCATGGCCTTT
                      ____________________________________________________________
consensus             CTAATCTTGGATATAGTAGCAGCAGAAGTTCTATGGCTAGTCAAGATTCTCATGGCCTTT
 
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rJMSF046H22+          ATAGTAGTCGCCAGGGTATGGGTTATGACAGAGGCTCCTATGGTGGTAGTGATGTTGGTG
rJMSF015A04+          ATAGTAGTCGCCAGGGTATGGGTTATGACAGAGGCTCCTATGGTGGTAGTGATGTTGGTG
                      ____________________________________________________________
consensus             ATAGTAGTCGCCAGGGTATGGGTTATGACAGAGGCTCCTATGGTGGTAGTGATGTTGGTG
 
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rJMSF046H22+          GAGTGTACACTTCAGGCTATAGTGGTGATTACATATCTCATGGCAGTGATATGGGAGGCA
rJMSF015A04+          GAGTGTACACTTCAGGCTATAGTGGTGATTACATATCTCATGGCAGTGATATGGGAGGCA
                      ____________________________________________________________
consensus             GAGTGTACACTTCAGGCTATAGTGGTGATTACATATCTCATGGCAGTGATATGGGAGGCA
 
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rJMSF046H22+          GCTCTTATTCATCGATTTATTCTAATCGTGACCTGGGTGGTGGTGGCTATATGAGGAGTG
rJMSF015A04+          GCTCTTATTCATCGATTTATTCTAATCGTGACCTGGGTGGTGGTGGCTATATGAGGAGTG
                      ____________________________________________________________
consensus             GCTCTTATTCATCGATTTATTCTAATCGTGACCTGGGTGGTGGTGGCTATATGAGGAGTG
 
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rJMSF046H22+          GTGGTTCTAGATCTTATTATTGAGATTTGAATGGACAAAGAGGCTGCAGGACCTGCACTA
rJMSF015A04+          GTGGTTCTAGATCTTATTATTGAGATTTGAATGGACAAAGAGGCTGCAGGACCTGCACTA
                      ____________________________________________________________
consensus             GTGGTTCTAGATCTTATTATTGAGATTTGAATGGACAAAGAGGCTGCAGGACCTGCACTA
 
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rJMSF046H22+          GTTGAAGGCTGCATCATTTTGAATTGGAAGTATATTGAGCAAATAAAGCCTCTTTGTGGT
rJMSF015A04+          GTTGAAGGCTGCATCATTTTGAATTGGAAGTATATTGAGCAAATAAAGCCTCTTTGTGGT
                      ____________________________________________________________
consensus             GTTGAAGGCTGCATCATTTTGAATTGGAAGTATATTGAGCAAATAAAGCCTCTTTGTGGT
 
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rJMSF046H22+          TTGATGGCAAGATATGATAAACACTGGATATTGATATAAGGACGTGCAACTTGGAGGAAC
rJMSF015A04+          TTGATGGCAAGATATGATAAACACTGGATATTGATATAAGGACGTGCAACTTGGAGGAAC
                      ____________________________________________________________
consensus             TTGATGGCAAGATATGATAAACACTGGATATTGATATAAGGACGTGCAACTTGGAGGAAC
 
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rJMSF046H22+          TTAGATCTAGTGTATTGAGCTTTGGATGTCTCATATTTTTCTGCTGTAAGGAAACTTAAG
rJMSF015A04+          TTAGATCTAGTGTATTGAGCTTTGGATGTCTCATATTTTTCTGCTGTAAGGAAACTTAAG
                      ____________________________________________________________
consensus             TTAGATCTAGTGTATTGAGCTTTGGATGTCTCATATTTTTCTGCTGTAAGGAAACTTAAG
 
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rJMSF046H22+          AATTGTAGTGATGTGACTGCTAACATTCTGGTATTTATAGTTAATTTTTCCTACTCTCTT
rJMSF015A04+          AATTGTAGTGATGTGACTGCTAACATTCTGGTATTTATAGTTAATTTTTCCTACTCTCTT
                      ____________________________________________________________
consensus             AATTGTAGTGATGTGACTGCTAACATTCTGGTATTTATAGTTAATTTTTCCTACTCTCTT
 
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rJMSF046H22+          CC                                                          
rJMSF015A04+          CCTTTGGTAATTTGATGTAAGAGTGTACTTGAATAAAAAGAGGAGCACGGTTCAAGTGCT
                      ____________________________________________________________
consensus             CCTTTGGTAATTTGATGTAAGAGTGTACTTGAATAAAAAGAGGAGCACGGTTCAAGTGCT