Contig 004226:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032D19+                                              AATTATTGTGGTGTACAGAATTTT
rJMSF014M03+                     TATAATAATACCCGTGGTTTCAAAAAATTATTGTGGTGTACAGAATTTT
                      ____________________________________________________________
consensus                        TATAATAATACCCGTGGTTTCAAAAAATTATTGTGGTGTACAGAATTTT
 
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rJMSF032D19+          ATTTTGTAAAAACTTTCAAGTTGTGTTGTATCGACTACAGTGTTTTCTCACGACCATGTT
rJMSF014M03+          ATTTTGTAAAAACTTTCAAGTTGTGTTGTATCGACTACAGTGTTTTCTCACGACCATGTT
                      ____________________________________________________________
consensus             ATTTTGTAAAAACTTTCAAGTTGTGTTGTATCGACTACAGTGTTTTCTCACGACCATGTT
 
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rJMSF032D19+          GAAGTCAACATTAGCCAAATTTTGCCAAATTTTATGTCAAAGTTAATGCTTACATCTTAC
rJMSF014M03+          GAAGTCAACATTAGCCAAATTTTGCCAAATTTTATGTCAAAGTTAATGCTTACATCTTAC
                      ____________________________________________________________
consensus             GAAGTCAACATTAGCCAAATTTTGCCAAATTTTATGTCAAAGTTAATGCTTACATCTTAC
 
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rJMSF032D19+          TTTCCGCTTGCAGTTCCTGTTTCTACTCTGTATTGTAATTAATTACATGCTTTACCTTAG
rJMSF015J05+                                             TAATTAATTACATGCTTTACCTTAG
rJMSF014M03+          TTTCCGCTTGCAGTTCCTGTTTCTACTCTGTATTGTAATTAATTACATGCTTTACCTTAG
                      ____________________________________________________________
consensus             TTTCCGCTTGCAGTTCCTGTTTCTACTCTGTATTGTAATTAATTACATGCTTTACCTTAG
 
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rJMSF032D19+          AGACTTTTAATTTTGTAAAGAAATTGCTATTTATTTCGTTATTTACTTTGGAAGGAGGAA
rJMSF015J05+          AGACTTTTAATTTTGTAAAGAAATTGCTATTTATTTCGTTATTTACTTTGGGAGGAGGAA
rJMSF014M03+          AGACTTTTAATTTTGTAAAGAAATTGCTATTTATTTCGTTATTTACTTTGGAAGGAGGAA
                      ____________________________________________________________
consensus             AGACTTTTAATTTTGTAAAGAAATTGCTATTTATTTCGTTATTTACTTTGGAAGGAGGAA
 
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rJMSF032D19+          TAGAAATAGCAATCAATGTATTGATCTTTCTTATTCAAATTGAAATTTAGGGCAAGAAGA
rJMSF015J05+          TAGAAATAGCAATCAATGTATTGATCTTTCTTATTCAAATTGAAATTTAGGGCAAGAAGA
rJMSF014M03+          TAGAAATAGCAATCAATGTATTGATCTTTCTTATTCAAATTGAAATTTAGGGCAAGAAGA
                      ____________________________________________________________
consensus             TAGAAATAGCAATCAATGTATTGATCTTTCTTATTCAAATTGAAATTTAGGGCAAGAAGA
 
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rJMSF032D19+          CACAGAAAGAGTCAACACTGAGCCGGACTAAGCAGTTGACTGAAGAAGCTGAGCCAAGTA
rJMSF015J05+          CACAGAAAGAGTCAACACTGAGCCGGACTAAGCAGTTGACTGAAGAAGCTGAGCCAAGTA
rJMSF014M03+          CACAGAAAGAGTCAACACTGAGCCGGACTAAGCAGTTGACTGAAGAAGCTGAGCCAAGTA
                      ____________________________________________________________
consensus             CACAGAAAGAGTCAACACTGAGCCGGACTAAGCAGTTGACTGAAGAAGCTGAGCCAAGTA
 
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rJMSF032D19+          AACCAAAGCTTCAAATATACCTGGATATATTTGGGGAGCAATATGGCAAGGTTGTAGTCT
rJMSF015J05+          AACCAAAGCTTCAAATATACCTGGATATATTTGGGGAGCAATATGGCAAGGTTGTAGTCT
rJMSF014M03+          AACCAAAGCTTCAAATATACCTGGATATATTTGGGGAGCAATATGGCAAGGTTGTAGTCT
                      ____________________________________________________________
consensus             AACCAAAGCTTCAAATATACCTGGATATATTTGGGGAGCAATATGGCAAGGTTGTAGTCT
 
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rJMSF032D19+          TAACCTTTCTTTTCAAGAGACCCTTCTTTAGTACTCAGGTGGTTTGAACTGGATAGATGA
rJMSF015J05+          TAACCTTTCTTTTCAAGAGACCCTTCTTTAGTACTCAGGTGGTTTGAACTGGATAGATGA
rJMSF014M03+          TAACCTTTCTTTTCAAGAGACCCTTCTTTAGTACTCAGGTGGTTTGAACTGGATAGATGA
                      ____________________________________________________________
consensus             TAACCTTTCTTTTCAAGAGACCCTTCTTTAGTACTCAGGTGGTTTGAACTGGATAGATGA
 
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rJMSF032D19+          TGAATTTGGGAGTGCAGATTGCTATCAAGAGGTTTATATAGATGCTGAATAGTGTCTTTC
rJMSF015J05+          TGAATTTGGGAGTGCAGATTGCTATCAAGAGGTTTATATAGATGCTGAATAGTGTCTTTC
rJMSF014M03+          TGAATTTGGGAGTGCAGATTGCTATCAAGAGGTTTATATAGATGCTGAATAGTGTCTTTC
                      ____________________________________________________________
consensus             TGAATTTGGGAGTGCAGATTGCTATCAAGAGGTTTATATAGATGCTGAATAGTGTCTTTC
 
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rJMSF032D19+          AAAATTGAAGACTTTCTTGGAATTATGAAGGCTGCACAAAACGGTTCAACATCCAAGATT
rJMSF015J05+          AAAATTGAAGACTTTCTTGGAATTATGAAGGCTGCACAAAACGGTTCAACATCCAAGATT
rJMSF014M03+          AAAATTGAAGACTTTCTTGGAATTATGAAGGCTGCACAAAACGGTTCAACATCCAAGATT
                      ____________________________________________________________
consensus             AAAATTGAAGACTTTCTTGGAATTATGAAGGCTGCACAAAACGGTTCAACATCCAAGATT
 
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rJMSF032D19+          AATTTGAATTTACAGTGATGTATTTATTAATGCAAATGGCGGAACAACTTCCCACAAATT
rJMSF015J05+          AATTTGAATTTACAGTGATGTATTTATTAATGCAAATGGCGGAACAACTTCCCACAAATT
rJMSF014M03+          AATTTGAATTTACAGTGATGTATTTATTAATGCAAATGGCGGAACAACTTCCCACAAATT
                      ____________________________________________________________
consensus             AATTTGAATTTACAGTGATGTATTTATTAATGCAAATGGCGGAACAACTTCCCACAAATT
 
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rJMSF032D19+          TGGGAAACGAAAAAGGTGGTTGATAATAGATGTAGTATTTAATTCAAATACAAACACATT
rJMSF015J05+          TGGGAAACGAAAAAGGTGGTTGATAATAGATGTAGTATTTAATTCAAATACAAACACATT
rJMSF014M03+          TGGGAAACGAAAAAGGTGGTTGATAATAGATGTAGTATTTAATTCAAATACAAACACATT
                      ____________________________________________________________
consensus             TGGGAAACGAAAAAGGTGGTTGATAATAGATGTAGTATTTAATTCAAATACAAACACATT