Contig 004224:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF014I10-                                                        GCCAACACAATCGTC
                      ____________________________________________________________
consensus                                                          GCCAACACAATCGTC
 
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JMSF014I10-           CCAATTTTGTTTCATCAAAAAATTAAAACAATCTCGAAAGAAAGAAAGAAAGTAGTATTT
rJMSF014I10+               TTTGTTTCATCAAAAAATTAAANCAATCTCGAAAGAAAGAAAGAAAGTAGTATTT
                      ____________________________________________________________
consensus             CCAATTTTGTTTCATCAAAAAATTAAAACAATCTCGAAAGAAAGAAAGAAAGTAGTATTT
 
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JMSF014I10-           ATCAGAATTGAATGGCAGCCATGGCGTCTCTACATACAATAATGTTCACTAACTCAGGCA
rJMSF014I10+          ATCAGAATTGAATGGCAGCCATGGCGTCTCTACATACAATAATGTTCACTAACTCAGGCA
                      ____________________________________________________________
consensus             ATCAGAATTGAATGGCAGCCATGGCGTCTCTACATACAATAATGTTCACTAACTCAGGCA
 
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JMSF014I10-           AGAAACCGGCATCGCTGCCATGCTCAAAATTCCTGGGCACTCCGAGGAACGTGGTTACTC
rJMSF014I10+          AGAAACCGGCATCGCTGCCATGCTCAAAATTCCTGGGCACTCCGAGGAACGTGGTTACTC
                      ____________________________________________________________
consensus             AGAAACCGGCATCGCTGCCATGCTCAAAATTCCTGGGCACTCCGAGGAACGTGGTTACTC
 
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JMSF014I10-           CGAGCCCCAAGATCGCCAAGACGGCGAGGCCATTCACGGTGGTCGCCGCCGTCGGAGATG
rJMSF014I10+          CGAGCCCCAAGATCGCCAAGACGGCGAGGCCATTCACGGTGGTCGCCGCCGTCGGAGATG
                      ____________________________________________________________
consensus             CGAGCCCCAAGATCGCCAAGACGGCGAGGCCATTCACGGTGGTCGCCGCCGTCGGAGATG
 
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JMSF014I10-           TATCGGATGCCGGGACCACCTACCTGATTGCCGGTGCCGCCGCCGTGGCGTTGGTCGGGA
rJMSF014I10+          TATCGGATGCCGGGACCACCTACCTGATTGCCGGTGCCGCCGCCGTGGCGTTGGTCGGGA
                      ____________________________________________________________
consensus             TATCGGATGCCGGGACCACCTACCTGATTGCCGGTGCCGCCGCCGTGGCGTTGGTCGGGA
 
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JMSF014I10-           CTGCTTTCCCTATCTTCTTCTCCCGCAAGGACACGTGCCCGGAATGTGACGGGGCGGGTT
rJMSF014I10+          CTGCTTTCCCTATCTTCTTCTCCCGCAAGGACACGTGCCCGGAATGTGACGGGGCGGGTT
                      ____________________________________________________________
consensus             CTGCTTTCCCTATCTTCTTCTCCCGCAAGGACACGTGCCCGGAATGTGACGGGGCGGGTT
 
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JMSF014I10-           TCGTGAGGCAAGCAGGGGCGACATTGAGGGCCAATGCTGCTAGGAAAGACCAGACTCAAA
rJMSF014I10+          TCGTGAGGCAAGCAGGGGCGACATTGAGGGCCAATGCTGCTAGGAAAGACCAGACTCAAA
                      ____________________________________________________________
consensus             TCGTGAGGCAAGCAGGGGCGACATTGAGGGCCAATGCTGCTAGGAAAGACCAGACTCAAA
 
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JMSF014I10-           TTGTATGCGCTCGCTGCAATGGTCTTGGCAAGCTCAATCAAATTGACAAATAGACCTAAT
rJMSF014I10+          TTGTATGCGCTCGCTGCAATGGTCTTGGCAAGCTCAATCAAATTGACAAATAGACCTAAT
                      ____________________________________________________________
consensus             TTGTATGCGCTCGCTGCAATGGTCTTGGCAAGCTCAATCAAATTGACAAATAGACCTAAT
 
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JMSF014I10-           ACATATTCTCCACGCAAATTTTTCTTCAGATCATGAATAAAAGGTATATTTTTAATATAG
rJMSF014I10+          ACATATTCTCCACGCAAATTTTTCTTCAGATCATGAATAAAAGGTATATTTTTAATATAG
                      ____________________________________________________________
consensus             ACATATTCTCCACGCAAATTTTTCTTCAGATCATGAATAAAAGGTATATTTTTAATATAG
 
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JMSF014I10-           TAAACGTACATTATTTATGTATTGAAT                                 
rJMSF014I10+          TAAACGTACATTATTTATGTATTGAATGCACATTATTTGATAATATACAAAATATTATAT
                      ____________________________________________________________
consensus             TAAACGTACATTATTTATGTATTGAATGCACATTATTTGATAATATACAAAATATTATAT
 
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rJMSF014I10+          TTTCAGTACTCAAATAATGTATTTTTAATATATAAATAATGTGCCGTTAGTATATTAAAA
                      ____________________________________________________________
consensus             TTTCAGTACTCAAATAATGTATTTTTAATATATAAATAATGTGCCGTTAGTATATTAAAA
 
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rJMSF014I10+          ATGTACCTTTTATTTATGAATTATGATTCACACAGTTGTGTGGACCATTACACTTACGTA
                      ____________________________________________________________
consensus             ATGTACCTTTTATTTATGAATTATGATTCACACAGTTGTGTGGACCATTACACTTACGTA
 
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rJMSF014I10+          CTGTTTCATCTGTAACTTTAATGTATTCTGATGATCAAAACCTTTGGTCCAAGTGTATAT
                      ____________________________________________________________
consensus             CTGTTTCATCTGTAACTTTAATGTATTCTGATGATCAAAACCTTTGGTCCAAGTGTATAT